Personal tools

FFCP PHASE1:Mm9::chr16:60605097..60605117,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr16:60605097..60605117,- |short_description=p1@Epha6 |description=CAGE_peak_1_at_Epha6_5end |association_with_transcript=-23bp_to_ENSMUST00000068860_5end |En...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr16:60605097..60605117,-
|DHSsupport=NA
|short_description=p1@Epha6
|DPIdataset=NA
|description=CAGE_peak_1_at_Epha6_5end
|association_with_transcript=-23bp_to_ENSMUST00000068860_5end
|EntrezGene=13840
|EntrezGene=13840
|HGNC=
|HGNC=
|MCL_coexpression_id=362
|TSSclassifier=NA
|UniProt=G1K381
|UniProt=G1K381
|association_with_transcript=-23bp_to_ENSMUST00000068860_5end
|cluster_id=chr16:60605097..60605117,-
|description=CAGE_peak_1_at_Epha6_5end
|id=chr16:60605097..60605117,-
|ontology_enrichment_celltype=CL:0000117!4.00e-11!23;CL:0000337!4.00e-11!23;CL:0000540!5.29e-07!33;CL:0000047!5.29e-07!33;CL:0000031!5.29e-07!33;CL:0000404!5.29e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.65e-11,23;CL:0000337,1.65e-11,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.38e-24!63;UBERON:0001049!4.78e-23!52;UBERON:0005068!4.78e-23!52;UBERON:0006241!4.78e-23!52;UBERON:0007135!4.78e-23!52;UBERON:0003056!2.05e-22!49;UBERON:0000955!2.83e-22!50;UBERON:0006238!2.83e-22!50;UBERON:0002346!5.04e-22!71;UBERON:0003075!5.04e-22!71;UBERON:0007284!5.04e-22!71;UBERON:0002616!2.15e-21!49;UBERON:0000073!1.04e-20!75;UBERON:0001016!1.04e-20!75;UBERON:0001017!1.64e-20!73;UBERON:0005743!1.64e-20!73;UBERON:0003080!4.52e-18!40;UBERON:0004121!8.13e-18!102;UBERON:0000924!8.13e-18!102;UBERON:0006601!8.13e-18!102;UBERON:0002780!2.27e-17!39;UBERON:0001890!2.27e-17!39;UBERON:0006240!2.27e-17!39;UBERON:0002020!6.19e-17!34;UBERON:0007811!1.74e-14!86;UBERON:0000153!2.64e-14!94;UBERON:0002791!8.01e-14!29;UBERON:0003528!8.01e-14!29;UBERON:0001893!8.01e-14!29;UBERON:0002619!1.66e-09!17;UBERON:0002021!1.75e-09!10;UBERON:0000411!1.75e-09!10;UBERON:0001950!1.75e-09!10;UBERON:0000956!3.01e-09!21;UBERON:0001869!3.01e-09!21;UBERON:0000203!3.01e-09!21
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.79e-28,64;UBERON:0003075,2.79e-28,64;UBERON:0007284,2.79e-28,64;UBERON:0000073,2.09e-26,54;UBERON:0001049,3.41e-24,52;UBERON:0005068,3.41e-24,52;UBERON:0006241,3.41e-24,52;UBERON:0007135,3.41e-24,52;UBERON:0010371,7.49e-23,73;UBERON:0003056,1.06e-22,49;UBERON:0001017,4.10e-22,73;UBERON:0004121,6.27e-22,95;UBERON:0000924,6.27e-22,95;UBERON:0006601,6.27e-22,95;UBERON:0001016,4.08e-21,75;UBERON:0000955,4.45e-20,47;UBERON:0006238,4.45e-20,47;UBERON:0002020,4.54e-20,34;UBERON:0002616,5.49e-19,46;UBERON:0003080,6.83e-17,40;UBERON:0002780,5.27e-16,39;UBERON:0001890,5.27e-16,39;UBERON:0006240,5.27e-16,39;UBERON:0003528,8.69e-16,29;UBERON:0002791,8.69e-16,29;UBERON:0001893,8.69e-16,29;UBERON:0010314,5.26e-15,92;UBERON:0002021,7.52e-13,10;UBERON:0000411,7.52e-13,10;UBERON:0001950,7.52e-13,10;UBERON:0002619,6.77e-11,17;UBERON:0000956,1.38e-09,21;UBERON:0001869,1.38e-09,21;UBERON:0000203,1.38e-09,21;UBERON:0003076,5.41e-08,12;UBERON:0003057,5.41e-08,12;UBERON:0002420,7.16e-08,8;UBERON:0007245,7.16e-08,8;UBERON:0010009,7.16e-08,8;UBERON:0010011,7.16e-08,8;UBERON:0000454,7.16e-08,8;UBERON:0000970,8.70e-07,9;UBERON:0000019,8.70e-07,9;UBERON:0000047,8.70e-07,9;UBERON:0010312,8.70e-07,9;UBERON:0004088,8.70e-07,9;UBERON:0002104,8.70e-07,9;UBERON:0001456,8.70e-07,9;UBERON:0003072,8.70e-07,9;UBERON:0004128,8.70e-07,9;UBERON:0003071,8.70e-07,9
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18764069921526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,2.11596391708813,4.43681982454325,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,3.71346279724945,5.07997644188711,1.71487118900936,0.862609239164127,0.919218786610021,14.3150645299205,20.1745994174597,22.4265538554115,1.97829431595291,1.09785172322892,2.6045668527838,9.21303896704557,14.069065250792,15.4326230254578,7.36571463684169,5.55249555116501,2.23679334990361,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.693941307064543,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,3.22058876712702,3.77004072264219,0,0,0,0,12.1330417917906,17.8425235099264,2.1361239859187,27.1165939499951,26.338692105024,17.0386196538839,22.7137768294861,0.81471491080253,0,0,1.05220927943237,3.25301107406759,4.13