FFCP PHASE1:Mm9::chr5:120120847..120120853,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:120120847..120120853,-|id=chr5:120120847..120120853,-|ontology_enrichment_celltype=CL:0002563!1.48e-07!9;CL:0002251!1.48e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,3.56e-17,9;CL:0002251,3.56e-17,9;CL:0000239,2.24e-15,6;CL:0000677,2.24e-15,6;CL:0000584,2.24e-15,6;CL:0000075,4.67e-13,7;CL:0000066,7.86e-10,25;CL:0002076,1.10e-09,15;CL:0000107,2.09e-08,9;CL:0000682,1.53e-07,3;CL:0000223,6.88e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.68e-11!15;UBERON:0001242!3.01e-10!13;UBERON:0000060!3.01e-10!13;UBERON:0001262!3.01e-10!13;UBERON:0004786!3.01e-10!13;UBERON:0003350!1.48e-07!9;UBERON:0004808!1.48e-07!9;UBERON:0001277!1.48e-07!9;UBERON:0000160!1.85e-07!43;UBERON:0005157!3.41e-07!27;UBERON:0003064!4.33e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0001242,6.52e-25,13;UBERON:0001262,6.52e-25,13;UBERON:0004786,6.52e-25,13;UBERON:0000344,8.75e-25,15;UBERON:0000160,5.00e-21,31;UBERON:0003350,3.56e-17,9;UBERON:0004808,3.56e-17,9;UBERON:0001277,3.56e-17,9;UBERON:0004923,2.49e-14,24;UBERON:0000485,9.07e-14,11;UBERON:0005409,2.30e-12,47;UBERON:0002108,1.43e-08,4;UBERON:0002410,2.09e-08,9;UBERON:0010313,1.12e-07,3;UBERON:0002342,1.12e-07,3;UBERON:0002005,1.12e-07,3;UBERON:0005428,1.12e-07,3;UBERON:0005062,1.12e-07,3;UBERON:0000331,6.63e-07,3;UBERON:0002116,6.63e-07,3;UBERON:0001204,6.63e-07,3;UBERON:0001168,6.63e-07,3;UBERON:0000010,9.40e-07,11|phase1_expression=0.160148847104794,12.9120900826564,12.2849794635175,27.5242432289215,49.087781534742,5.70789524500425,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.639969691173627,1.83527424853736,4.01962374880514,3.87685796543167,1.939241094173,1.71021077510736,1.26015064879965,2.88249663851896,0,0,0,2.88851619751275,0.166234645358492,4.90006455029686,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0.919218786610021,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,0.5709193985953,0,1.48442139064825,1.21439728736295,0.304465478312141,2.07553947530453,0.753613202763113,0.23517741427141,0.753999547978053,0,0,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0.149790639404823,0,0,0,0,0,0,0.407357455401265,0.746441823660558,5.81262344397452,0,0.650602214813519,0.229902104433473,0.180062129805349,0.30140963567143,0.0680364991513279,1.0249097622788,0.374806898238915,0,0,0,0.351902248327898,0,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.584799949701329,0,0,0,0,8.92130714056255,4.23120906661671,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0,0.760902504450237,2.37264530772256,0.164698954724011,0.251335208800269,0,0.19496408711912,6.29173586057955,1.72910439899755,0.597423819763102,0.948339504765408,0.685491075658373,0,0.203651327845314,0.775809948670503,0,0.189709611372772,0.147610147979602,0,0,0.592905254174298,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0,0.274561413188081,0,0,0.624075346229121,0,0.538192240565737,0.964887042726734,0.369506380333209,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.502518772325447,0.238043640886014,0.195133647857799,0.157635144106191,0,0.797273843287435,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0,0,0.117211686592203,0.491804836130026,0,4.41711507182759,2.34263246577983,3.87762115919038,1.43381278771531,0.891194696329576,1.69845918473299,0,0.876767573733936,2.76701444562566,0,0.425820255624806,1.6025904330053,0.162886959353