FFCP PHASE1:Mm9::chr12:33063776..33063794,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:33063776..33063794,+
|short_description=p4@2010109K11Rik
|description=CAGE_peak_4_at_2010109K11Rik_5end
|association_with_transcript=122bp_to_NM_001162903...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72123 | |EntrezGene=72123 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9Q4T4 | |UniProt=E9Q4T4 | ||
|association_with_transcript=122bp_to_NM_001162903,uc007nie.2_5end | |||
|cluster_id=chr12:33063776..33063794,+ | |||
|description=CAGE_peak_4_at_2010109K11Rik_5end | |||
|id=chr12:33063776..33063794,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.27e-09!32;CL:0002032!1.27e-09!32;CL:0000037!1.27e-09!32;CL:0000566!1.27e-09!32;CL:0000837!1.27e-09!32;CL:0000063!9.81e-09!66;CL:0002320!8.07e-07!46;CL:0000134!8.07e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.48e-11,32;CL:0002032,1.48e-11,32;CL:0000037,1.48e-11,32;CL:0000837,1.48e-11,32;CL:0002320,1.09e-08,46;CL:0000134,1.09e-08,46;CL:0002031,1.92e-08,25;CL:0000838,2.77e-07,12;CL:0000219,4.19e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.44e-13!48;UBERON:0002390!2.24e-12!45;UBERON:0003061!2.24e-12!45;UBERON:0002405!1.15e-09!70;UBERON:0003081!2.65e-07!88;UBERON:0002371!3.86e-07!16;UBERON:0004119!5.22e-07!130;UBERON:0000925!5.22e-07!130;UBERON:0006595!5.22e-07!130;UBERON:0002384!8.07e-07!46;UBERON:0001474!9.64e-07!22;UBERON:0004765!9.64e-07!22;UBERON:0001434!9.64e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.00e-14,48;UBERON:0002405,1.00e-14,48;UBERON:0002390,8.91e-14,45;UBERON:0003061,8.91e-14,45;UBERON:0004119,9.66e-10,118;UBERON:0000925,9.66e-10,118;UBERON:0006595,9.66e-10,118;UBERON:0001007,2.92e-09,116;UBERON:0001555,2.92e-09,116;UBERON:0007026,2.92e-09,116;UBERON:0002384,1.09e-08,46;UBERON:0004921,1.32e-08,114;UBERON:0002371,4.59e-08,16;UBERON:0000077,5.39e-08,35;UBERON:0001004,1.40e-07,42;UBERON:0000065,1.67e-07,41;UBERON:0001474,2.39e-07,22;UBERON:0004765,2.39e-07,22;UBERON:0001434,2.39e-07,22;UBERON:0003081,2.63e-07,87;UBERON:0004177,4.17e-07,29;UBERON:0005057,4.17e-07,29;UBERON:0003408,4.17e-07,24;UBERON:0002370,4.50e-07,23;UBERON:0000974,4.50e-07,23;UBERON:0004807,4.50e-07,23;UBERON:0005058,4.50e-07,23;UBERON:0003351,4.50e-07,23;UBERON:0009113,4.50e-07,23;UBERON:0003295,4.50e-07,23;UBERON:0009722,4.50e-07,23;UBERON:0005562,4.50e-07,23;UBERON:0007690,4.50e-07,23;UBERON:0005911,7.17e-07,69 | |||
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| ||
|short_description=p4@2010109K11Rik | |||
}} | }} |
Latest revision as of 13:30, 26 September 2015
Short description: | p4@2010109K11Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_2010109K11Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 122bp_to_NM_001162903, uc007nie.2_5end |
EntrezGene: | 2010109K11Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.48e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.48e-11 | 32 |
hematopoietic stem cell | 1.48e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.48e-11 | 32 |
connective tissue cell | 1.09e-08 | 46 |
mesenchymal cell | 1.09e-08 | 46 |
hematopoietic lineage restricted progenitor cell | 1.92e-08 | 25 |
lymphoid lineage restricted progenitor cell | 2.77e-07 | 12 |
motile cell | 4.19e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.00e-14 | 48 |
immune system | 1.00e-14 | 48 |
hematopoietic system | 8.91e-14 | 45 |
blood island | 8.91e-14 | 45 |
endoderm-derived structure | 9.66e-10 | 118 |
endoderm | 9.66e-10 | 118 |
presumptive endoderm | 9.66e-10 | 118 |
digestive system | 2.92e-09 | 116 |
digestive tract | 2.92e-09 | 116 |
primitive gut | 2.92e-09 | 116 |
connective tissue | 1.09e-08 | 46 |
subdivision of digestive tract | 1.32e-08 | 114 |
bone marrow | 4.59e-08 | 16 |
mixed endoderm/mesoderm-derived structure | 5.39e-08 | 35 |
respiratory system | 1.40e-07 | 42 |
respiratory tract | 1.67e-07 | 41 |
bone element | 2.39e-07 | 22 |
skeletal element | 2.39e-07 | 22 |
skeletal system | 2.39e-07 | 22 |
lateral plate mesoderm | 2.63e-07 | 87 |
hemopoietic organ | 4.17e-07 | 29 |
immune organ | 4.17e-07 | 29 |
gland of gut | 4.17e-07 | 24 |
thymus | 4.50e-07 | 23 |
neck | 4.50e-07 | 23 |
respiratory system epithelium | 4.50e-07 | 23 |
hemolymphoid system gland | 4.50e-07 | 23 |
pharyngeal epithelium | 4.50e-07 | 23 |
thymic region | 4.50e-07 | 23 |
pharyngeal gland | 4.50e-07 | 23 |
entire pharyngeal arch endoderm | 4.50e-07 | 23 |
thymus primordium | 4.50e-07 | 23 |
early pharyngeal endoderm | 4.50e-07 | 23 |
endo-epithelium | 7.17e-07 | 69 |