FFCP PHASE1:Mm9::chr11:85646469..85646488,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:85646469..85646488,+
|short_description=p5@Tbx2
|description=CAGE_peak_5_at_Tbx2_5end
|association_with_transcript=352bp_to_NM_009324,uc007ksb.1_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=21385 | |EntrezGene=21385 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1092 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UET7,Q60707 | |UniProt=Q3UET7,Q60707 | ||
|association_with_transcript=352bp_to_NM_009324,uc007ksb.1_5end | |||
|cluster_id=chr11:85646469..85646488,+ | |||
|description=CAGE_peak_5_at_Tbx2_5end | |||
|id=chr11:85646469..85646488,+ | |||
|ontology_enrichment_celltype=CL:0000107!2.27e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,5.92e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!3.08e-12!27;UBERON:0002048!2.75e-10!14;UBERON:0000117!2.75e-10!14;UBERON:0000171!2.75e-10!14;UBERON:0000170!2.75e-10!14;UBERON:0005597!2.75e-10!14;UBERON:0000118!2.75e-10!14;UBERON:0001008!2.65e-09!17;UBERON:0006554!3.22e-09!16;UBERON:0000464!7.10e-09!57;UBERON:0002113!1.32e-08!14;UBERON:0003918!1.32e-08!14;UBERON:0005095!1.32e-08!14;UBERON:0007687!1.32e-08!14;UBERON:0005153!2.37e-08!17;UBERON:0000010!8.80e-08!11;UBERON:0005178!1.76e-07!17;UBERON:0005181!1.76e-07!17;UBERON:0002224!1.76e-07!17;UBERON:0000915!1.76e-07!17;UBERON:0008947!1.76e-07!17;UBERON:0003258!1.76e-07!17;UBERON:0000489!1.76e-07!21;UBERON:0002410!2.27e-07!9;UBERON:0005177!3.03e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005157,8.08e-13,20;UBERON:0002048,1.18e-12,14;UBERON:0000117,1.18e-12,14;UBERON:0000171,1.18e-12,14;UBERON:0000170,1.18e-12,14;UBERON:0005597,1.18e-12,14;UBERON:0000118,1.18e-12,14;UBERON:0002113,1.61e-10,14;UBERON:0003918,1.61e-10,14;UBERON:0011143,1.61e-10,14;UBERON:0005095,1.61e-10,14;UBERON:0007687,1.61e-10,14;UBERON:0005153,2.65e-10,17;UBERON:0001008,1.72e-09,19;UBERON:0000010,1.78e-09,11;UBERON:0006554,2.53e-09,18;UBERON:0005178,2.64e-09,17;UBERON:0005181,2.64e-09,17;UBERON:0002224,2.64e-09,17;UBERON:0000915,2.64e-09,17;UBERON:0008947,2.64e-09,17;UBERON:0003258,2.64e-09,17;UBERON:0002410,5.92e-09,9;UBERON:0005177,1.25e-07,79;UBERON:0000489,2.22e-07,21;UBERON:0003064,2.56e-07,14;UBERON:0009569,2.69e-07,66 | |||
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91199134694921,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0,0.439372365468944,0,0,0,0,0,0,1.02903774414379,1.14613375975503,0,0.404632921719196,0,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,2.20868540951614,0.122490799214954,0.191690942036473,0,0,0,0.307213066512487,0.395658863190582,0,0,0,0,0.30559649555362,0.883885756421003,0.284743361598206,0.372798891650601,3.86203585999239,1.36028808192214,1.15945795480671,0.860423876981386,0,0,0,0.448026887097336,0.983110940922263,0,0,0,4.50698943285378,0,0,0,0,0,0.505524445014783,2.39786147410026,0,1.48442139064825,3.46970653532272,1.82679286987285,2.53677046981664,1.80867168663147,2.23418543557839,1.88499886994513,0.247194967734374,0.433798070759735,0,2.10296904931632,1.10420759230197,2.90925151881133,0,0.292780797011547,0.41889341362691,0,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0,0,0,0.162241263067758,3.7680564624617,2.73695335342205,7.07623723614289,0.420883711772948,0.520481771850815,0.689706313300419,1.44049703844279,1.9591626318643,2.04109497453984,1.40925092313335,2.06143794031403,1.03481348295606,0.862271971731369,1.32374256117473,1.05570674498369,2.41115305670332,0.556094498451196,0.696504333044333,0.61734640922383,4.37875387000685,0,0,0,0.621377317606506,0.938104239924385,0.540186184383045,1.18372367792605,0.590292695242212,0.617068451549513,0.697601834251224,0.804820204198858,0.350296027101508,0.493679549740441,0.820837320395476,1.21603214318784,1.16959989940266,1.53685080703735,1.47627060636409,0,0.514523061896422,0,0.264450566663544,2.55945900642281,1.62565670302307,1.41754207454303,0.80673409849337,1.11189021922435,1.14135375667535,0,1.15289268306808,0.251335208800269,0.397912944082302,0.58489226135736,0,0.216138049874694,0.199141273254367,3.41402221715547,3.31320686568214,4.50830942692322,4.07302655690629,4.65485969202302,7.08371780892217,7.33543830641385,3.54264355151045,6.59394656933774,4.81248