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FFCP PHASE1:Mm9::chr5:52957429..52957457,-: Difference between revisions

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{{FFCP|EntrezGene=246316|HGNC=|MCL_coexpression_id=1|UniProt=Q8K4Z0|association_with_transcript=26bp_to_ENSMUST00000113928_5end|description=CAGE_peak_4_at_Lgi2_5end|id=chr5:52957429..52957457,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.20e-13!71;UBERON:0003075!1.20e-13!71;UBERON:0007284!1.20e-13!71;UBERON:0000033!1.25e-13!63;UBERON:0001049!1.30e-11!52;UBERON:0005068!1.30e-11!52;UBERON:0006241!1.30e-11!52;UBERON:0007135!1.30e-11!52;UBERON:0000955!3.17e-11!50;UBERON:0006238!3.17e-11!50;UBERON:0003056!7.74e-11!49;UBERON:0002616!1.11e-10!49;UBERON:0001017!1.09e-08!73;UBERON:0005743!1.09e-08!73;UBERON:0002021!1.31e-08!10;UBERON:0000411!1.31e-08!10;UBERON:0001950!1.31e-08!10;UBERON:0002020!1.63e-08!34;UBERON:0004121!1.77e-08!102;UBERON:0000924!1.77e-08!102;UBERON:0006601!1.77e-08!102;UBERON:0000073!5.95e-08!75;UBERON:0001016!5.95e-08!75;UBERON:0003080!7.14e-08!40;UBERON:0002780!2.34e-07!39;UBERON:0001890!2.34e-07!39;UBERON:0006240!2.34e-07!39;UBERON:0007811!2.40e-07!86;UBERON:0000153!9.95e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.28e-23,54;UBERON:0002346,6.50e-23,64;UBERON:0003075,6.50e-23,64;UBERON:0007284,6.50e-23,64;UBERON:0001049,5.75e-21,52;UBERON:0005068,5.75e-21,52;UBERON:0006241,5.75e-21,52;UBERON:0007135,5.75e-21,52;UBERON:0000955,3.31e-20,47;UBERON:0006238,3.31e-20,47;UBERON:0002021,3.61e-19,10;UBERON:0000411,3.61e-19,10;UBERON:0001950,3.61e-19,10;UBERON:0010371,5.00e-19,73;UBERON:0002616,5.97e-19,46;UBERON:0001017,4.03e-18,73;UBERON:0003056,7.29e-18,49;UBERON:0004121,1.97e-17,95;UBERON:0000924,1.97e-17,95;UBERON:0006601,1.97e-17,95;UBERON:0001016,2.05e-17,75;UBERON:0003080,1.25e-14,40;UBERON:0010314,2.25e-14,92;UBERON:0002020,3.31e-14,34;UBERON:0003528,8.64e-14,29;UBERON:0002791,8.64e-14,29;UBERON:0001893,8.64e-14,29;UBERON:0002780,1.95e-13,39;UBERON:0001890,1.95e-13,39;UBERON:0006240,1.95e-13,39;UBERON:0002619,2.79e-12,17;UBERON:0000956,2.14e-11,21;UBERON:0001869,2.14e-11,21;UBERON:0000203,2.14e-11,21;UBERON:0002950,6.23e-08,4;UBERON:0001891,6.23e-08,4;UBERON:0009616,6.23e-08,4;UBERON:0010286,6.23e-08,4;UBERON:0003076,3.64e-07,12;UBERON:0003057,3.64e-07,12;UBERON:0000025,6.17e-07,114|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,0,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,1.14260393761521,2.65042249141936,0,0,0,3.30347642998166,3.19218345212969,2.76491759861238,0.659431438650969,0.457438218012048,0,4.4669279840221,2.8138130501584,3.66715794664344,0.589257170947335,0.854230084794618,0.559198337475902,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.867426633830679,0,1.15307748628029,0.150722640552623,0.23517741427141,0.251333182659351,0,0.289198713839823,0,0.161766849947409,0,0,0,7.31951992528868,5.02672096352292,0,0,0,0,4.19413790333504,2.28750301409313,0.879580464790051,6.08385120672968,5.62574006126727,4.1557608911912,3.40706652442291,1.01839363850316,0.248813941220186,0,0.210441855886474,0.390361328888111,0.459804208866946,1.62055916824814,1.20563854268572,1.49680298132921,1.66547836370305,0.749613796477831,1.81092359517311,0,0,0.527853372491847,0.657587197282725,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