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FFCP PHASE1:Mm9::chr11:54336453..54336478,+: Difference between revisions

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(Created page with "{{FFCP |id=chr11:54336453..54336478,+ |short_description=p2@Rapgef6 |description=CAGE_peak_2_at_Rapgef6_5end |association_with_transcript=5bp_to_ENSMUST00000041060,ENSMUST...")
 
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{{FFCP
{{FFCP
|id=chr11:54336453..54336478,+
|DHSsupport=NA
|short_description=p2@Rapgef6
|DPIdataset=NA
|description=CAGE_peak_2_at_Rapgef6_5end
|association_with_transcript=5bp_to_ENSMUST00000041060,ENSMUST00000050145_5end
|EntrezGene=192786
|EntrezGene=192786
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=B2RUJ6,Q5NCJ5
|UniProt=B2RUJ6,Q5NCJ5
|association_with_transcript=5bp_to_ENSMUST00000041060,ENSMUST00000050145_5end
|cluster_id=chr11:54336453..54336478,+
|description=CAGE_peak_2_at_Rapgef6_5end
|id=chr11:54336453..54336478,+
|ontology_enrichment_celltype=CL:0000988!1.67e-09!32;CL:0002032!1.67e-09!32;CL:0000037!1.67e-09!32;CL:0000566!1.67e-09!32;CL:0000837!1.67e-09!32;CL:0000838!9.12e-09!12;CL:0000542!2.83e-08!13;CL:0000051!2.83e-08!13;CL:0000084!4.38e-08!11;CL:0000827!4.38e-08!11;CL:0000791!3.01e-07!9;CL:0000789!3.01e-07!9;CL:0002420!3.01e-07!9;CL:0002419!3.01e-07!9;CL:0000790!3.01e-07!9;CL:0002031!8.88e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000988,2.73e-11,32;CL:0002032,2.73e-11,32;CL:0000037,2.73e-11,32;CL:0000837,2.73e-11,32;CL:0000838,3.20e-09,12;CL:0000542,1.06e-08,13;CL:0000051,1.06e-08,13;CL:0000084,1.69e-08,11;CL:0000827,1.69e-08,11;CL:0002031,2.65e-08,25;CL:0000791,1.31e-07,9;CL:0000789,1.31e-07,9;CL:0002420,1.31e-07,9;CL:0002419,1.31e-07,9;CL:0000790,1.31e-07,9;CL:0002320,3.84e-07,46;CL:0000134,3.84e-07,46;CL:0000624,5.86e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005911!1.67e-12!69;UBERON:0000490!5.31e-11!66;UBERON:0000926!9.61e-11!193;UBERON:0004120!9.61e-11!193;UBERON:0006603!9.61e-11!193;UBERON:0002405!1.45e-10!70;UBERON:0005057!2.03e-10!51;UBERON:0003929!3.13e-10!55;UBERON:0001007!7.91e-09!128;UBERON:0001555!7.91e-09!128;UBERON:0007026!7.91e-09!128;UBERON:0004119!8.89e-09!130;UBERON:0000925!8.89e-09!130;UBERON:0006595!8.89e-09!130;UBERON:0003081!1.94e-08!88;UBERON:0004921!2.40e-08!126;UBERON:0004185!2.40e-08!126;UBERON:0001041!5.44e-08!92;UBERON:0004177!9.63e-08!29;UBERON:0002193!1.65e-07!48;UBERON:0003104!2.44e-07!131;UBERON:0009142!2.44e-07!131;UBERON:0000065!3.47e-07!41;UBERON:0000077!3.67e-07!97;UBERON:0001048!8.87e-07!147;UBERON:0001004!9.22e-07!42
|ontology_enrichment_uberon_v019_2=UBERON:0005911,1.73e-12,69;UBERON:0000490,4.07e-11,66;UBERON:0003929,3.15e-10,55;UBERON:0001041,7.87e-10,80;UBERON:0003081,1.33e-09,87;UBERON:0001007,1.90e-09,116;UBERON:0001555,1.90e-09,116;UBERON:0007026,1.90e-09,116;UBERON:0002193,2.82e-09,48;UBERON:0002405,2.82e-09,48;UBERON:0004119,3.10e-09,118;UBERON:0000925,3.10e-09,118;UBERON:0006595,3.10e-09,118;UBERON:0004921,6.26e-09,114;UBERON:0000926,9.83e-09,120;UBERON:0004120,9.83e-09,120;UBERON:0006603,9.83e-09,120;UBERON:0002390,3.48e-08,45;UBERON:0003061,3.48e-08,45;UBERON:0004177,3.82e-08,29;UBERON:0005057,3.82e-08,29;UBERON:0001048,4.62e-08,134;UBERON:0000065,3.18e-07,41;UBERON:0002384,3.84e-07,46
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|phase1_expression=0.480446541314382,2.44282785347553,5.45999087267443,2.72217790176147,4.50806156951712,2.35030980676646,2.80335168714631,16.9151553708465,129.666413101685,121.713553687437,30.3055803759144,20.4216727028061,22.427295620988,14.8614684112296,4.99664642723494,7.69406016081339,0,29.3379813783161,28.1084588891765,33.1023928402464,1.61582251287033,5.26242041364692,4.4403964153619,3.51983330145495,2.2940928106717,1.14846392823004,2.58457197695445,2.80112602491656,1.71021077510736,2.26827116783938,1.10865255327652,8.89042942843484,3.07532393792285,0,2.88851619751275,0.997407872150954,3.67504841272264,23.0192396905299,14.8453715459522,15.7057123192139,20.5881020810855,18.442228093878,17.9638830621527,2.26614272356039,3.95370031756107,2.0190142737785,0.782391344348039,0.218025156380447,0.219686182734472,0.388859798148567,0,0,33.0531733933741,23.9369506863744,19.4934403502629,2.31533492432352,0.286533439938757,1.54701627683233,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,0,0,0.244981598429908,0.0958454710182364,0.919218786610021,0,0.383062014255563,0.153606533256243,0,0,0,0,0.56276261003168,0.15279824777681,0.