FFCP PHASE1:Mm9::chr19:41338421..41338498,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:41338421..41338498,-
|short_description=p1@Tm9sf3
|description=CAGE_peak_1_at_Tm9sf3_5end
|association_with_transcript=0bp_to_ENSMUST00000025989,ENSMUST00...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=107358 | |EntrezGene=107358 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9ET30,Q8C6F5,Q3UH23,Q571B0 | |UniProt=Q9ET30,Q8C6F5,Q3UH23,Q571B0 | ||
|association_with_transcript=0bp_to_ENSMUST00000025989,ENSMUST00000067800,ENSMUST00000164316,NM_133352,uc008hls.1,uc008hlt.1_5end | |||
|cluster_id=chr19:41338421..41338498,- | |||
|description=CAGE_peak_1_at_Tm9sf3_5end | |||
|id=chr19:41338421..41338498,- | |||
|ontology_enrichment_celltype=CL:0000066!6.48e-11!25;CL:0000223!7.79e-09!20;CL:0002076!4.23e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.48e-11,25;CL:0000223,7.79e-09,20;CL:0002076,4.23e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.50e-17!43;UBERON:0004119!7.71e-17!130;UBERON:0000925!7.71e-17!130;UBERON:0006595!7.71e-17!130;UBERON:0001007!5.22e-16!128;UBERON:0001555!5.22e-16!128;UBERON:0007026!5.22e-16!128;UBERON:0004921!5.74e-15!126;UBERON:0004185!5.74e-15!126;UBERON:0005409!1.07e-14!59;UBERON:0000344!1.38e-09!15;UBERON:0002108!1.05e-08!16;UBERON:0001242!1.86e-08!13;UBERON:0000060!1.86e-08!13;UBERON:0001262!1.86e-08!13;UBERON:0004786!1.86e-08!13;UBERON:0003104!3.61e-08!131;UBERON:0009142!3.61e-08!131;UBERON:0001045!8.95e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.81e-12,118;UBERON:0000925,6.81e-12,118;UBERON:0006595,6.81e-12,118;UBERON:0000160,8.32e-12,31;UBERON:0001007,3.43e-11,116;UBERON:0001555,3.43e-11,116;UBERON:0007026,3.43e-11,116;UBERON:0004921,2.56e-10,114;UBERON:0005409,9.71e-10,47;UBERON:0000344,1.38e-09,15;UBERON:0001242,1.86e-08,13;UBERON:0001262,1.86e-08,13;UBERON:0004786,1.86e-08,13 | |||
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|phase1_expression=83.2774004944929,162.971515367582,176.53970488314,116.751185564436,136.744534275353,206.323625179713,182.21785966451,58.1054955487093,139.099257485847,129.20361852974,101.532255157724,82.4844124011778,61.2898613153717,50.6164130005995,38.6407323706169,30.5737653758637,20.9868563438444,48.2657112998104,56.2169177783529,53.0487064747538,46.4336364224841,51.929167478063,45.7099630993137,145.593104742,153.933627596071,175.140749055081,233.903763914378,168.283032727679,215.866604502441,291.59886013224,240.799334571661,20.3209815507082,15.3766196896143,15.8481681015439,110.341318744987,119.688944658114,116.989041138337,124.303894328862,99.2295887545227,129.310364761528,147.646103495785,135.243006021772,124.776160729006,80.4480666863939,82.2166912190263,109.760957792686,25.0365230191373,39.8986036176217,43.2781779986909,67.6616048778506,40.4560758497298,35.9381410912429,59.3950425444387,69.6347656330891,48.3975070765148,142.521727563915,89.6849667008309,109.838155655095,29.5382032855013,25.3915670050576,27.2547503507657,47.7770790217476,30.2360230677787,33.2962895394118,27.6882581518753,30.5506449426823,22.1704081783619,25.3584081512226,34.73602012334,19.1708432431001,30.4971193959504,33.1355141908412,31.8050698970323,27.0704666265048,31.5331599649998,19.3035945188104,36.3382407297983,64.4821057330198,65.2827766339035,25.0583946687368,35.4972057177349,39.5894161623138,45.7860118362265,45.0210088025344,55.3129656952053,55.3901740690495,51.5385484492753,45.1086658897227,105.410861119792,101.417033663306,91.5971784297302,101.530017483804,53.7177353629123,104.162715986099,128.655730654638,99.0139420485112,69.6604323853489,92.2028045147292,80.7934474314922,97.1683829903436,80.2807492727079,89.8285341900225,249.709134912513,391.086686734332,94.3900938808894,100.330506728139,88.9723023226019,114.983166877093,68.3596012828533,55.07203359305,57.5971284863571,45.365356268509,57.8844898112707,57.123880769444,52.0917972611172,69.2422918226512,83.304704126484,59.5749350510036,47.7689698052932,85.7364304721269,61.8356251689102