FFCP PHASE1:Mm9::chr10:94879617..94879627,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:94879617..94879627,+
|short_description=p3@5730420D15Rik
|description=CAGE_peak_3_at_5730420D15Rik_5end
|association_with_transcript=-381bp_to_ENSMUST0000...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=70523 | |EntrezGene=70523 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-381bp_to_ENSMUST00000133183,NR_045338,NR_045339,uc007gwh.1_5end | |||
|cluster_id=chr10:94879617..94879627,+ | |||
|description=CAGE_peak_3_at_5730420D15Rik_5end | |||
|id=chr10:94879617..94879627,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.32e-13!25;CL:0000223!1.98e-09!20;CL:0002563!4.15e-09!9;CL:0002251!4.15e-09!9;CL:0000075!5.62e-08!7;CL:0002321!2.83e-07!70;CL:0000220!2.83e-07!70;CL:0000239!5.20e-07!6;CL:0000677!5.20e-07!6;CL:0000212!5.20e-07!6;CL:0000584!5.20e-07!6;CL:0002076!7.34e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.12e-14,25;CL:0000223,3.24e-12,20;CL:0000213,1.83e-11,1;CL:0002078,1.83e-11,1;CL:0000115,1.83e-11,1;CL:0002262,1.83e-11,1;CL:1000398,1.83e-11,1;CL:0000057,4.58e-11,1;CL:0000632,4.58e-11,1;CL:0002563,3.46e-10,9;CL:0002251,3.46e-10,9;CL:0000182,8.42e-09,5;CL:0000239,2.36e-07,6;CL:0000677,2.36e-07,6;CL:0000584,2.36e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!6.38e-11!11;UBERON:0003350!4.15e-09!9;UBERON:0004808!4.15e-09!9;UBERON:0001277!4.15e-09!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.83e-11,1;UBERON:0001281,1.83e-11,1;UBERON:0000353,1.83e-11,1;UBERON:0003497,1.83e-11,1;UBERON:0003909,1.83e-11,1;UBERON:0003928,1.83e-11,1;UBERON:0003835,1.83e-11,1;UBERON:0003513,1.83e-11,1;UBERON:0001280,1.83e-11,1;UBERON:0004647,1.83e-11,1;UBERON:0002294,1.83e-11,1;UBERON:0001173,1.83e-11,1;UBERON:0004912,1.83e-11,1;UBERON:0005171,1.83e-11,1;UBERON:0003350,3.46e-10,9;UBERON:0004808,3.46e-10,9;UBERON:0001277,3.46e-10,9;UBERON:0000485,1.90e-08,11;UBERON:0001242,3.08e-07,13;UBERON:0001262,3.08e-07,13;UBERON:0004786,3.08e-07,13 | |||
|phase1_expression=0.640595388419176,0.697950815278722,1.36499771816861,0.90739263392049,0.500895729946347,1.6787927191189,0.700837921786577,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88652807281682,4.17919662622297,0.159992422793407,0,2.29692785646008,0.430761996159075,0.646413698057667,0,0,0.221730510655305,0,0,0,0.866554859253824,0.166234645358492,1.22501613757421,0,0,0,0,0,0,0,0,0.550640256485045,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0.633831403506179,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0.244981598429908,0.287536413054709,0.919218786610021,0,0,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0.142371680799103,0,0.075726193333184,0,8.40607017234866,1.72084775396277,0,0.539703191637817,0.649776417447669,1.34408066129201,0,0.170430322578058,0.259786004602869,0.35333957451034,0.985903938436763,0,0,0,0.649473123033642,0.506719730950197,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0.390267295715598,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0.238968797952552,0.445597348164788,0,0,0.876767573733936,0.790575555893047,0,0.425820255624806,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0,0.177340233642274,0.356737635204141,0,0.304464949114599,0,0.21183207086382,0,0.32977250588296,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0.506868376472335,0,0.5208175393758,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0.640595388419176,0.697950815278722,1.36499771816861,0.90739263392049,0.500895729946347,1.6787927191189,0.700837921786577,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88652807281682,4.17919662622297,0.159992422793407,0,2.29692785646008,0.430761996159075,0.646413698057667,0,0,0.221730510655305,0,0,0,0.866554859253824,0.166234645358492,1.22501613757421,0,0,0,0,0,0,0,0,0.550640256485045,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0.633831403506179,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0.244981598429908,0.287536413054709,0.919218786610021,0,0,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0.142371680799103,0,0.075726193333184,0,8.40607017234866,1.72084775396277,0,0.539703191637817,0.649776417447669,1.34408066129201,0,0.170430322578058,0.259786004602869,0.35333957451034,0.985903938436763,0,0,0,0.649473123033642,0.506719730950197,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0.390267295715598,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0.238968797952552,0.445597348164788,0,0,0.876767573733936,0.790575555893047,0,0.425820255624806,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0,0.177340233642274,0.356737635204141,0,0.304464949114599,0,0.21183207086382,0,0.32977250588296,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0.506868376472335,0,0.5208175393758,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p3@5730420D15Rik | |||
}} | }} |
Latest revision as of 15:02, 26 September 2015
Short description: | p3@5730420D15Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_5730420D15Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | -381bp_to_ENSMUST00000133183, NR_045338, NR_045339, uc007gwh.1_5end |
EntrezGene: | 5730420D15Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.12e-14 | 25 |
endodermal cell | 3.24e-12 | 20 |
lining cell | 1.83e-11 | 1 |
meso-epithelial cell | 1.83e-11 | 1 |
endothelial cell | 1.83e-11 | 1 |
endothelial cell of sinusoid | 1.83e-11 | 1 |
endothelial cell of hepatic sinusoid | 1.83e-11 | 1 |
fibroblast | 4.58e-11 | 1 |
hepatic stellate cell | 4.58e-11 | 1 |
intestinal epithelial cell | 3.46e-10 | 9 |
epithelial cell of alimentary canal | 3.46e-10 | 9 |
hepatocyte | 8.42e-09 | 5 |
brush border epithelial cell | 2.36e-07 | 6 |
gut absorptive cell | 2.36e-07 | 6 |
enterocyte | 2.36e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.83e-11 | 1 |
hepatic sinusoid | 1.83e-11 | 1 |
parenchyma | 1.83e-11 | 1 |
abdomen blood vessel | 1.83e-11 | 1 |
sinusoid | 1.83e-11 | 1 |
digestive system duct | 1.83e-11 | 1 |
abdominal segment blood vessel | 1.83e-11 | 1 |
trunk blood vessel | 1.83e-11 | 1 |
liver parenchyma | 1.83e-11 | 1 |
liver lobule | 1.83e-11 | 1 |
biliary system | 1.83e-11 | 1 |
biliary tree | 1.83e-11 | 1 |
biliary bud | 1.83e-11 | 1 |
hepatic duct | 1.83e-11 | 1 |
epithelium of mucosa | 3.46e-10 | 9 |
gastrointestinal system epithelium | 3.46e-10 | 9 |
intestinal epithelium | 3.46e-10 | 9 |
simple columnar epithelium | 1.90e-08 | 11 |
intestinal mucosa | 3.08e-07 | 13 |
wall of intestine | 3.08e-07 | 13 |
gastrointestinal system mucosa | 3.08e-07 | 13 |