589257170947335,0.569486723196412,0.372798891650601,1.13589289999776,1.51143120213571,11.0148505706638,3.44169550792555,3.39985666853875,0.539703191637817,1.94932925234301,2.68816132258401,1.68533304158102,0.852151612890289,0.779358013808606,0.70667914902068,0.563373679106722,1.28326477414318,5.09610479413291,0,0.865964164044856,1.01343946190039,1.51657333504435,2.74041311325744,26.1527262483643,1.03909497345377,0.346970653532272,0.913396434936424,0.922461989024234,0.60289056221049,1.76383060703557,0.125666591329675,0.494389935468748,2.31358971071859,6.19227386364912,1.29413479957927,2.42925670306433,3.39412677194655,0,0.585561594023094,0.41889341362691,1.27728527604296,12.1013275750979,11.3981518888747,8.25956475974921,0.149790639404823,0.457500602818626,0.628271760564322,0.347648640384553,0.767146371990992,0.20778804455956,0.811206315338788,1.73126918545538,6.22034853050465,5.05445516867349,0.210441855886474,0.260240885925407,0.229902104433473,0.360124259610698,0.60281927134286,1.42876648217788,0.384341160854549,0.281105173679186,0.258703370739016,0.215567992932842,0.567318240503458,0.703804496655795,1.31517439456545,1.11218899690239,2.089512999133,1.4404749548556,1.39323986772945,6.31991868581911,10.0365683774739,5.96743348730745,1.65700618028402,1.17263029990548,1.08037236876609,2.13070262026689,2.16440654922144,2.31400669331067,2.09280550275367,2.41446061259657,2.91913355917924,1.81015834904829,1.64167464079095,2.1888578577381,1.75439984910399,2.19550115291051,1.07365135008297,0.210289948564127,0.411618449517138,2.31293148088659,1.05780226665418,1.2797295032114,0.928946687441754,1.15980715189884,0.80673409849337,0.889512175379481,0.760902504450237,1.89811624617805,1.31759163779209,1.25667604400135,0.795825888164603,0.779856348476481,2.69645822596266,1.08069024937347,3.38540164532424,0.758671603812327,1.14248512609729,1.1270773567308,1.01825663922657,1.16371492300575,1.8936671370386,1.13825766823663,1.62371162777562,0.627994911365499,0.987177311374404,2.37162101669719,1.00107063429656,1.17935397067922,1.12431056192427,2.43432145666204,0.964708639009667,1.78238096246994,2.30156909960649,2.10775794807546,2.47105271869273,11.5014565221884,3.72140947668503,4.68056509671841,1.76805214562978,1.61457672169721,4.82443521363367,3.51031061316549,0.757965647081939,1.79261474086228,2.03694102930226,1.17345124144251,1.84256883185997,2.61848004974615,3.70753930929818,2.36452716159286,2.21464689648775,1.75400245523236,2.78567635016755,3.9717545829156,3.03763023021174,3.01582567878545,0,0.491764273019036,1.37968373152366,0.321101179975584,0.468846746368813,1.47541450839008,1.00988370881749,1.26203287766503,0.390438744296638,1.29254038639679,0.477937595905104,0.445597348164788,1.13230612315533,0.809621403349789,0.584511715822624,0.790575555893047,0,2.55492153374884,0.178065603667255,2.76907830901079,2.47455184458803,0,0.728341908464944,0.906970670894253,0.943025398779491,0.590603785761546,1.84461088766356,0.775284879504663,1.09060118843252,1.06949213515416,0.948110273807448,3.16255825724996,1.03135543248187,0.680879211507576,0.18006109403131,0.258717367565509,0.857348140126369,0.709360934569094,0.356737635204141,0.329098041204242,0.304464949114599,1.87737366450968,0.847328283455281,0.441056796109924,1.31909002353184,1.13025098687134,1.08563264870681,1.19372344003136,1.80554989719567,1.7488850197791,0.741701208042039,4.78438466233988,1.44470807574256,3.1483069652851,2.44878994106098,6.42462870288818,5.71945433016307,8.49892149969276,12.8755336137765,9.67399816630967,0,0.632671987162271,1.01659733563424,0.756037385752609,1.88179466413022,1.74690050996942,1.48350781023303,1.48776220305605,0.785267825952089,2.46268449254406,0.621339313086926,1.69107881605257,2.0932316446157,0.66183396182839,1.36115831840833,1.80823752868824,1.68956125490778,2.34714477291508,1.95306577265925,4.61381115473128,1.69108884578204,1.44015003128933,4.4241556887945,0.405450430580328,0.924398614483445,1.03936658382236,2.32734704367726,2.78153896693771,3.36547258655913,3.2491695978407,3.43285929823702,2.51482461961499,3.02478555410522,4.38560463328886,4.04089734889384,4.32444538071805,1.36038230169127,0.665957860122194,1.34570784914214,1.00730769818447,0.579568782096571,0.563047426353546,3.29672923681077,1.07184189539533,0,0,0.920650473014354,0.572895513439397,0.343706364687375,0.685082519770642,1.5107877947794,2.02506750069542,0.900642406448441,0.906284817968409,0,0.415149390336707,0.798049746802062,0.682934423016537,1.45864030240976,0.628839487883947,0.551530525350042,1.55572709461131,2.26638562962784,1.28367683836726,1.51618327058278,1.01391719956096,1.13175804831646,1.31098110457835,1.08842759088278,0.918967503289812,1.42888107384922,1.15884325944855,1.15745532278223,1.23625770240992,1.03039244094078,1.71434626192708,1.4198064492747,1.1921809497366,1.30811774969096,0.941093804153306,0.676916863133412,0.914639864363863,0.526139422875686,1.08643291076689,1.12228454331548,0.949080144993393,0.591026894253381,1.22769312950907,1.54936841185966,0.771626443924566,0.249810577937946,0.467863216890817,1.93383948643468,1.3390183244819,1.32354851471709,1.62307484934295