0.134206418760372,2.10289948564127,0.308713837137853,0,0.264450566663544,0.853153002140936,0.696710015581316,0.257734922644187,0.605050573870028,0.444756087689741,0.951128130562796,0,0.494096864172033,0,0.795825888164603,0.19496408711912,1.79763881730844,0.216138049874694,0,0.569003702859245,0.571242563048644,1.1270773567308,0.610953983535943,0.193952487167626,0.280543279561274,0.505892296994058,0.147610147979602,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,1.24815069245824,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0.509235257325564,0,0,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0,0,0.433947175744535,0,0,0,0,8.34863067936518,7.97039468826982,0,0,0.631016438832513,0,0,0,0,0,0,0,0,2.89189184779626,0.425820255624806,2.31485284767432,2.28041743095006,0.164970122972535,0,0.728341908464944,0.906970670894253,1.13163047853539,2.36241514304618,1.84461088766356,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0,1.24858172321449,0.658196082408484,0.304464949114599,0,0,0,0.49465875882444,0,0.0603129249281559,0,0.164140899745061,0.291480836629851,7.6024373824309,0,0.412773735926445,0.555583582109135,0,0,0,0,0,0,0,0.474503990371703,1.62655573701479,0.972048067396211,0.836353184057875,0.436725127492355,0.269728692769641,0.495920734352016,0,0,0,0,0.149516546043979,0.330916980914195,1.16670713006429,1.29159823477731,0.337912250981556,0.469428954583016,0.781226309063701,0.524296722128554,0,0,0,0.202725215290164,0.102710957164827,0.51968329191118,0,0,0.240390899039938,0,0.201932899896295,0.304827226619999,0.201652370273681,0.0974578807397524,0,0,0,0,0,0,0,0.375364950902364,0,0.214368379079066,0,6.7770221114048,5.06357760157895,5.72895513439397,11.3423100346834,8.22099023724771,2.2661816921691,11.4753825039407,6.75481804836331,5.43770890781046,5.69536342927002,0,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0.183843508450014,0.888986911206461,0.412070114477788,0.320919209591815,0.758091635291392,0.760437899670719,0.377252682772152,0.37456602987953,0.128050304809739,0.459483751644906,0,0.347652977834566,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.581385666529314,0.282328141245992,0.25384382367503,0.914639864363863,0.263069711437843,0.407412341537585,1.12228454331548,0.355905054372522,0.394017929502254,0.409231043169689,0.619747364743864,0.385813221962283,0.999242311751784,0.701794825336225,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p4@Lgi2}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=246316
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8K4Z0
|association_with_transcript=26bp_to_ENSMUST00000113928_5end
|cluster_id=chr5:52957429..52957457,-
|description=CAGE_peak_4_at_Lgi2_5end
|id=chr5:52957429..52957457,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.20e-13!71;UBERON:0003075!1.20e-13!71;UBERON:0007284!1.20e-13!71;UBERON:0000033!1.25e-13!63;UBERON:0001049!1.30e-11!52;UBERON:0005068!1.30e-11!52;UBERON:0006241!1.30e-11!52;UBERON:0007135!1.30e-11!52;UBERON:0000955!3.17e-11!50;UBERON:0006238!3.17e-11!50;UBERON:0003056!7.74e-11!49;UBERON:0002616!1.11e-10!49;UBERON:0001017!1.09e-08!73;UBERON:0005743!1.09e-08!73;UBERON:0002021!1.31e-08!10;UBERON:0000411!1.31e-08!10;UBERON:0001950!1.31e-08!10;UBERON:0002020!1.63e-08!34;UBERON:0004121!1.77e-08!102;UBERON:0000924!1.77e-08!102;UBERON:0006