FFCP PHASE1:Mm9::chr9:121614466..121614482,-: Difference between revisions
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{{FFCP|EntrezGene=215474|HGNC=|MCL_coexpression_id=24|UniProt=Q8BXT9|association_with_transcript=100bp_to_ENSMUST00000111560_5end|description=CAGE_peak_6_at_Sec22c_5end|id=chr9:121614466..121614482,-|ontology_enrichment_celltype=CL:0002563!2.05e-07!9;CL:0002251!2.05e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,3.23e-12,6;CL:0000677,3.23e-12,6;CL:0000584,3.23e-12,6;CL:0000075,2.00e-10,7;CL:0000066,4.96e-10,25;CL:0000682,1.93e-09,3;CL:0002563,4.95e-08,9;CL:0002251,4.95e-08,9;CL:0000473,6.35e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!8.76e-13!43;UBERON:0005409!3.90e-12!59;UBERON:0000344!9.47e-12!15;UBERON:0004923!1.70e-10!24;UBERON:0001242!2.06e-10!13;UBERON:0000060!2.06e-10!13;UBERON:0001262!2.06e-10!13;UBERON:0004786!2.06e-10!13;UBERON:0001007!4.08e-09!128;UBERON:0001555!4.08e-09!128;UBERON:0007026!4.08e-09!128;UBERON:0004119!1.07e-08!130;UBERON:0000925!1.07e-08!130;UBERON:0006595!1.07e-08!130;UBERON:0004921!2.88e-08!126;UBERON:0004185!2.88e-08!126;UBERON:0003350!2.05e-07!9;UBERON:0004808!2.05e-07!9;UBERON:0001277!2.05e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.20e-32,31;UBERON:0005409,4.70e-20,47;UBERON:0001242,4.41e-13,13;UBERON:0001262,4.41e-13,13;UBERON:0004786,4.41e-13,13;UBERON:0000344,3.64e-11,15;UBERON:0004921,1.59e-09,114;UBERON:0001007,2.83e-09,116;UBERON:0001555,2.83e-09,116;UBERON:0007026,2.83e-09,116;UBERON:0004119,4.96e-09,118;UBERON:0000925,4.96e-09,118;UBERON:0006595,4.96e-09,118;UBERON:0003350,4.95e-08,9;UBERON:0004808,4.95e-08,9;UBERON:0001277,4.95e-08,9;UBERON:0002108,9.64e-07,4|phase1_expression=0,2.09385244583617,3.63999391511629,4.23449895829562,6.01074875935617,1.00727563147134,0.233612640595526,0.129123323441576,0,0,0,0.0797721589953364,0,0.0874204024189974,0.333109761815663,0.404950534779652,0,0,0,0,0,0.198581902401771,0,0.95995453676044,0.68822784320151,5.7423196411502,2.15380998079537,1.50829862880122,0.380046838912748,1.26015064879965,1.10865255327652,0,0.61506478758457,0,0.288851619751275,0.332469290716985,0.204169356262369,0.418531630736908,0.7813353445238,0,1.17646297606203,4.78131839470912,0.971020706062307,0.377690453926732,0.202753862439029,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.0755715601067855,0.289864488701678,0,3.39985666853875,0,0,2.68816132258401,0.280888840263504,0.340860645156116,0,0.35333957451034,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0.125666591329675,0.988779870937496,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0.766371165625774,0,0,0.127070227073065,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,3.17340679996253,0,0,0.128867461322093,1.00841762311671,1.11189021922435,0.951128130562796,2.37264530772256,4.11747386810027,2.26201687920243,1.79060824837036,2.33956904542944,1.79763881730844,1.29682829924817,1.39398891278057,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.246794327843601,1.48226313543574,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0.810676133875177,0.549122826376163,2.87536413054709,0.744281895337007,0.936113019343682,0.505157755894224,0.538192240565737,0.964887042726734,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,3.01582567878545,0,0,0.275936746304732,0,0,0.163934945376675,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78925087618806,0,0,0.206386867963223,0,0.188368457004691,0.820165366326151,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0.26175594198403,0.388844919875379,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0,0.114870937911227,0,0,0,0.412085900803307,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0.385813221962283,0,0.467863216890817,0.214871054048298,0.191288332068843,0,0|short_description=p6@Sec22c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=215474 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BXT9 | |||
|association_with_transcript=100bp_to_ENSMUST00000111560_5end | |||
|cluster_id=chr9:121614466..121614482,- | |||
|description=CAGE_peak_6_at_Sec22c_5end | |||
|id=chr9:121614466..121614482,- | |||
