FFCP PHASE1:Mm9::chr18:65590666..65590691,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:65590666..65590691,+
|short_description=p1@Malt1
|description=CAGE_peak_1_at_Malt1_5end
|association_with_transcript=15bp_to_ENSMUST00000102868,NM_172833,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=240354 | |EntrezGene=240354 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=266 | |||
|TSSclassifier=NA | |||
|UniProt=Q2TBA3,Q8BRB5 | |UniProt=Q2TBA3,Q8BRB5 | ||
|association_with_transcript=15bp_to_ENSMUST00000102868,NM_172833,uc008fex.1,uc008fey.1,uc008fez.1,uc008ffa.1,uc012bed.1_5end | |||
|cluster_id=chr18:65590666..65590691,+ | |||
|description=CAGE_peak_1_at_Malt1_5end | |||
|id=chr18:65590666..65590691,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.20e-09!32;CL:0002032!1.20e-09!32;CL:0000037!1.20e-09!32;CL:0000566!1.20e-09!32;CL:0000837!1.20e-09!32;CL:0000838!3.97e-09!12;CL:0000084!1.95e-08!11;CL:0000827!1.95e-08!11;CL:0000542!9.47e-08!13;CL:0000051!9.47e-08!13;CL:0002031!1.52e-07!25;CL:0000791!2.57e-07!9;CL:0000789!2.57e-07!9;CL:0002420!2.57e-07!9;CL:0002419!2.57e-07!9;CL:0000790!2.57e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.59e-10,32;CL:0002032,2.59e-10,32;CL:0000037,2.59e-10,32;CL:0000837,2.59e-10,32;CL:0000838,2.04e-09,12;CL:0000084,1.06e-08,11;CL:0000827,1.06e-08,11;CL:0002031,4.36e-08,25;CL:0000542,4.94e-08,13;CL:0000051,4.94e-08,13;CL:0000791,1.55e-07,9;CL:0000789,1.55e-07,9;CL:0002420,1.55e-07,9;CL:0002419,1.55e-07,9;CL:0000790,1.55e-07,9;CL:0000624,7.13e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.07e-12!48;UBERON:0003081!4.98e-11!88;UBERON:0002390!1.37e-10!45;UBERON:0003061!1.37e-10!45;UBERON:0001007!1.59e-08!128;UBERON:0001555!1.59e-08!128;UBERON:0007026!1.59e-08!128;UBERON:0004119!1.71e-08!130;UBERON:0000925!1.71e-08!130;UBERON:0006595!1.71e-08!130;UBERON:0002405!4.23e-08!70;UBERON:0004921!5.49e-08!126;UBERON:0004185!5.49e-08!126;UBERON:0004177!7.60e-08!29;UBERON:0000926!9.18e-08!193;UBERON:0004120!9.18e-08!193;UBERON:0006603!9.18e-08!193;UBERON:0001004!9.38e-07!42;UBERON:0000072!9.76e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.79e-12,48;UBERON:0002405,1.79e-12,48;UBERON:0002390,3.46e-11,45;UBERON:0003061,3.46e-11,45;UBERON:0003081,1.32e-10,87;UBERON:0001007,2.40e-09,116;UBERON:0001555,2.40e-09,116;UBERON:0007026,2.40e-09,116;UBERON:0004119,3.28e-09,118;UBERON:0000925,3.28e-09,118;UBERON:0006595,3.28e-09,118;UBERON:0000077,5.92e-09,35;UBERON:0004921,9.13e-09,114;UBERON:0004177,1.90e-08,29;UBERON:0005057,1.90e-08,29;UBERON:0000926,2.64e-07,120;UBERON:0004120,2.64e-07,120;UBERON:0006603,2.64e-07,120;UBERON:0000072,2.81e-07,27 | |||
|phase1_expression=1.12104192973356,5.23463111459042,7.27998783023258,2.11724947914781,3.50627010962443,5.70789524500425,4.90586545250604,22.9839515726006,163.737283862388,176.016523794139,59.7550709107012,28.0797999663584,49.134609490256,40.9127483320908,8.99396356902289,10.3262386368811,4.19737126876888,60.4110046661025,64.8551270955144,43.2877444833991,1.27564935226605,21.1489726057886,15.9331871374751,3.67982572424835,6.42345986988076,6.31655160526522,3.87685796543167,4.74036711908956,2.47030445293286,1.76421090831952,4.8780712344167,0,0.61506478758457,0,5.19932915552294,1.32987716286794,4.90006455029686,12.1374172913703,6.2506827561904,9.42342739152837,17.0587131528994,16.3930916390027,11.6522484727477,0.755380907853464,0.506884656097573,0.734187008646726,0,0,0,0,0,0,70.9720423624225,31.9159342484992,37.9785993030984,0.514518872071894,0,0.515672092277442,0,0,0,0,0,1.7997994345628,1.97773272513395,0.7104801149461,0.599200221036809,0,0,0,0,0.285650984403804,0.662605622854841,0,0.191690942036473,