FFCP PHASE1:Mm9::chr14:31439596..31439613,-: Difference between revisions
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|id=chr14:31439596..31439613,-
|short_description=p3@Prkcd
|description=CAGE_peak_3_at_Prkcd_5end
|association_with_transcript=-200bp_to_ENSMUST00000112208_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18753 | |EntrezGene=18753 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=189 | |||
|TSSclassifier=NA | |||
|UniProt=P28867 | |UniProt=P28867 | ||
|association_with_transcript=-200bp_to_ENSMUST00000112208_5end | |||
|cluster_id=chr14:31439596..31439613,- | |||
|description=CAGE_peak_3_at_Prkcd_5end | |||
|id=chr14:31439596..31439613,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.25e-19,3;CL:0000239,1.93e-15,6;CL:0000677,1.93e-15,6;CL:0000584,1.93e-15,6;CL:0000075,2.80e-13,7;CL:0002476,5.55e-13,2;CL:0002563,2.18e-10,9;CL:0002251,2.18e-10,9;CL:0000557,2.90e-08,7;CL:0000473,3.63e-08,7;CL:0002194,6.36e-07,4;CL:0000766,6.36e-07,4;CL:0000234,6.36e-07,4;CL:0000576,6.36e-07,4;CL:0000235,6.36e-07,4;CL:0000864,6.36e-07,4;CL:0002009,6.36e-07,4;CL:0000040,6.36e-07,4;CL:0000559,6.36e-07,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.25e-19,3;UBERON:0002275,2.25e-19,3;UBERON:0003350,2.18e-10,9;UBERON:0004808,2.18e-10,9;UBERON:0001277,2.18e-10,9;UBERON:0000344,1.97e-09,15;UBERON:0000485,1.54e-08,11;UBERON:0001242,2.96e-07,13;UBERON:0001262,2.96e-07,13;UBERON:0004786,2.96e-07,13 | |||
|phase1_expression=0,1.04692622291808,1.36499771816861,1.20985684522732,0,1.00727563147134,0.233612640595526,0,0.281577444303333,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.340173160604279,0.0992909512008853,0,1.11994695955385,0,1.14846392823004,0.430761996159075,0.430942465371778,0,0,0.665191531965914,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0.523523743973798,0,0,0.485510353031154,0.629484089877886,0.405507724878058,0,0,0,0.439372365468944,0.388859798148567,0.139986421625363,0,0.167782606057736,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0,0,0,0.599200221036809,0,0,0.135005938331691,0.210324961351382,0.285650984403804,0,0,0,0,8.8092704799511,20.42997409363,16.2822925251618,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0.681721290312231,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0.776813650941515,0,0,0,0.230615497256059,0.904335843315735,0.352766121407114,0.251333182659351,0,0.144599356919912,0,0,0.662524555381181,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0.239630249011841,1.19980546198682,0.254140454146129,0.898743836428936,0.915001205637253,0,0.521472960576829,0,13.0906468072523,6.81413304884582,0.203678727700633,0.124406970610093,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0,0,0,0,0,0,0,0,0,1.40442637462647,0.257347907114715,0.852490498186778,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0.268412837520744,0.420579897128254,0,0.991256348951394,0.264450566663544,0,0,0,0,0.444756087689741,0,0,0,0.251335208800269,0,0.19496408711912,0.898819408654221,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0.823684239564244,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0.637819074629948,0,0.345369963731791,0.289298117163023,1.50791283939272,3.26343410291226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0.16488625294148,0.322928853391811,0.180938774784468,0.119372344003136,0,0,0,0.341741761595705,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0.679913719975421,0.139951452323658,0.552799895217695,0.954670618015114,0,0,0,0,0,0,0.165306911450672,0,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.632022241256357,0,0,0,0,0.198681354781265,0.240390899039938,0,0,0.15241361331,0.100826185136841,0.38983152295901,0.0962118416403295,0.233753804363138,0,0,0,0,0.19318959403219,0,0.36630324853453,0.428736758158132,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0.412070114477788,0,0,0,0.188626341386076,0,0.128050304809739,0.17230640686684,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0,1.04692