FFCP PHASE1:Hg19::chr8:71157595..71157616,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10499 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7669 | |||
|TSSclassifier=strong | |||
|UniProt=E5RFN9 | |||
|association_with_transcript=0bp_to_ENST00000519724_5end | |||
|cluster_id=chr8:71157595..71157616,- | |||
|coexpression_cluster_id=C1938 | |||
|description=CAGE_peak_13_at_NCOA2_5end | |||
|id=chr8:71157595..71157616,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002166;1.09e-18;3!CL:0002251;1.71e-10;20!CL:0002621;7.29e-09;3!CL:0000860;1.05e-07;33!CL:0002057;1.05e-07;33!CL:0002174;1.47e-07;1!CL:0000501;1.47e-07;1!CL:0002336;2.91e-07;1!CL:0002261;2.91e-07;1!CL:0002170;2.91e-07;1!CL:0002159;4.97e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.36e-18,3;CL:0002251,2.22e-10,20;CL:0002621,8.92e-09,3;CL:0002174,1.42e-07,1;CL:0000501,1.42e-07,1;CL:0002336,4.90e-07,1;CL:0002261,4.90e-07,1;CL:0002170,4.90e-07,1;CL:0002159,5.31e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;3.09e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.69e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.06e-21!82;UBERON:0005743!1.45e-20!86;UBERON:0000073!4.34e-20!94;UBERON:0001016!4.34e-20!94;UBERON:0000955!2.27e-17!69;UBERON:0006238!2.27e-17!69;UBERON:0002616!1.72e-16!59;UBERON:0002020!2.49e-16!34;UBERON:0003528!2.49e-16!34;UBERON:0001869!3.41e-16!32;UBERON:0001893!5.10e-16!34;UBERON:0002780!7.55e-16!41;UBERON:0001890!7.55e-16!41;UBERON:0006240!7.55e-16!41;UBERON:0003080!2.85e-15!42;UBERON:0002791!3.64e-15!33;UBERON:0001049!4.06e-15!57;UBERON:0005068!4.06e-15!57;UBERON:0006241!4.06e-15!57;UBERON:0007135!4.06e-15!57;UBERON:0000033!1.76e-14!123;UBERON:0000153!1.07e-13!129;UBERON:0007811!1.07e-13!129;UBERON:0004121!5.23e-13!169;UBERON:0000924!2.67e-12!173;UBERON:0006601!2.67e-12!173;UBERON:0003075!8.03e-12!86;UBERON:0007284!8.03e-12!86;UBERON:0002346!8.52e-11!90;UBERON:0003056!1.26e-10!61;UBERON:0000956!6.97e-10!25;UBERON:0000203!6.97e-10!25;UBERON:0002619!2.45e-09!22;UBERON:0001950!3.94e-09!20;UBERON:0002308!1.31e-08!9;UBERON:0000125!1.31e-08!9;UBERON:0002420!8.86e-07!9;UBERON:0007245!8.86e-07!9;UBERON:0010009!8.86e-07!9;UBERON:0010011!8.86e-07!9;UBERON:0000454!8.86e-07!9;UBERON:0009663!9.69e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;3.68e-14;4!UBERON:0008895;3.68e-14;4!UBERON:0003729;1.13e-11;13!UBERON:0011159;1.96e-11;5!UBERON:0000344;1.71e-10;20!UBERON:0001949;7.29e-09;3!UBERON:0005383;7.29e-09;3!UBERON:0005382;7.29e-09;3!UBERON:0003929;3.49e-08;7!UBERON:0000997;7.50e-08;1!UBERON:0005056;7.50e-08;1!UBERON:0004176;7.50e-08;1!UBERON:0003343;2.01e-07;4!UBERON:0004785;2.01e-07;4!UBERON:0001874;2.91e-07;1!UBERON:0003350;3.23e-07;8!UBERON:0000369;7.48e-07;4!UBERON:0002435;7.48e-07;4!UBERON:0000204;7.48e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,4.32e-14,4;UBERON:0008895,4.32e-14,4;UBERON:0003729,1.51e-11,13;UBERON:0011159,2.23e-11,5;UBERON:0000344,2.22e-10,20;UBERON:0010188,1.45e-09,6;UBERON:0002539,1.45e-09,6;UBERON:0008816,1.45e-09,6;UBERON:0005383,4.68e-09,3;UBERON:0005382,4.68e-09,3;UBERON:0001949,8.92e-09,3;UBERON:0000997,8.00e-08,1;UBERON:0005056,8.00e-08,1;UBERON:0003343,1.95e-07,4;UBERON:0004785,1.95e-07,4;UBERON:0001874,2.35e-07,1;UBERON:0003350,3.81e-07,8;UBERON:0000369,5.38e-07,4;UBERON:0002435,5.38e-07,4;UBERON:0000204,5.38e-07,4;UBERON:0010082,5.38e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0.568676929949686,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0.575384784644301,0.256160706529101,0,4.48169384957604,0.645484683583826,0,0,0,0,4.59125838556354,6.73950956859797,2.55734850319616,0.329851300186716,0,0,0.870627715885752,0,0,0.251248665256743,0,0,6.05399502633369,1.84138817993782,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0,0.933633106199299,0.269421344139376,0.490385709340376,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.386521706326594,1.09098448236334,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.491953754172454,0.171567810298526,1.31700342490351,0,0,1.01847289674383,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,1.34385702559088,1.13420077793909,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0.256686072559497,0.508189248444927,1.30139853857622,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0.229628896329213