0,0,0.383062014255563,0.307213066512487,0.263772575460388,0.0914876436024097,0.52091337055676,0,1.12552522006336,0.45839474333043,0.883885756421003,0,0.559198337475902,0.454357159999104,0.151143120213571,4.63783181922684,2.58127163094416,0,0,0.649776417447669,0.896053774194671,1.26399978118577,0.340860645156116,0,0,1.12674735821344,0,2.54805239706646,0,4.97929394325792,4.81383744402687,4.54972000513305,2.51204535381932,36.7691794778984,1.7813056687779,0.173485326766136,0.304465478312141,0.691846491768175,0.753613202763113,2.3517741427141,1.0053327306374,3.95511948374998,2.89198713839823,5.30766331169925,2.10296904931632,4.19598885074748,2.90925151881133,1.86391761218122,0.585561594023094,0.628340120440365,5.10914110417183,23.0045039051367,16.7972764678154,18.1710424714483,0.149790639404823,0,0,0,0.255715457330331,0.41557608911912,0.324482526135515,1.62942982160506,4.85187185379363,2.0217820674694,4.20883711772948,1.04096354370163,1.14951052216736,0.180062129805349,0.30140963567143,1.02054748726992,0.896796041993948,1.03071897015702,5.17406741478031,0.215567992932842,0.756424320671277,0.175951124163949,1.09597866213787,1.66828349535359,1.74126083261083,2.26360350048738,1.19420560091096,4.91549231119264,9.52187256324446,16.4814829649444,5.38527008592305,3.98694301967864,3.06105504483725,5.20838418287463,3.14822770795846,2.77680803197281,2.79040733700489,2.14618721119695,5.83826711835847,3.78487654801005,3.11918181750281,2.26992666728396,2.63159977365598,2.19550115291051,2.14730270016595,0.210289948564127,0.308713837137853,1.98251269790279,1.32225283331772,0.213288250535234,1.16118335930219,2.31961430379768,2.62188582010345,3.11329261382818,2.28270751335071,1.89811624617805,2.30578536613615,2.5133520880027,5.17286827306992,4.28920991662064,1.79763881730844,0.864552199498777,1.39398891278057,0.189667900953082,1.82797620175566,1.1270773567308,2.03651327845314,1.55161989734101,1.40271639780637,2.59269802209455,1.91893192373483,1.72698600625512,2.34454611451421,1.48226313543574,1.00107063429656,0.786235980452812,1.57403478669398,1.82574109249653,2.17059443777175,1.2731292589071,1.72617682470486,2.91843408195064,1.64736847912849,1.43768206527355,3.72140947668503,3.43241440426017,0.757736633841335,0.896987067609561,1.92977408545347,6.28160846566456,0.947457058852424,1.62964976442026,0.848725428875941,0.938760993154008,1.67506257441816,1.19021820443007,0.780534591431195,2.52216230569906,2.6575762757853,3.18909537314974,3.11340297959902,7.25276923836761,5.78596234326046,4.52373851817817,12.5098307278303,4.91764273019036,3.86311444826625,0.321101179975584,0.117211686592203,0.163934945376675,3.02965112645248,0.631016438832513,0,0,0,0.222798674082394,0,0.404810701674894,0,0.790575555893047,0.321321316421807,1.70328102249922,0.534196811001766,2.11753047159649,1.48473110675282,0,1.21390318077491,1.209294227859,0.943025398779491,0.295301892880773,0.922305443831782,1.55056975900933,2.18120237686503,1.06949213515416,3.16036757935816,1.05418608574999,2.06271086496374,2.7235168460303,1.44048875225048,1.16422815404479,0.643011105094777,2.12808280370728,1.07021290561242,2.13913726782757,0.608929898229199,3.75474732901937,0.63549621259146,3.74898276693435,4.45192882941996,4.52100394748536,2.95533332147964,2.50681922406587,5.25250879184196,3.20628920292836,0,14.6948957486153,2.68302928352189,3.33350149265481,7.91147519419702,14.7629765938707,11.6676868335327,35.5254918687158,37.5069892227403,27.7781947346892,0.954670618015114,1.10717597753397,1.01659733563424,2.26811215725783,2.92723614420256,3.49380101993884,1.07891477107857,2.23164330458407,2.09404753587224,2.59229946583586,12.4267862617385,0,0.598066184175915