FFCP PHASE1:Mm9::chr8:87238155..87238187,-: Difference between revisions
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{{FFCP|EntrezGene=18032|HGNC=|MCL_coexpression_id=1685|UniProt=|association_with_transcript=-188bp_to_ENSMUST00000132236_5end|description=CAGE_peak_13_at_Nfix_5end|id=chr8:87238155..87238187,-|ontology_enrichment_celltype=CL:0000221!3.17e-16!44;CL:0000133!3.17e-16!44;CL:0002319!1.37e-15!43;CL:0000117!1.17e-12!23;CL:0000337!1.17e-12!23;CL:0000540!1.44e-12!33;CL:0000047!1.44e-12!33;CL:0000031!1.44e-12!33;CL:0000404!1.44e-12!33;CL:0000055!3.18e-11!50;CL:0000393!8.08e-09!39;CL:0000211!8.08e-09!39|ontology_enrichment_celltype_v019_2=CL:0000221,3.77e-23,44;CL:0000133,3.77e-23,44;CL:0002319,1.25e-21,43;CL:0000117,2.51e-18,23;CL:0000337,2.51e-18,23;CL:0002453,7.81e-16,8;CL:0002321,1.40e-12,70;CL:0000333,1.98e-12,10;CL:0000095,1.98e-12,10;CL:0000243,1.98e-12,10;CL:0000123,1.98e-12,10;CL:0000125,1.98e-12,10;CL:0000030,1.98e-12,10;CL:0000339,1.98e-12,10;CL:0000540,8.61e-12,33;CL:0000047,8.61e-12,33;CL:0000031,8.61e-12,33;CL:0000404,8.61e-12,33;CL:0000128,4.75e-11,6;CL:0000126,4.75e-11,6;CL:0000127,4.75e-11,6;CL:0002609,4.75e-11,6;CL:0000393,1.72e-09,39;CL:0000211,1.72e-09,39;CL:0002613,1.46e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.30e-18!73;UBERON:0005743!2.30e-18!73;UBERON:0000073!3.05e-17!75;UBERON:0001016!3.05e-17!75;UBERON:0004121!1.01e-12!102;UBERON:0000924!1.01e-12!102;UBERON:0006601!1.01e-12!102;UBERON:0001049!1.59e-12!52;UBERON:0005068!1.59e-12!52;UBERON:0006241!1.59e-12!52;UBERON:0007135!1.59e-12!52;UBERON:0000033!6.25e-10!63;UBERON:0000955!1.55e-09!50;UBERON:0006238!1.55e-09!50;UBERON:0002346!2.02e-09!71;UBERON:0003075!2.02e-09!71;UBERON:0007284!2.02e-09!71;UBERON:0002616!4.63e-09!49;UBERON:0003076!2.85e-07!12;UBERON:0003057!2.85e-07!12;UBERON:0003080!3.50e-07!40;UBERON:0003056!3.98e-07!49;UBERON:0002780!5.47e-07!39;UBERON:0001890!5.47e-07!39;UBERON:0006240!5.47e-07!39;UBERON:0002020!8.43e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.47e-21,73;UBERON:0001016,2.42e-20,75;UBERON:0001049,2.31e-18,52;UBERON:0005068,2.31e-18,52;UBERON:0006241,2.31e-18,52;UBERON:0007135,2.31e-18,52;UBERON:0004121,5.44e-16,95;UBERON:0000924,5.44e-16,95;UBERON:0006601,5.44e-16,95;UBERON:0000073,1.05e-15,54;UBERON:0002020,1.63e-15,34;UBERON:0002346,6.20e-14,64;UBERON:0003075,6.20e-14,64;UBERON:0007284,6.20e-14,64;UBERON:0002616,1.70e-13,46;UBERON:0000955,4.06e-13,47;UBERON:0006238,4.06e-13,47;UBERON:0010371,8.00e-13,73;UBERON:0003528,5.86e-12,29;UBERON:0002791,5.86e-12,29;UBERON:0001893,5.86e-12,29;UBERON:0002780,3.99e-11,39;UBERON:0001890,3.99e-11,39;UBERON:0006240,3.99e-11,39;UBERON:0003080,9.24e-11,40;UBERON:0001954,2.01e-09,7;UBERON:0003022,2.01e-09,7;UBERON:0002421,2.01e-09,7;UBERON:0000349,2.01e-09,7;UBERON:0002600,2.01e-09,7;UBERON:0003076,2.46e-09,12;UBERON:0003057,2.46e-09,12;UBERON:0010314,4.50e-09,92;UBERON:0003056,3.66e-08,49;UBERON:0000369,1.55e-07,5;UBERON:0002435,1.55e-07,5;UBERON:0000204,1.55e-07,5;UBERON:0010082,1.55e-07,5;UBERON:0002240,6.23e-07,6;UBERON:0005174,6.23e-07,6;UBERON:0001137,6.23e-07,6;UBERON:0000956,6.25e-07,21;UBERON:0001869,6.25e-07,21;UBERON:0000203,6.25e-07,21;UBERON:0002420,6.74e-07,8;UBERON:0007245,6.74e-07,8;UBERON:0010009,6.74e-07,8;UBERON:0010011,6.74e-07,8;UBERON:0000454,6.74e-07,8|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.81113203712009,7.90870257844099,9.3326351555656,1.25987779462826,4.31257693094915,0,0,0