|ontology_enrichment_celltype=CL:0002563!2.05e-07!9;CL:0002251!2.05e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.23e-12,6;CL:0000677,3.23e-12,6;CL:0000584,3.23e-12,6;CL:0000075,2.00e-10,7;CL:0000066,4.96e-10,25;CL:0000682,1.93e-09,3;CL:0002563,4.95e-08,9;CL:0002251,4.95e-08,9;CL:0000473,6.35e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.76e-13!43;UBERON:0005409!3.90e-12!59;UBERON:0000344!9.47e-12!15;UBERON:0004923!1.70e-10!24;UBERON:0001242!2.06e-10!13;UBERON:0000060!2.06e-10!13;UBERON:0001262!2.06e-10!13;UBERON:0004786!2.06e-10!13;UBERON:0001007!4.08e-09!128;UBERON:0001555!4.08e-09!128;UBERON:0007026!4.08e-09!128;UBERON:0004119!1.07e-08!130;UBERON:0000925!1.07e-08!130;UBERON:0006595!1.07e-08!130;UBERON:0004921!2.88e-08!126;UBERON:0004185!2.88e-08!126;UBERON:0003350!2.05e-07!9;UBERON:0004808!2.05e-07!9;UBERON:0001277!2.05e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.20e-32,31;UBERON:0005409,4.70e-20,47;UBERON:0001242,4.41e-13,13;UBERON:0001262,4.41e-13,13;UBERON:0004786,4.41e-13,13;UBERON:0000344,3.64e-11,15;UBERON:0004921,1.59e-09,114;UBERON:0001007,2.83e-09,116;UBERON:0001555,2.83e-09,116;UBERON:0007026,2.83e-09,116;UBERON:0004119,4.96e-09,118;UBERON:0000925,4.96e-09,118;UBERON:0006595,4.96e-09,118;UBERON:0003350,4.95e-08,9;UBERON:0004808,4.95e-08,9;UBERON:0001277,4.95e-08,9;UBERON:0002108,9.64e-07,4 | |||
|phase1_expression=0,2.09385244583617,3.63999391511629,4.23449895829562,6.01074875935617,1.00727563147134,0.233612640595526,0.129123323441576,0,0,0,0.0797721589953364,0,0.0874204024189974,0.333109761815663,0.404950534779652,0,0,0,0,0,0.198581902401771,0,0.95995453676044,0.68822784320151,5.7423196411502,2.15380998079537,1.50829862880122,0.380046838912748,1.26015064879965,1.10865255327652,0,0.61506478758457,0,0.288851619751275,0.332469290716985,0.204169356262369,0.418531630736908,0.7813353445238,0,1.17646297606203,4.78131839470912,0.971020706062307,0.377690453926732,0.202753862439029,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.0755715601067855,0.289864488701678,0,3.39985666853875,0,0,2.68816132258401,0.280888840263504,0.340860645156116,0,0.35333957451034,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0.125666591329675,0.988779870937496,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0.766371165625774,0,0,0.127070227073065,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,3.17340679996253,0,0,0.128867461322093,1.00841762311671,1.11189021922435,0.951128130562796,2.37264530772256,4.11747386810027,2.26201687920243,1.79060824837036,2.33956904542944,1.79763881730844,1.29682829924817,1.39398891278057,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.246794327843601,1.48226313543574,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0.810676133875177,0.549122826376163,2.87536413054709,0.744281895337007,0.936113019343682,0.505157755894224,0.538192240565737,0.964887042726734,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,3.01582567878545,0,0,0.275936746304732,0,0,0.163934945376675,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78925087618806,0,0,0.206386867963223,0,0.188368457004691,0.820165366326151,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0.26175594198403,0.388844919875379,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0,0.114870937911227,0,0,0,0.412085900803307,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0.385813221962283,0,0.467863216890817,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p6@Sec22c | |||
}} |
Latest revision as of 08:29, 26 September 2015
Short description: | p6@Sec22c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Sec22c_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 100bp_to_ENSMUST00000111560_5end |
EntrezGene: | Sec22c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.23e-12 | 6 |
gut absorptive cell | 3.23e-12 | 6 |
enterocyte | 3.23e-12 | 6 |
columnar/cuboidal epithelial cell | 2.00e-10 | 7 |
epithelial cell | 4.96e-10 | 25 |
M cell of gut | 1.93e-09 | 3 |
intestinal epithelial cell | 4.95e-08 | 9 |
epithelial cell of alimentary canal | 4.95e-08 | 9 |
defensive cell | 6.35e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.20e-32 | 31 |
gastrointestinal system | 4.70e-20 | 47 |
intestinal mucosa | 4.41e-13 | 13 |
wall of intestine | 4.41e-13 | 13 |
gastrointestinal system mucosa | 4.41e-13 | 13 |
mucosa | 3.64e-11 | 15 |
subdivision of digestive tract | 1.59e-09 | 114 |
digestive system | 2.83e-09 | 116 |
digestive tract | 2.83e-09 | 116 |
primitive gut | 2.83e-09 | 116 |
endoderm-derived structure | 4.96e-09 | 118 |
endoderm | 4.96e-09 | 118 |
presumptive endoderm | 4.96e-09 | 118 |
epithelium of mucosa | 4.95e-08 | 9 |
gastrointestinal system epithelium | 4.95e-08 | 9 |
intestinal epithelium | 4.95e-08 | 9 |
small intestine | 9.64e-07 | 4 |