,0.330916980914195,0.777804753376191,0.645799117388655,2.19642963138012,1.05621514781179,1.69265700297135,2.30690557736564,0.483168241652012,0.864090018773596,6.00421129193539,1.21635129174099,1.74608627180206,1.94881234466693,3.58053391334963,1.98681354781265,6.00977247599844,5.1691334511102,5.04832249740738,4.87723562591999,4.839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| |phase1_expression=1.12104192973356,5.23463111459042,7.27998783023258,2.11724947914781,3.50627010962443,5.70789524500425,4.90586545250604,22.9839515726006,163.737283862388,176.016523794139,59.7550709107012,28.0797999663584,49.134609490256,40.9127483320908,8.99396356902289,10.3262386368811,4.19737126876888,60.4110046661025,64.8551270955144,43.2877444833991,1.27564935226605,21.1489726057886,15.9331871374751,3.67982572424835,6.42345986988076,6.31655160526522,3.87685796543167,4.74036711908956,2.47030445293286,1.76421090831952,4.8780712344167,0,0.61506478758457,0,5.19932915552294,1.32987716286794,4.90006455029686,12.1374172913703,6.2506827561904,9.42342739152837,17.0587131528994,16.3930916390027,11.6522484727477,0.755380907853464,0.506884656097573,0.734187008646726,0,0,0,0,0,0,70.9720423624225,31.9159342484992,37.9785993030984,0.514518872071894,0,0.515672092277442,0,0,0,0,0,1.7997994345628,1.97773272513395,0.7104801149461,0.599200221036809,0,0,0,0,0.285650984403804,0.662605622854841,0,0.191690942036473,0,0,0.383062014255563,0.307213066512487,0.263772575460388,0.0914876436024097,0.52091337055676,0,1.12552522006336,0.45839474333043,0.883885756421003,0,0.559198337475902,0.454357159999104,0.151143120213571,4.63783181922684,2.58127163094416,0,0,0.649776417447669,0.896053774194671,1.26399978118577,0.340860645156116,0,0,1.12674735821344,0,2.54805239706646,0,4.97929394325792,4.81383744402687,4.54972000513305,2.51204535381932,36.7691794778984,1.7813056687779,0.173485326766136,0.304465478312141,0.691846491768175,0.753613202763113,2.3517741427141,1.0053327306374,3.95511948374998,2.89198713839823,5.30766331169925,2.10296904931632,4.19598885074748,2.90925151881133,1.86391761218122,0.585561594023094,0.628340120440365,5.10914110417183,23.0045039051367,16.7972764678154,18.1710424714483,0.149790639404823,0,0,0,0.255715457330331,0.41557608911912,0.324482526135515,1.62942982160506,4.85187185379363,2.0217820674694,4.20883711772948,1.04096354370163,1.14951052216736,0.180062129805349,0.30140963567143,1.02054748726992,0.896796041993948,1.03071897015702,5.17406741478031,0.215567992932842,0.756424320671277,0.175951124163949,1.09597866213787,1.66828349535359,1.74126083261083,2.26360350048738,1.19420560091096,4.91549231119264,9.52187256324446,16.4814829649444,5.38527008592305,3.98694301967864,3.06105504483725,5.20838418287463,3.14822770795846,2.77680803197281,2.79040733700489,2.14618721119695,5.83826711835847,3.78487654801005,3.11918181750281,2.26992666728396,2.63159977365598,2.19550115291051,2.14730270016595,0.210289948564127,0.308713837137853,1.98251269790279,1.32225283331772,0.213288250535234,1.16118335930219,2.31961430379768,2.62188582010345,3.11329261382818,2.28270751335071,1.89811624617805,2.30578536613615,2.5133520880027,5.17286827306992,4.28920991662064,1.79763881730844,0.864552199498777,1.39398891278057,0.189667900953082,1.82797620175566,1.1270773567308,2.03651327845314,1.55161989734101,1.40271639780637,2.59269802209455,1.91893192373483,1.72698600625512,2.34454611451421,1.48226313543574,1.00107063429656,0.786235980452812,1.57403478669398,1.82574109249653,2.17059443777175,1.2731292589071,1.72617682470486,2.91843408195064,1.64736847912849,1.43768206527355,3.72140947668503,3.43241440426017,0.757736633841335,0.896987067609561,1.92