622291808,1.36499771816861,1.20985684522732,0,1.00727563147134,0.233612640595526,0,0.281577444303333,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.340173160604279,0.0992909512008853,0,1.11994695955385,0,1.14846392823004,0.430761996159075,0.430942465371778,0,0,0.665191531965914,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0.523523743973798,0,0,0.485510353031154,0.629484089877886,0.405507724878058,0,0,0,0.439372365468944,0.388859798148567,0.139986421625363,0,0.167782606057736,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0,0,0,0.599200221036809,0,0,0.135005938331691,0.210324961351382,0.285650984403804,0,0,0,0,8.8092704799511,20.42997409363,16.2822925251618,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0.681721290312231,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0.776813650941515,0,0,0,0.230615497256059,0.904335843315735,0.352766121407114,0.251333182659351,0,0.144599356919912,0,0,0.662524555381181,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0.239630249011841,1.19980546198682,0.254140454146129,0.898743836428936,0.915001205637253,0,0.521472960576829,0,13.0906468072523,6.81413304884582,0.203678727700633,0.124406970610093,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0,0,0,0,0,0,0,0,0,1.40442637462647,0.257347907114715,0.852490498186778,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0.268412837520744,0.420579897128254,0,0.991256348951394,0.264450566663544,0,0,0,0,0.444756087689741,0,0,0,0.251335208800269,0,0.19496408711912,0.898819408654221,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0.823684239564244,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0.637819074629948,0,0.345369963731791,0.289298117163023,1.50791283939272,3.26343410291226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0.16488625294148,0.322928853391811,0.180938774784468,0.119372344003136,0,0,0,0.341741761595705,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0.679913719975421,0.139951452323658,0.552799895217695,0.954670618015114,0,0,0,0,0,0,0.165306911450672,0,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.632022241256357,0,0,0,0,0.198681354781265,0.240390899039938,0,0,0.15241361331,0.100826185136841,0.38983152295901,0.0962118416403295,0.233753804363138,0,0,0,0,0.19318959403219,0,0.36630324853453,0.428736758158132,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0.412070114477788,0,0,0,0.188626341386076,0,0.128050304809739,0.17230640686684,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p3@Prkcd | |||
}} | }} |
Latest revision as of 20:56, 25 September 2015
Short description: | p3@Prkcd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Prkcd_5end |
Coexpression cluster: | MCL_coexpression_mm9:189 |
Association with transcript: | -200bp_to_ENSMUST00000112208_5end |
EntrezGene: | Prkcd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.25e-19 | 3 |
brush border epithelial cell | 1.93e-15 | 6 |
gut absorptive cell | 1.93e-15 | 6 |
enterocyte | 1.93e-15 | 6 |
columnar/cuboidal epithelial cell | 2.80e-13 | 7 |
bone marrow macrophage | 5.55e-13 | 2 |
intestinal epithelial cell | 2.18e-10 | 9 |
epithelial cell of alimentary canal | 2.18e-10 | 9 |
granulocyte monocyte progenitor cell | 2.90e-08 | 7 |
defensive cell | 3.63e-08 | 7 |
monopoietic cell | 6.36e-07 | 4 |
myeloid leukocyte | 6.36e-07 | 4 |
phagocyte | 6.36e-07 | 4 |
monocyte | 6.36e-07 | 4 |
macrophage | 6.36e-07 | 4 |
tissue-resident macrophage | 6.36e-07 | 4 |
macrophage dendritic cell progenitor | 6.36e-07 | 4 |
monoblast | 6.36e-07 | 4 |
promonocyte | 6.36e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 2.25e-19 | 3 |
reticular formation | 2.25e-19 | 3 |
epithelium of mucosa | 2.18e-10 | 9 |
gastrointestinal system epithelium | 2.18e-10 | 9 |
intestinal epithelium | 2.18e-10 | 9 |
mucosa | 1.97e-09 | 15 |
simple columnar epithelium | 1.54e-08 | 11 |
intestinal mucosa | 2.96e-07 | 13 |
wall of intestine | 2.96e-07 | 13 |
gastrointestinal system mucosa | 2.96e-07 | 13 |