,0,0,0,1.61853168687678,0.528990979272033,1.90149421051854,0.677689064138264,0,0,0,0,5.39280198933128,9.98967593836042,7.25827286159344,7.2903206699113,7.15104868594699,3.42781181284564,0.662605622854841,2.20483438586917,2.49198224647415,0.919218786610021,0,0.127687338085188,0.46081959976873,1.45074916503213,1.46380229763855,1.56274011167028,0.558365998002762,1.12552522006336,0.15279824777681,2.35702868378934,1.99320353118744,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.433798070759735,0,1.61766849947409,0.220841518460394,0,0,0.878342391034642,1.04723353406728,0.255457055208591,0,0,0,0.299581278809645,0,1.13088916901578,0,0,0,0.162241263067758,0.611036183101898,0.622034853050465,1.0108910337347,0.841767423545896,0,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.187403449119458,0.776110112217047,0.215567992932842,0,0,0.43839146485515,0.834141747676794,0.348252166522167,1.23469281844766,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.697601834251224,0.268273401399619,0,0.329119699826961,0.656669856316381,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,3.49875682089567,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.38992817423824,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,1.13825766823663,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0.482443521363367,0,0,0.325929952884052,0.848725428875941,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0.44292937929755,0.478364305972461,0,0,0,0,0,0,0,1.9266070798535,0.586058432961016,0,0.504941854408746,0.631016438832513,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.963963949265421,0.141940085208269,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0.922305443831782,0,0.363533729477506,0,0,1.05418608574999,0,2.04263763452273,0.36012218806262,0.776152102696527,0.643011105094777,0.709360934569094,0.178368817602071,0.987294123612726,1.2178597964584,0,0,0,0,0,0.120625849856312,0.238744688006273,0.164140899745061,0,1.66882771809459,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0.436725127492355,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.583353565032143,0.129159823477731,0.337912250981556,0.117357238645754,0.5208175393758,0,0,0,0,0,0.410843828659309,0,0,0,0,0,0.302899349844443,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,1.04806581313991,0.735374033800057,0.888986911206461,0.412070114477788,0,0,0,0.377252682772152,0.37456602987953,0.640251524048693,0.287177344778066,0,1.0429589335037,0.578727661391115,0,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.423073039458382,1.09756783723664,0.526139422875686,0.543216455383447,0,0.474540072496697,0.394017929502254,0,0.154936841185966,0.578719832943424,0.749431733813838,0,0.214871054048298,0.191288332068843,0.882365676478062,1.62307484934295|short_description=p13@Nfix}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18032 | |||
|HGNC= | |||
|MCL_coexpression_id=1685 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-188bp_to_ENSMUST00000132236_5end | |||
|cluster_id=chr8:87238155..87238187,- | |||
|description=CAGE_peak_13_at_Nfix_5end | |||
|id=chr8:87238155..87238187,- | |||