977408545347,6.28160846566456,0.947457058852424,1.62964976442026,0.848725428875941,0.938760993154008,1.67506257441816,1.19021820443007,0.780534591431195,2.52216230569906,2.6575762757853,3.18909537314974,3.11340297959902,7.25276923836761,5.78596234326046,4.52373851817817,12.5098307278303,4.91764273019036,3.86311444826625,0.321101179975584,0.117211686592203,0.163934945376675,3.02965112645248,0.631016438832513,0,0,0,0.222798674082394,0,0.404810701674894,0,0.790575555893047,0.321321316421807,1.70328102249922,0.534196811001766,2.11753047159649,1.48473110675282,0,1.21390318077491,1.209294227859,0.943025398779491,0.295301892880773,0.922305443831782,1.55056975900933,2.18120237686503,1.06949213515416,3.16036757935816,1.05418608574999,2.06271086496374,2.7235168460303,1.44048875225048,1.16422815404479,0.643011105094777,2.12808280370728,1.07021290561242,2.13913726782757,0.608929898229199,3.75474732901937,0.63549621259146,3.74898276693435,4.45192882941996,4.52100394748536,2.95533332147964,2.50681922406587,5.25250879184196,3.20628920292836,0,14.6948957486153,2.68302928352189,3.33350149265481,7.91147519419702,14.7629765938707,11.6676868335327,35.5254918687158,37.5069892227403,27.7781947346892,0.954670618015114,1.10717597753397,1.01659733563424,2.26811215725783,2.92723614420256,3.49380101993884,1.07891477107857,2.23164330458407,2.09404753587224,2.59229946583586,12.4267862617385,0,0.598066184175915,0.330916980914195,0.777804753376191,0.645799117388655,2.19642963138012,1.05621514781179,1.69265700297135,2.30690557736564,0.483168241652012,0.864090018773596,6.00421129193539,1.21635129174099,1.74608627180206,1.94881234466693,3.58053391334963,1.98681354781265,6.00977247599844,5.1691334511102,5.04832249740738,4.87723562591999,4.839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| ||
|short_description=p1@Malt1 | |||
}} | }} |
Latest revision as of 15:29, 1 October 2015
Short description: | p1@Malt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Malt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:266 |
Association with transcript: | 15bp_to_ENSMUST00000102868, NM_172833, uc008fex.1, uc008fey.1, uc008fez.1, uc008ffa.1, uc012bed.1_5end |
EntrezGene: | Malt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.59e-10 | 32 |
hematopoietic oligopotent progenitor cell | 2.59e-10 | 32 |
hematopoietic stem cell | 2.59e-10 | 32 |
hematopoietic multipotent progenitor cell | 2.59e-10 | 32 |
lymphoid lineage restricted progenitor cell | 2.04e-09 | 12 |
T cell | 1.06e-08 | 11 |
pro-T cell | 1.06e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 4.36e-08 | 25 |
lymphocyte | 4.94e-08 | 13 |
common lymphoid progenitor | 4.94e-08 | 13 |
mature alpha-beta T cell | 1.55e-07 | 9 |
alpha-beta T cell | 1.55e-07 | 9 |
immature T cell | 1.55e-07 | 9 |
mature T cell | 1.55e-07 | 9 |
immature alpha-beta T cell | 1.55e-07 | 9 |
CD4-positive, alpha-beta T cell | 7.13e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.79e-12 | 48 |
immune system | 1.79e-12 | 48 |
hematopoietic system | 3.46e-11 | 45 |
blood island | 3.46e-11 | 45 |
lateral plate mesoderm | 1.32e-10 | 87 |
digestive system | 2.40e-09 | 116 |
digestive tract | 2.40e-09 | 116 |
primitive gut | 2.40e-09 | 116 |
endoderm-derived structure | 3.28e-09 | 118 |
endoderm | 3.28e-09 | 118 |
presumptive endoderm | 3.28e-09 | 118 |
mixed endoderm/mesoderm-derived structure | 5.92e-09 | 35 |
subdivision of digestive tract | 9.13e-09 | 114 |
hemopoietic organ | 1.90e-08 | 29 |
immune organ | 1.90e-08 | 29 |
mesoderm | 2.64e-07 | 120 |
mesoderm-derived structure | 2.64e-07 | 120 |
presumptive mesoderm | 2.64e-07 | 120 |
segment of respiratory tract | 2.81e-07 | 27 |