939295022,0,0.333690211432188,0.589676985339609,0,0.405720242777006,0.241177159752417,0.50925170356284,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0.505157755894224,0,0,16.2582807346612,3.22135400009824,5.86673915191293,6.78980343100753,7.51008794523207,7.53778158488171,8.80761471278251,25.7576415172294,13.7142575372386,15.2810635857655,18.4967531642685,15.5670148979951,18.4772930596508,15.7667473853848,0,0,0,0.275936746304732,0.481651769963376,0.117211686592203,0.163934945376675,1.26235463602186,18.9304931649754,16.0079885161622,9.47862950024315,15.7719406648684,10.4715376818725,12.7384438854975,13.3587531552715,13.151513606009,9.48690667071656,0.321321316421807,1.70328102249922,3.38324646967785,3.25773918707152,1.81467135269789,1.32745138339963,1.69946445308487,0.906970670894253,0.754420319023592,0.295301892880773,1.84461088766356,3.10113951801865,2.18120237686503,1.42598951353889,0.948110273807448,0,0,0.340439605753788,1.8006109403131,1.68166288917581,1.28602221018955,0.709360934569094,0.891844088010353,0.493647061806363,2.13125464380219,0,0.63549621259146,1.32317038832977,0.16488625294148,0.968786560175433,0.422190474497091,0,0.164140899745061,0,0.370850604021019,0.170870880797853,1.23832120777933,0.370389054739423,0,0,0,0,0,0,0,0.949007980743406,0.406638934253697,1.40406943068342,0.836353184057875,1.09181281873089,0.809186078308924,1.48776220305605,1.04702376793612,0.129614973291793,0,0,7.92437694033088,5.46013018508422,4.4723773319131,3.61647505737647,3.21016638432478,3.52071715937262,2.0832701575032,0.734015410979976,0.241584120826006,0,0,2.63542779877213,0.924398614483445,0,0,0,0,0.147689527174577,0.100966449948148,0.228620419965,0,0,0,0,1.58711268530648,0,0,0,11.0118068598349,0.93841237725591,0.73260649706906,1.50057865355346,12.0377304968487,0,0,0,0.171853182343688,0,0,0,0,0,0,0.726511433089237,1.19707462020309,0.341467211508268,0.486213434136588,1.67690530102386,2.38996560985018,2.00022055021454,2.26638562962784,0.962757628775446,0.758091635291392,1.01391719956096,1.88626341386076,2.24739617927718,2.43295579138503,2.92920891673628,1.42888107384922,2.20180219295225,2.12200142510076,2.06042950401653,1.61918812147837,1.71434626192708,1.95223386775271,1.43061713968393,2.61623549938191,1.78807822789128,2.36920902096694,1.28049581010941,1.05227884575137,2.17286582153379,2.24456908663095,1.30498519936592,2.9551344712669,2.04615521584845,1.54936841185966,2.50778594275484,1.24905288968973,0.935726433781634,0.859484216193193,1.53030665655075,1.76473135295612,0.463735671240843 | |phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91199134694921,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0,0.439372365468944,0,0,0,0,0,0,1.02903774414379,1.14613375975503,0,0.404632921719196,0,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,2.20868540951614,0.122490799214954,0.191690942036473,0,0,0,0.307213066512487,0.395658863190582,0,0,0,0,0.30559649555362,0.883885756421003,0.284743361598206,0.372798891650601,3.86203585999239,1.36028808192214,1.15945795480671,0.860423876981386,0,0,0,0.448026887097336,0.983110940922263,0,0,0,4.50698943285378,0,0,0,0,0,0.505524445014783,2.39786147410026,0,1.48442139064825,3.46970653532272,1.82679286987285,2.53677046981664,1.80867168663147,2.23418543557839,1.88499886994513,0.247194967734374,0.433798070759735,0,2.10296904931632,1.10420759230197,2.90925151881133,0,0.292780797011547,0.41889341362691,0,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0,0,0,0.162241263067758,3.7680564624617,2.73695335342205,7.07623723614289,0.420883711772948,0.520481771850815,0.689706313300419,1.44049703844279,1.9591626318643,2.04109497453984,1.40925092313335,2.06143794031403,1.03481348295606,0.862271971731369,1.32374256117473,1.05570674498369,2.41115305670332,0.556094498451196,0.696504333044333,0.61734640922383,4.37875387000685,0,0,0,0.621377317606506,0.938104239924385,0.540186184383045,1.18372367792605,0.590292695242212,0.617068451549513,0.697601834251224,0.804820204198858,0.350296027101508,0.493679549740441,0.820837320395476,1.21603214318784,1.16959989940266,1.53685080703735,1.47627060636409,0,0.514523061896422,0,0.264450566663544,2.55945900642281,1.62565670302307,1.41754207454303,0.80673409849337,1.11189021922435,1.14135