,52.8514025917392,137.92990330141,33.6697916563279,42.7271281899448,135.136782205345,103.999528071139,70.1886195262287,74.8443637460351,36.6987066541816,45.292559679044,39.832429619778,39.9795936442236,64.6960107045736,42.8043371792694,48.9968614464628,70.5746791482692,61.2082295401658,70.2569268445616,59.9759289276451,39.1662533317738,40.9225745891582,50.9575827349138,49.2804754322788,50.6191553685879,47.786417666249,46.1012484833866,39.0642089815914,28.8861110530009,39.1449585947386,42.7561231718396,48.2230611340665,52.550930103638,61.9888856409456,69.5543621058849,43.58850443325,78.6478769790823,77.4617200415293,77.0083083362056,45.1534184127394,44.7944774563894,50.5974392705452,45.4549892323604,46.0428302288925,51.5252157043843,49.7622641765873,39.9727368085433,52.7779347499606,51.3426731730059,51.5485837208359,48.5602169179676,45.760596064129,42.1536221358817,39.3224806967889,41.4271198671331,41.7792726259895,143.732170597952,153.116878098192,42.870938357582,49.0019377625525,58.8924298241966,75.0262711598834,71.3833520742034,89.4060442729028,150.900241571155,91.243220917102,100.534083520108,89.5304124185179,99.6266485178704,125.834717211591,140.489732418551,147.961966027995,23.8981555200883,56.2102682039866,42.8289395557706,60.0771417143677,57.6038886887848,68.3824243930606,80.5001117591795,92.5515627832106,82.8953283002459,85.0206459421206,81.524472448966,42.0449666404557,44.0292149053575,42.4989392407374,52.5407714396223,45.3413060334544,54.9991839847867,50.059127916441,47.5056214450854,63.1491250332587,89.1362880469598,71.0789210046841,75.5131168937237,94.7170792301669,76.6026955738565,90.2169384949497,66.5111484599777,54.5735265898996,53.1265823201004,53.6394471049595,49.7543326371624,63.1498590555645,49.7511209451769,82.7366666917067,72.5121662888479,73.3048122737445,86.424484612358,65.5453258862952,77.3628718759212,80.1355784541574,49.7611236999598,60.9174365876955,117.53166125155,123.067788851911,37.0871862871799,47.8223681296189,89.8363500664181,53.5238365673271,44.4866589376922,46.0717718270033,43.5155263420254,48.032728388463,42.1089494015725,56.3322296269777,45.3387985875882,49.0989841291004,58.897878914032,37.5945940213514,67.8473607295524,34.900858318782,56.5217748956909,60.2140948849754,185.843193675948,69.4352619403247,71.650683000646,125.04516787816,106.89928522284,120.822013141963,104.66345873313,143.959356873092,129.765045732039,160.230636273459,189.753495434998,208.333797361337,56.8534141608826,49.5168008586103,30.1405733213818,47.1541477069503,57.1035552328121,54.0457517334274,58.4149023137529,34.1000743008351,99.2661325109495,127.099242518292,320.648290771915,65.7896149236505,67.0077370788008,69.6011153670919,55.8662569934679,60.7321329056727,131.166376483433,47.28345201268,42.7177201994632,57.1691624258126,55.1879691561741,30.7040584917646,39.3679375836552,39.1210676183154,110.485979496006,105.663346504362,108.625179410277,113.605803543799,41.7563511527099,67.9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| ||
|short_description=p1@Tm9sf3 | |||
}} | }} |
Latest revision as of 18:24, 25 September 2015
Short description: | p1@Tm9sf3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tm9sf3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000025989, ENSMUST00000067800, ENSMUST00000164316, NM_133352, uc008hls.1, uc008hlt.1_5end |
EntrezGene: | Tm9sf3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.48e-11 | 25 |
endodermal cell | 7.79e-09 | 20 |
endo-epithelial cell | 4.23e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 6.81e-12 | 118 |
endoderm | 6.81e-12 | 118 |
presumptive endoderm | 6.81e-12 | 118 |
intestine | 8.32e-12 | 31 |
digestive system | 3.43e-11 | 116 |
digestive tract | 3.43e-11 | 116 |
primitive gut | 3.43e-11 | 116 |
subdivision of digestive tract | 2.56e-10 | 114 |
gastrointestinal system | 9.71e-10 | 47 |
mucosa | 1.38e-09 | 15 |
intestinal mucosa | 1.86e-08 | 13 |
wall of intestine | 1.86e-08 | 13 |
gastrointestinal system mucosa | 1.86e-08 | 13 |