823787980251,3.06105620669094,2.56198190320716,1.49680298132921,1.15302348256365,1.21812241927647,1.29351685369508,0,0.567318240503458,0.527853372491847,0.43839146485515,0.556094498451196,0,0.205782136407943,3.98068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,91.6864175739595,14.7153595702377,0.330418782983798,0,0.426576501070468,0,0.38660238396628,0,0.444756087689741,0,0,0.164698954724011,0,0,0,0,0,0,0,0.456994050438915,0,0,0.193952487167626,0,0.0632365371242573,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,13.1651483789989,12.3072270921813,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,46.2702695647402,0,4.98583690268315,6.18970445543589,0.494910368917606,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,3.74483566329167,1.62054984628179,0.129358683782755,0.643011105094777,0.886701168211368,1.07021290561242,0.822745103010605,0.304464949114599,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,9.08583979851498,0,0,0,0,0,0,0,0,0,0,0.158167996790568,1.01659733563424,0.216010681643603,0.418176592028937,0,0.269728692769641,0.0826534557253359,0,0,0,0,1.04661582230785,1.15820943319968,1.36115831840833,2.45403664607689,2.02747350588934,1.05621514781179,0.2604087696879,0.104859344425711,0,0,0,0.608175645870493,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,32.7556068717899,21.6352861158373,18.9055519435001,19.5912627871804,28.773465830367,26.4387864086395,23.6257875081132,22.0657389579868,21.2976932222576,32.1011393286128,0.207574695168353,0.399024873401031,1.70733605754134,0.243106717068294,0.628839487883947,0.367687016900028,2.66696073361938,1.85431551515005,1.92551525755089,0.758091635291392,1.52087579934144,1.69763707247469,1.31098110457835,1.40855335290712,1.43588672389033,0,1.27472758539341,2.12200142510076,2.06042950401653,1.32479028120958,0.342869252385415,1.4198064492747,0.715308569841963,1.30811774969096,1.31753132581463,1.35383372626682,0.73171189149109,1.31534855718921,1.08643291076689,1.68342681497322,1.06771516311757,1.47756723563345,2.86461730218783,1.23949472948773,2.3148793317737,1.24905288968973,0.935726433781634,0.214871054048298,0.57386499620653,0.661774257358546,0.231867835620421
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18764069921526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,2.11596391708813,4.43681982454325,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,3.71346279724945,5.07997644188711,1.71487118900936,0.862609239164127,0.919218786610021,14.3150645299205,20.1745994174597,22.4265538554115,1.97829431595291,1.09785172322892,2.6045668527838,9.21303896704557,14.069065250792,15.4326230254578,7.36571463684169,5.55249555116501,2.23679334990361,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.693941307064543,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,3.22058876712702,3.77004072264219,0,0,0,0,12.1330417917906,17.8425235099264,2.1361239859187,27.1165939499951,26.338692105024,17.0386196538839,22.7137768294861,0.81471491080253,0,0,1.05220927943237,3.25301107406759,4.13823787980251,3.06105620669094,2.56198190320716,1.49680298132921,1.15302348256365,1.21812241927647,1.29351685369508,0,0.567318240503458,0.527853372491847,0.43839146485515,0.556094498451196,0,0.205782136407943,3.98068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,91.6864175739595,14.7153595702377,0.330418782983798,0,0.426576501070468,0,0.38660238396628,0,0.444756087689741,0,0,0.164698954724011,0,0,0,0,0,0,0,0.456994050438915,0,0,0.193952487167626,0,0.0632365371242573,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,13.1651483789989,12.3072270921813,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,46.2702695647402,0,4.98583690268315,6.18970445543589,0.494910368917606,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,3.74483566329167,1.62054984628179,0.129358683782755,0.643011105094777,0.886701168211368,1.07021290561242,0.822745103010605,0.304464949114599,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,9.08583979851498,0,0,0,0,0,0,0,0,0,0,0.158167996790568,1.01659733563424,0.216010681643603,0.418176592028937,0,0.269728692769641,0.0826534557253359,0,0,0,0,1.04661582230785,1.15820943319968,1.36115831840833,2.45403664607689,2.02747350588934,1.05621514781179,0.2604087696879,0.104859344425711,0,0,0,0.608175645870493,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