375667535,0,1.15289268306808,0.251335208800269,0.397912944082302,0.58489226135736,0,0.216138049874694,0.199141273254367,3.41402221715547,3.31320686568214,4.50830942692322,4.07302655690629,4.65485969202302,7.08371780892217,7.33543830641385,3.54264355151045,6.59394656933774,4.81248939295022,0,0.333690211432188,0.589676985339609,0,0.405720242777006,0.241177159752417,0.50925170356284,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0.505157755894224,0,0,16.2582807346612,3.22135400009824,5.86673915191293,6.78980343100753,7.51008794523207,7.53778158488171,8.80761471278251,25.7576415172294,13.7142575372386,15.2810635857655,18.4967531642685,15.5670148979951,18.4772930596508,15.7667473853848,0,0,0,0.275936746304732,0.481651769963376,0.117211686592203,0.163934945376675,1.26235463602186,18.9304931649754,16.0079885161622,9.47862950024315,15.7719406648684,10.4715376818725,12.7384438854975,13.3587531552715,13.151513606009,9.48690667071656,0.321321316421807,1.70328102249922,3.38324646967785,3.25773918707152,1.81467135269789,1.32745138339963,1.69946445308487,0.906970670894253,0.754420319023592,0.295301892880773,1.84461088766356,3.10113951801865,2.18120237686503,1.42598951353889,0.948110273807448,0,0,0.340439605753788,1.8006109403131,1.68166288917581,1.28602221018955,0.709360934569094,0.891844088010353,0.493647061806363,2.13125464380219,0,0.63549621259146,1.32317038832977,0.16488625294148,0.968786560175433,0.422190474497091,0,0.164140899745061,0,0.370850604021019,0.170870880797853,1.23832120777933,0.370389054739423,0,0,0,0,0,0,0,0.949007980743406,0.406638934253697,1.40406943068342,0.836353184057875,1.09181281873089,0.809186078308924,1.48776220305605,1.04702376793612,0.129614973291793,0,0,7.92437694033088,5.46013018508422,4.4723773319131,3.61647505737647,3.21016638432478,3.52071715937262,2.0832701575032,0.734015410979976,0.241584120826006,0,0,2.63542779877213,0.924398614483445,0,0,0,0,0.147689527174577,0.100966449948148,0.228620419965,0,0,0,0,1.58711268530648,0,0,0,11.0118068598349,0.93841237725591,0.73260649706906,1.50057865355346,12.0377304968487,0,0,0,0.171853182343688,0,0,0,0,0,0,0.726511433089237,1.19707462020309,0.341467211508268,0.486213434136588,1.67690530102386,2.38996560985018,2.00022055021454,2.26638562962784,0.962757628775446,0.758091635291392,1.01391719956096,1.88626341386076,2.24739617927718,2.43295579138503,2.92920891673628,1.42888107384922,2.20180219295225,2.12200142510076,2.06042950401653,1.61918812147837,1.71434626192708,1.95223386775271,1.43061713968393,2.61623549938191,1.78807822789128,2.36920902096694,1.28049581010941,1.05227884575137,2.17286582153379,2.24456908663095,1.30498519936592,2.9551344712669,2.04615521584845,1.54936841185966,2.50778594275484,1.24905288968973,0.935726433781634,0.859484216193193,1.53030665655075,1.76473135295612,0.463735671240843 | ||
|short_description=p5@Tbx2 | |||
}} | }} |
Latest revision as of 21:22, 25 September 2015
Short description: | p5@Tbx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tbx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1092 |
Association with transcript: | 352bp_to_NM_009324, uc007ksb.1_5end |
EntrezGene: | Tbx2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 5.92e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
epithelial fold | 8.08e-13 | 20 |
lung | 1.18e-12 | 14 |
respiratory tube | 1.18e-12 | 14 |
respiration organ | 1.18e-12 | 14 |
pair of lungs | 1.18e-12 | 14 |
lung primordium | 1.18e-12 | 14 |
lung bud | 1.18e-12 | 14 |
kidney | 1.61e-10 | 14 |
kidney mesenchyme | 1.61e-10 | 14 |
upper urinary tract | 1.61e-10 | 14 |
kidney rudiment | 1.61e-10 | 14 |
kidney field | 1.61e-10 | 14 |
epithelial bud | 2.65e-10 | 17 |
renal system | 1.72e-09 | 19 |
peripheral nervous system | 1.78e-09 | 11 |
urinary system structure | 2.53e-09 | 18 |
thoracic cavity element | 2.64e-09 | 17 |
thoracic segment organ | 2.64e-09 | 17 |
thoracic cavity | 2.64e-09 | 17 |
thoracic segment of trunk | 2.64e-09 | 17 |
respiratory primordium | 2.64e-09 | 17 |
endoderm of foregut | 2.64e-09 | 17 |
autonomic nervous system | 5.92e-09 | 9 |
trunk region element | 1.25e-07 | 79 |
cavitated compound organ | 2.22e-07 | 21 |
intermediate mesoderm | 2.56e-07 | 14 |
subdivision of trunk | 2.69e-07 | 66 |