|short_description=p2@Rapgef6
}}
}}

Latest revision as of 17:02, 1 October 2015

Short description:p2@Rapgef6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rapgef6_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 5bp_to_ENSMUST00000041060, ENSMUST00000050145_5end
EntrezGene:Rapgef6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rapgef6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E916.92
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7129.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2121.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E630.31
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F120.42
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.43
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.86
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.69
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A229.34
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A428.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A633.10
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I22.80
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G823.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H315.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G920.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H218.44
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H417.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A233.05
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I923.94
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A119.49
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.01
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.74
accessory axillary lymph node, adult.CNhs10475.1063-29H926.15
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.10
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D111.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.26
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.22
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.04
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.97
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E32.92
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G12.19
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.89
kidney, neonate N10.CNhs11206.758-6D51.14
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G24.78
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H16.42
spleen, neonate N25.CNhs11099.1354-25G35.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C912.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.67
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B72.35
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D94.61
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F83.37
thymus, neonate N03.CNhs11137.2104-43C73.25
thymus, neonate N06.CNhs11197.681-26C43.43
thymus, neonate N07.CNhs11211.713-19D32.51
thymus, neonate N10.CNhs11194.748-24E43.02
thymus, neonate N20.CNhs11186.820-7A24.39
thymus, neonate N25.CNhs11125.1362-25G74.04
thymus, neonate N30.CNhs11132.1393-42G24.32
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endo-epithelium1.73e-1269
unilaminar epithelium4.07e-1166
gut epithelium3.15e-1055
foregut7.87e-1080
lateral plate mesoderm1.33e-0987
digestive system1.90e-09116
digestive tract1.90e-09116
primitive gut1.90e-09116
hemolymphoid system2.82e-0948
immune system2.82e-0948
endoderm-derived structure3.10e-09118
endoderm3.10e-09118
presumptive endoderm3.10e-09118
subdivision of digestive tract6.26e-09114
mesoderm9.83e-09120
mesoderm-derived structure9.83e-09120
presumptive mesoderm9.83e-09120
hematopoietic system3.48e-0845
blood island3.48e-0845
hemopoietic organ3.82e-0829
immune organ3.82e-0829
primordium4.62e-08134
respiratory tract3.18e-0741
connective tissue3.84e-0746
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