|ontology_enrichment_celltype=CL:0000221!3.17e-16!44;CL:0000133!3.17e-16!44;CL:0002319!1.37e-15!43;CL:0000117!1.17e-12!23;CL:0000337!1.17e-12!23;CL:0000540!1.44e-12!33;CL:0000047!1.44e-12!33;CL:0000031!1.44e-12!33;CL:0000404!1.44e-12!33;CL:0000055!3.18e-11!50;CL:0000393!8.08e-09!39;CL:0000211!8.08e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.77e-23,44;CL:0000133,3.77e-23,44;CL:0002319,1.25e-21,43;CL:0000117,2.51e-18,23;CL:0000337,2.51e-18,23;CL:0002453,7.81e-16,8;CL:0002321,1.40e-12,70;CL:0000333,1.98e-12,10;CL:0000095,1.98e-12,10;CL:0000243,1.98e-12,10;CL:0000123,1.98e-12,10;CL:0000125,1.98e-12,10;CL:0000030,1.98e-12,10;CL:0000339,1.98e-12,10;CL:0000540,8.61e-12,33;CL:0000047,8.61e-12,33;CL:0000031,8.61e-12,33;CL:0000404,8.61e-12,33;CL:0000128,4.75e-11,6;CL:0000126,4.75e-11,6;CL:0000127,4.75e-11,6;CL:0002609,4.75e-11,6;CL:0000393,1.72e-09,39;CL:0000211,1.72e-09,39;CL:0002613,1.46e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.30e-18!73;UBERON:0005743!2.30e-18!73;UBERON:0000073!3.05e-17!75;UBERON:0001016!3.05e-17!75;UBERON:0004121!1.01e-12!102;UBERON:0000924!1.01e-12!102;UBERON:0006601!1.01e-12!102;UBERON:0001049!1.59e-12!52;UBERON:0005068!1.59e-12!52;UBERON:0006241!1.59e-12!52;UBERON:0007135!1.59e-12!52;UBERON:0000033!6.25e-10!63;UBERON:0000955!1.55e-09!50;UBERON:0006238!1.55e-09!50;UBERON:0002346!2.02e-09!71;UBERON:0003075!2.02e-09!71;UBERON:0007284!2.02e-09!71;UBERON:0002616!4.63e-09!49;UBERON:0003076!2.85e-07!12;UBERON:0003057!2.85e-07!12;UBERON:0003080!3.50e-07!40;UBERON:0003056!3.98e-07!49;UBERON:0002780!5.47e-07!39;UBERON:0001890!5.47e-07!39;UBERON:0006240!5.47e-07!39;UBERON:0002020!8.43e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.47e-21,73;UBERON:0001016,2.42e-20,75;UBERON:0001049,2.31e-18,52;UBERON:0005068,2.31e-18,52;UBERON:0006241,2.31e-18,52;UBERON:0007135,2.31e-18,52;UBERON:0004121,5.44e-16,95;UBERON:0000924,5.44e-16,95;UBERON:0006601,5.44e-16,95;UBERON:0000073,1.05e-15,54;UBERON:0002020,1.63e-15,34;UBERON:0002346,6.20e-14,64;UBERON:0003075,6.20e-14,64;UBERON:0007284,6.20e-14,64;UBERON:0002616,1.70e-13,46;UBERON:0000955,4.06e-13,47;UBERON:0006238,4.06e-13,47;UBERON:0010371,8.00e-13,73;UBERON:0003528,5.86e-12,29;UBERON:0002791,5.86e-12,29;UBERON:0001893,5.86e-12,29;UBERON:0002780,3.99e-11,39;UBERON:0001890,3.99e-11,39;UBERON:0006240,3.99e-11,39;UBERON:0003080,9.24e-11,40;UBERON:0001954,2.01e-09,7;UBERON:0003022,2.01e-09,7;UBERON:0002421,2.01e-09,7;UBERON:0000349,2.01e-09,7;UBERON:0002600,2.01e-09,7;UBERON:0003076,2.46e-09,12;UBERON:0003057,2.46e-09,12;UBERON:0010314,4.50e-09,92;UBERON:0003056,3.66e-08,49;UBERON:0000369,1.55e-07,5;UBERON:0002435,1.55e-07,5;UBERON:0000204,1.55e-07,5;UBERON:0010082,1.55e-07,5;UBERON:0002240,6.23e-07,6;UBERON:0005174,6.23e-07,6;UBERON:0001137,6.23e-07,6;UBERON:0000956,6.25e-07,21;UBERON:0001869,6.25e-07,21;UBERON:0000203,6.25e-07,21;UBERON:0002420,6.74e-07,8;UBERON:0007245,6.74e-07,8;UBERON:0010009,6.74e-07,8;UBERON:0010011,6.74e-07,8;UBERON:0000454,6.74e-07,8 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.81113203712009,7.90870257844099,9.3326351555656,1.25987779462826,4.31257693094915,0,0,0,0,0,0,1.61853168687678,0.528990979272033,1.90149421051854,0.677689064138264,0,0,0,0,5.39280198933128,9.98967593836042,7.25827286159344,7.2903206699113,7.15104868594699,3.42781181284564,0.662605622854841,2.20483438586917,2.49198224647415,0.919218786610021,0,0.127687338085188,0.46081959976873,1.45074916503213,1.46380229763855,1.56274011167028,0.558365998002762,1.12552522006336,0.15279824777681,2.35702868378934,1.99320353118744,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.433798070759735,0,1.61766849947409,0.220841518460394,0,0,0.878342391034642,1.04723353406728,0.255457055208591,0,0,0,0.299581278809645,0,1.13088916901578,0,0,0,0.162241263067