601!1.77e-08!102;UBERON:0000073!5.95e-08!75;UBERON:0001016!5.95e-08!75;UBERON:0003080!7.14e-08!40;UBERON:0002780!2.34e-07!39;UBERON:0001890!2.34e-07!39;UBERON:0006240!2.34e-07!39;UBERON:0007811!2.40e-07!86;UBERON:0000153!9.95e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.28e-23,54;UBERON:0002346,6.50e-23,64;UBERON:0003075,6.50e-23,64;UBERON:0007284,6.50e-23,64;UBERON:0001049,5.75e-21,52;UBERON:0005068,5.75e-21,52;UBERON:0006241,5.75e-21,52;UBERON:0007135,5.75e-21,52;UBERON:0000955,3.31e-20,47;UBERON:0006238,3.31e-20,47;UBERON:0002021,3.61e-19,10;UBERON:0000411,3.61e-19,10;UBERON:0001950,3.61e-19,10;UBERON:0010371,5.00e-19,73;UBERON:0002616,5.97e-19,46;UBERON:0001017,4.03e-18,73;UBERON:0003056,7.29e-18,49;UBERON:0004121,1.97e-17,95;UBERON:0000924,1.97e-17,95;UBERON:0006601,1.97e-17,95;UBERON:0001016,2.05e-17,75;UBERON:0003080,1.25e-14,40;UBERON:0010314,2.25e-14,92;UBERON:0002020,3.31e-14,34;UBERON:0003528,8.64e-14,29;UBERON:0002791,8.64e-14,29;UBERON:0001893,8.64e-14,29;UBERON:0002780,1.95e-13,39;UBERON:0001890,1.95e-13,39;UBERON:0006240,1.95e-13,39;UBERON:0002619,2.79e-12,17;UBERON:0000956,2.14e-11,21;UBERON:0001869,2.14e-11,21;UBERON:0000203,2.14e-11,21;UBERON:0002950,6.23e-08,4;UBERON:0001891,6.23e-08,4;UBERON:0009616,6.23e-08,4;UBERON:0010286,6.23e-08,4;UBERON:0003076,3.64e-07,12;UBERON:0003057,3.64e-07,12;UBERON:0000025,6.17e-07,114
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,0,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,1.14260393761521,2.65042249141936,0,0,0,3.30347642998166,3.19218345212969,2.76491759861238,0.659431438650969,0.457438218012048,0,4.4669279840221,2.8138130501584,3.66715794664344,0.589257170947335,0.854230084794618,0.559198337475902,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.867426633830679,0,1.15307748628029,0.150722640552623,0.23517741427141,0.251333182659351,0,0.289198713839823,0,0.161766849947409,0,0,0,7.31951992528868,5.02672096352292,0,0,0,0,4.19413790333504,2.28750301409313,0.879580464790051,6.08385120672968,5.62574006126727,4.1557608911912,3.40706652442291,1.01839363850316,0.248813941220186,0,0.210441855886474,0.390361328888111,0.459804208866946,1.62055916824814,1.20563854268572,1.49680298132921,1.66547836370305,0.749613796477831,1.81092359517311,0,0,0.527853372491847,0.657587197282725,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0.134206418760372,2.10289948564127,0.308713837137853,0,0.264450566663544,0.853153002140936,0.696710015581316,0.257734922644187,0.605050573870028,0.444756087689741,0.951128130562796,0,0.494096864172033,0,0.795825888164603,0.19496408711912,1.79763881730844,0.216138049874694,0,0.569003702859245,0.571242563048644,1.1270773567308,0.610953983535943,0.193952487167626,0.280543279561274,0.505892296994058,0.147610147979602,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,1.24815069245824,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0.509235257325564,0,0,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0,0,0.433947175744535,0,0,0,0,8.34863067936518,7.97039468826982,0,0,0.631016438832513,0,0,0,0,0,0,0,0,2.89189184779626,0.425820255624806,2.31485284767432,2.28041743095006,0.164970122972535,0,0.728341908464944,0.906970670894253,1.13163047853539,2.36241514304618,1.84461088766356,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0,1.24858