,0.182091168006717,0.262248829918848,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.638063562472921,0.10115778085555,0,0,0,1.23213432070436,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,3.65570234446927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0.781552381608161,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.703347082052564,0.111308705022906,0,0,0,0,0.503865495708552,0.20453736500431,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0.227586896570999,0,0,0,0.583209226766509,0,1.77148277162768,0.844175070377856,0,0.110579259931225,0,0.658156191461918,0,0.139423744278603,0,0,0,0.0897576444097721,0.108647371922008,0,0.183195186803725,0,1.02193298195737,0.156980256395025,0.166211681900156,0,0,0,0,0.635746315921515,0,0,0,1.29833183845255,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0,0,1.53036380815245,0.126373159256976,5.41164309892173,0.311064574191741,0,0,0,0,0,0,0,8.03537658797897,1.65412492502765,0,0,0,0,0,0,0,2.25980740780532,0,0,1.2029051231617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0.600420288709789,0.136905378891993,0,2.57859264851974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0.137539436597234,0.415440338029185,0,0,0.91124334987037,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.511164065356265,0.113312091520126,0.146552233678082,0,0.387848869084652,0.39669780522807,0,0,0,0,0,0,0,0,35.7471104351302,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0,0,0.496771223531068,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0.63718706865481,0,0,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0.928067519756987,0,0,0,0,0,0,0.214441591374926,0,0,1.62065732026684,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0.607719912354764,0.829550616910385,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0.323474434190045,0.314531883711793,0,0,0,0,0,0,0,0.80057074828547,0,0,0.834979926253974,0,0.798169295285756,0.41023272848151,0,0.207471757392654,0.322951291263702,0,8.4407037910882,0,8.25428693347556,0.346576998451015,0,0,0,0,0,0,0,0,0.147856086217045,0.405225507710368,0,0.206686796501184,0.570742291745161,0,0,0,0,0.383287282918786,0,0.336283722218824,0,0,0,0,0,0.271878931907327,0.855046056317038,0,0,0,1.57115589916002,0.280272163313789,0.913158720509496,0,0,0.357382720883282,0.94808167039636,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0.118920090777569,0,3.07833446887202,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.339957450954573,0.872701380680755,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.757786982182394,0.267964130156178,0,0.517164979309476,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p13@NCOA2 | |||
}} |
Latest revision as of 00:06, 19 September 2015
Short description: | p13@NCOA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NCOA2_5end |
Coexpression cluster: | C1938_malignant_epidermoid_prostate_oral_large_anaplastic_ductal |
Association with transcript: | 0bp_to_ENST00000519724_5end |
EntrezGene: | NCOA2 |
HGNC: | 7669 |
UniProt: | E5RFN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.36e-18 | 3 |
epithelial cell of alimentary canal | 2.22e-10 | 20 |
gingival epithelial cell | 8.92e-09 | 3 |
follicular cell of ovary | 1.42e-07 | 1 |
granulosa cell | 1.42e-07 | 1 |
buccal mucosa cell | 4.90e-07 | 1 |
endothelial cell of viscerocranial mucosa | 4.90e-07 | 1 |
keratinized cell of the oral mucosa | 4.90e-07 | 1 |
general ecto-epithelial cell | 5.31e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 4.32e-14 | 4 |
splanchnocranium | 4.32e-14 | 4 |
mouth mucosa | 1.51e-11 | 13 |
primary subdivision of cranial skeletal system | 2.23e-11 | 5 |
mucosa | 2.22e-10 | 20 |
protuberance | 1.45e-09 | 6 |
pharyngeal arch | 1.45e-09 | 6 |
embryonic head | 1.45e-09 | 6 |
caudate-putamen | 4.68e-09 | 3 |
dorsal striatum | 4.68e-09 | 3 |
gingival epithelium | 8.92e-09 | 3 |
mammalian vulva | 8.00e-08 | 1 |
external female genitalia | 8.00e-08 | 1 |
mucosa of oral region | 1.95e-07 | 4 |
respiratory system mucosa | 1.95e-07 | 4 |
putamen | 2.35e-07 | 1 |
epithelium of mucosa | 3.81e-07 | 8 |
corpus striatum | 5.38e-07 | 4 |
striatum | 5.38e-07 | 4 |
ventral part of telencephalon | 5.38e-07 | 4 |
future corpus striatum | 5.38e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.69e-11 | 14 |