758,0.611036183101898,0.622034853050465,1.0108910337347,0.841767423545896,0,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.187403449119458,0.776110112217047,0.215567992932842,0,0,0.43839146485515,0.834141747676794,0.348252166522167,1.23469281844766,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.697601834251224,0.268273401399619,0,0.329119699826961,0.656669856316381,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,3.49875682089567,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.38992817423824,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,1.13825766823663,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0.482443521363367,0,0,0.325929952884052,0.848725428875941,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0.44292937929755,0.478364305972461,0,0,0,0,0,0,0,1.9266070798535,0.586058432961016,0,0.504941854408746,0.631016438832513,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.963963949265421,0.141940085208269,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0.922305443831782,0,0.363533729477506,0,0,1.05418608574999,0,2.04263763452273,0.36012218806262,0.776152102696527,0.643011105094777,0.709360934569094,0.178368817602071,0.987294123612726,1.2178597964584,0,0,0,0,0,0.120625849856312,0.238744688006273,0.164140899745061,0,1.66882771809459,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0.436725127492355,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.583353565032143,0.129159823477731,0.337912250981556,0.117357238645754,0.5208175393758,0,0,0,0,0,0.410843828659309,0,0,0,0,0,0.302899349844443,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,1.04806581313991,0.735374033800057,0.888986911206461,0.412070114477788,0,0,0,0.377252682772152,0.37456602987953,0.640251524048693,0.287177344778066,0,1.0429589335037,0.578727661391115,0,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.423073039458382,1.09756783723664,0.526139422875686,0.543216455383447,0,0.474540072496697,0.394017929502254,0,0.154936841185966,0.578719832943424,0.749431733813838,0,0.214871054048298,0.191288332068843,0.882365676478062,1.62307484934295 | |||
|short_description=p13@Nfix | |||
}} |
Latest revision as of 21:42, 25 September 2015
Short description: | p13@Nfix |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Nfix_5end |
Coexpression cluster: | MCL_coexpression_mm9:1685 |
Association with transcript: | -188bp_to_ENSMUST00000132236_5end |
EntrezGene: | Nfix |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.77e-23 | 44 |
neurectodermal cell | 3.77e-23 | 44 |
neural cell | 1.25e-21 | 43 |
CNS neuron (sensu Vertebrata) | 2.51e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.51e-18 | 23 |
oligodendrocyte precursor cell | 7.81e-16 | 8 |
embryonic cell | 1.40e-12 | 70 |
migratory neural crest cell | 1.98e-12 | 10 |
neuron associated cell | 1.98e-12 | 10 |
glial cell (sensu Vertebrata) | 1.98e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 1.98e-12 | 10 |
glial cell | 1.98e-12 | 10 |
glioblast | 1.98e-12 | 10 |
glioblast (sensu Vertebrata) | 1.98e-12 | 10 |
neuron | 8.61e-12 | 33 |
neuronal stem cell | 8.61e-12 | 33 |
neuroblast | 8.61e-12 | 33 |
electrically signaling cell | 8.61e-12 | 33 |
oligodendrocyte | 4.75e-11 | 6 |
macroglial cell | 4.75e-11 | 6 |
astrocyte | 4.75e-11 | 6 |
neuron of cerebral cortex | 4.75e-11 | 6 |
electrically responsive cell | 1.72e-09 | 39 |
electrically active cell | 1.72e-09 | 39 |
striatum neuron | 1.46e-07 | 3 |