172321449,0.658196082408484,0.304464949114599,0,0,0,0.49465875882444,0,0.0603129249281559,0,0.164140899745061,0.291480836629851,7.6024373824309,0,0.412773735926445,0.555583582109135,0,0,0,0,0,0,0,0.474503990371703,1.62655573701479,0.972048067396211,0.836353184057875,0.436725127492355,0.269728692769641,0.495920734352016,0,0,0,0,0.149516546043979,0.330916980914195,1.16670713006429,1.29159823477731,0.337912250981556,0.469428954583016,0.781226309063701,0.524296722128554,0,0,0,0.202725215290164,0.102710957164827,0.51968329191118,0,0,0.240390899039938,0,0.201932899896295,0.304827226619999,0.201652370273681,0.0974578807397524,0,0,0,0,0,0,0,0.375364950902364,0,0.214368379079066,0,6.7770221114048,5.06357760157895,5.72895513439397,11.3423100346834,8.22099023724771,2.2661816921691,11.4753825039407,6.75481804836331,5.43770890781046,5.69536342927002,0,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0.183843508450014,0.888986911206461,0.412070114477788,0.320919209591815,0.758091635291392,0.760437899670719,0.377252682772152,0.37456602987953,0.128050304809739,0.459483751644906,0,0.347652977834566,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.581385666529314,0.282328141245992,0.25384382367503,0.914639864363863,0.263069711437843,0.407412341537585,1.12228454331548,0.355905054372522,0.394017929502254,0.409231043169689,0.619747364743864,0.385813221962283,0.999242311751784,0.701794825336225,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843
|short_description=p4@Lgi2
}}

Latest revision as of 01:54, 26 September 2015

Short description:p4@Lgi2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Lgi2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 26bp_to_ENSMUST00000113928_5end
EntrezGene:Lgi2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Lgi2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D56.08
cortex, neonate N30.CNhs11107.1392-42F25.63
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.35
medulla oblongata, neonate N30.CNhs11200.1396-42A37.97
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C97.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.28e-2354
neurectoderm6.50e-2364
neural plate6.50e-2364
presumptive neural plate6.50e-2364
neural tube5.75e-2152
neural rod5.75e-2152
future spinal cord5.75e-2152
neural keel5.75e-2152
brain3.31e-2047
future brain3.31e-2047
occipital lobe3.61e-1910
visual cortex3.61e-1910
neocortex3.61e-1910
ecto-epithelium5.00e-1973
regional part of brain5.97e-1946
central nervous system4.03e-1873
pre-chordal neural plate7.29e-1849
ectoderm-derived structure1.97e-1795
ectoderm1.97e-1795
presumptive ectoderm1.97e-1795
nervous system2.05e-1775
anterior neural tube1.25e-1440
structure with developmental contribution from neural crest2.25e-1492
gray matter3.31e-1434
brain grey matter8.64e-1429
regional part of telencephalon8.64e-1429
telencephalon8.64e-1429
regional part of forebrain1.95e-1339
forebrain1.95e-1339
future forebrain1.95e-1339
regional part of cerebral cortex2.79e-1217
cerebral cortex2.14e-1121
cerebral hemisphere2.14e-1121
pallium2.14e-1121
regional part of midbrain6.23e-084
midbrain6.23e-084
presumptive midbrain6.23e-084
midbrain neural tube6.23e-084
posterior neural tube3.64e-0712
chordal neural plate3.64e-0712
tube6.17e-07114
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