576,1.15479086080775,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0,0,0,0,1.8006109403131,6.20921682157222,3.00071849044229,0.177340233642274,0.356737635204141,0.493647061806363,0.913394847343798,0.469343416127421,0,8.38007912608855,0,0,0,0,0,1.45740418314925,0,0,0,0.370389054739423,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0,0.785267825952089,0.129614973291793,0,0,0,0,0.388902376688095,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0.680191150845634,0.221985953374065,0,0.167884616364078,0.965947970160952,0.187682475451182,0.183151624267265,0,7.02200945649509,0,0,0,0,0,0,0,0,0,0,0.62272408550506,0.399024873401031,0.341467211508268,0.972426868273176,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0.282328141245992,0.423073039458382,0,0.263069711437843,0,0,0.237270036248348,0.394017929502254,0,0.154936841185966,0.385813221962283,0,0,0,0,0,0|short_description=p@chr5:120120847..120120853,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:120120847..120120853,- | |||
|description=CAGE_peak_at_chr5:120120847..120120853,- | |||
|id=chr5:120120847..120120853,- | |||
|ontology_enrichment_celltype=CL:0002563!1.48e-07!9;CL:0002251!1.48e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.56e-17,9;CL:0002251,3.56e-17,9;CL:0000239,2.24e-15,6;CL:0000677,2.24e-15,6;CL:0000584,2.24e-15,6;CL:0000075,4.67e-13,7;CL:0000066,7.86e-10,25;CL:0002076,1.10e-09,15;CL:0000107,2.09e-08,9;CL:0000682,1.53e-07,3;CL:0000223,6.88e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.68e-11!15;UBERON:0001242!3.01e-10!13;UBERON:0000060!3.01e-10!13;UBERON:0001262!3.01e-10!13;UBERON:0004786!3.01e-10!13;UBERON:0003350!1.48e-07!9;UBERON:0004808!1.48e-07!9;UBERON:0001277!1.48e-07!9;UBERON:0000160!1.85e-07!43;UBERON:0005157!3.41e-07!27;UBERON:0003064!4.33e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,6.52e-25,13;UBERON:0001262,6.52e-25,13;UBERON:0004786,6.52e-25,13;UBERON:0000344,8.75e-25,15;UBERON:0000160,5.00e-21,31;UBERON:0003350,3.56e-17,9;UBERON:0004808,3.56e-17,9;UBERON:0001277,3.56e-17,9;UBERON:0004923,2.49e-14,24;UBERON:0000485,9.07e-14,11;UBERON:0005409,2.30e-12,47;UBERON:0002108,1.43e-08,4;UBERON:0002410,2.09e-08,9;UBERON:0010313,1.12e-07,3;UBERON:0002342,1.12e-07,3;UBERON:0002005,1.12e-07,3;UBERON:0005428,1.12e-07,3;UBERON:0005062,1.12e-07,3;UBERON:0000331,6.63e-07,3;UBERON:0002116,6.63e-07,3;UBERON:0001204,6.63e-07,3;UBERON:0001168,6.63e-07,3;UBERON:0000010,9.40e-07,11 | |||
|phase1_expression=0.160148847104794,12.9120900826564,12.2849794635175,27.5242432289215,49.087781534742,5.70789524500425,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.639969691173627,1.83527424853736,4.01962374880514,3.87685796543167,1.939241094173,1.71021077510736,1.26015064879965,2.88249663851896,0,0,0,2.88851619751275,0.166234645358492,4.90006455029686,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0.919218786610021,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,0.5709193985953,0,1.48442139064825,1.21439728736295,0.304465478312141,2.07553947530453,0.753613202763113,0.23517741427141,0.753999547978053,0,0,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0.149790639404823,0,0,0,0,0,0,0.407357455401265,0.746441823660558,5.81262344397452,0,0.650602214813519,0.229902104433473,0.180062129805349,0.30140963567143,0.0680364991513279,1.0249097622788,0.374806898238915,0,0,0,0.351902248327898,0,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.584799949701