,32.7556068717899,21.6352861158373,18.9055519435001,19.5912627871804,28.773465830367,26.4387864086395,23.6257875081132,22.0657389579868,21.2976932222576,32.1011393286128,0.207574695168353,0.399024873401031,1.70733605754134,0.243106717068294,0.628839487883947,0.367687016900028,2.66696073361938,1.85431551515005,1.92551525755089,0.758091635291392,1.52087579934144,1.69763707247469,1.31098110457835,1.40855335290712,1.43588672389033,0,1.27472758539341,2.12200142510076,2.06042950401653,1.32479028120958,0.342869252385415,1.4198064492747,0.715308569841963,1.30811774969096,1.31753132581463,1.35383372626682,0.73171189149109,1.31534855718921,1.08643291076689,1.68342681497322,1.06771516311757,1.47756723563345,2.86461730218783,1.23949472948773,2.3148793317737,1.24905288968973,0.935726433781634,0.214871054048298,0.57386499620653,0.661774257358546,0.231867835620421
|short_description=p1@Epha6
}}
}}

Latest revision as of 16:59, 25 September 2015

Short description:p1@Epha6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Epha6_5end
Coexpression cluster:MCL_coexpression_mm9:362
Association with transcript: -23bp_to_ENSMUST00000068860_5end
EntrezGene:Epha6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Epha6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D722.43
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.21
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A412.13
corpus striatum, adult.CNhs10487.19-21D817.84
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D527.12
cortex, neonate N30.CNhs11107.1392-42F226.34
diencephalon, adult.CNhs10482.20-12F217.04
diencephalon, neonate N30.CNhs11201.1388-42B222.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C63.25
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I63.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E891.69
hippocampus, neonate N00.CNhs11228.627-43G114.72
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C213.17
medulla oblongata, neonate N30.CNhs11200.1396-42A312.31
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I946.27
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I46.19
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C99.09
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.76
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.91
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.59
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.77
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A526.44
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A623.63
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A821.30
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A932.10
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.65e-1123
neuroblast (sensu Vertebrata)1.65e-1123

Uber anatomy
Ontology termp-valuen
neurectoderm2.79e-2864
neural plate2.79e-2864
presumptive neural plate2.79e-2864
regional part of nervous system2.09e-2654
neural tube3.41e-2452
neural rod3.41e-2452
future spinal cord3.41e-2452
neural keel3.41e-2452
ecto-epithelium7.49e-2373
pre-chordal neural plate1.06e-2249
central nervous system4.10e-2273
ectoderm-derived structure6.27e-2295
ectoderm6.27e-2295
presumptive ectoderm6.27e-2295
nervous system4.08e-2175
brain4.45e-2047
future brain4.45e-2047
gray matter4.54e-2034
regional part of brain5.49e-1946
anterior neural tube6.83e-1740
regional part of forebrain5.27e-1639
forebrain5.27e-1639
future forebrain5.27e-1639
brain grey matter8.69e-1629
regional part of telencephalon8.69e-1629
telencephalon8.69e-1629
structure with developmental contribution from neural crest5.26e-1592
occipital lobe7.52e-1310
visual cortex7.52e-1310
neocortex7.52e-1310
regional part of cerebral cortex6.77e-1117
cerebral cortex1.38e-0921
cerebral hemisphere1.38e-0921
pallium1.38e-0921
posterior neural tube5.41e-0812
chordal neural plate5.41e-0812
basal ganglion7.16e-088
nuclear complex of neuraxis7.16e-088
aggregate regional part of brain7.16e-088
collection of basal ganglia7.16e-088
cerebral subcortex7.16e-088
eye8.70e-079
camera-type eye8.70e-079
simple eye8.70e-079
immature eye8.70e-079
ocular region8.70e-079
visual system8.70e-079
face8.70e-079
optic cup8.70e-079
optic vesicle8.70e-079
eye primordium8.70e-079
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:60605097..60605117,-&oldid=4203322"