329,0,0,0,0,8.92130714056255,4.23120906661671,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0,0.760902504450237,2.37264530772256,0.164698954724011,0.251335208800269,0,0.19496408711912,6.29173586057955,1.72910439899755,0.597423819763102,0.948339504765408,0.685491075658373,0,0.203651327845314,0.775809948670503,0,0.189709611372772,0.147610147979602,0,0,0.592905254174298,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0,0.274561413188081,0,0,0.624075346229121,0,0.538192240565737,0.964887042726734,0.369506380333209,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.502518772325447,0.238043640886014,0.195133647857799,0.157635144106191,0,0.797273843287435,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0,0,0.117211686592203,0.491804836130026,0,4.41711507182759,2.34263246577983,3.87762115919038,1.43381278771531,0.891194696329576,1.69845918473299,0,0.876767573733936,2.76701444562566,0,0.425820255624806,1.6025904330053,0.162886959353576,1.15479086080775,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0,0,0,0,1.8006109403131,6.20921682157222,3.00071849044229,0.177340233642274,0.356737635204141,0.493647061806363,0.913394847343798,0.469343416127421,0,8.38007912608855,0,0,0,0,0,1.45740418314925,0,0,0,0.370389054739423,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0,0.785267825952089,0.129614973291793,0,0,0,0,0.388902376688095,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0.680191150845634,0.221985953374065,0,0.167884616364078,0.965947970160952,0.187682475451182,0.183151624267265,0,7.02200945649509,0,0,0,0,0,0,0,0,0,0,0.62272408550506,0.399024873401031,0.341467211508268,0.972426868273176,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0.282328141245992,0.423073039458382,0,0.263069711437843,0,0,0.237270036248348,0.394017929502254,0,0.154936841185966,0.385813221962283,0,0,0,0,0,0 | |||
|short_description=p@chr5:120120847..120120853,- | |||
}} |
Latest revision as of 04:06, 6 August 2015
Short description: | p@chr5:120120847..120120853, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:120120847..120120853, - |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.56e-17 | 9 |
epithelial cell of alimentary canal | 3.56e-17 | 9 |
brush border epithelial cell | 2.24e-15 | 6 |
gut absorptive cell | 2.24e-15 | 6 |
enterocyte | 2.24e-15 | 6 |
columnar/cuboidal epithelial cell | 4.67e-13 | 7 |
epithelial cell | 7.86e-10 | 25 |
endo-epithelial cell | 1.10e-09 | 15 |
autonomic neuron | 2.09e-08 | 9 |
M cell of gut | 1.53e-07 | 3 |
endodermal cell | 6.88e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 6.52e-25 | 13 |
wall of intestine | 6.52e-25 | 13 |
gastrointestinal system mucosa | 6.52e-25 | 13 |
mucosa | 8.75e-25 | 15 |
intestine | 5.00e-21 | 31 |
epithelium of mucosa | 3.56e-17 | 9 |
gastrointestinal system epithelium | 3.56e-17 | 9 |
intestinal epithelium | 3.56e-17 | 9 |
organ component layer | 2.49e-14 | 24 |
simple columnar epithelium | 9.07e-14 | 11 |
gastrointestinal system | 2.30e-12 | 47 |
small intestine | 1.43e-08 | 4 |
autonomic nervous system | 2.09e-08 | 9 |
neural crest-derived structure | 1.12e-07 | 3 |
neural crest | 1.12e-07 | 3 |
enteric nervous system | 1.12e-07 | 3 |
vagal neural crest | 1.12e-07 | 3 |
neural fold | 1.12e-07 | 3 |
ileal mucosa | 6.63e-07 | 3 |
ileum | 6.63e-07 | 3 |
mucosa of small intestine | 6.63e-07 | 3 |
wall of small intestine | 6.63e-07 | 3 |
peripheral nervous system | 9.40e-07 | 11 |