FFCP PHASE1:Mm9::chr2:28048491..28048505,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:28048491..28048505,+
|short_description=p9@Olfm1
|description=CAGE_peak_9_at_Olfm1_5end
|association_with_transcript=-6bp_to_ENSMUST00000113920,ENSMUST0000...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56177 | |EntrezGene=56177 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=A3KGE4 | |UniProt=A3KGE4 | ||
|association_with_transcript=-6bp_to_ENSMUST00000113920,ENSMUST00000152415_5end | |||
|cluster_id=chr2:28048491..28048505,+ | |||
|description=CAGE_peak_9_at_Olfm1_5end | |||
|id=chr2:28048491..28048505,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.95e-15!44;CL:0000133!2.95e-15!44;CL:0002319!4.32e-15!43;CL:0000117!7.97e-15!23;CL:0000337!7.97e-15!23;CL:0000055!2.59e-13!50;CL:0000540!7.49e-13!33;CL:0000047!7.49e-13!33;CL:0000031!7.49e-13!33;CL:0000404!7.49e-13!33;CL:0000393!1.15e-11!39;CL:0000211!1.15e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.11e-23,23;CL:0000337,4.11e-23,23;CL:0002319,2.00e-16,43;CL:0000540,2.15e-16,33;CL:0000047,2.15e-16,33;CL:0000031,2.15e-16,33;CL:0000404,2.15e-16,33;CL:0000221,7.73e-16,44;CL:0000133,7.73e-16,44;CL:0000393,1.17e-12,39;CL:0000211,1.17e-12,39;CL:0002321,8.77e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.35e-33!73;UBERON:0005743!4.35e-33!73;UBERON:0000073!4.62e-33!75;UBERON:0001016!4.62e-33!75;UBERON:0004121!3.34e-31!102;UBERON:0000924!3.34e-31!102;UBERON:0006601!3.34e-31!102;UBERON:0002346!4.79e-31!71;UBERON:0003075!4.79e-31!71;UBERON:0007284!4.79e-31!71;UBERON:0001049!4.71e-29!52;UBERON:0005068!4.71e-29!52;UBERON:0006241!4.71e-29!52;UBERON:0007135!4.71e-29!52;UBERON:0000033!1.23e-28!63;UBERON:0000955!4.36e-27!50;UBERON:0006238!4.36e-27!50;UBERON:0002616!1.67e-26!49;UBERON:0003056!2.05e-23!49;UBERON:0003080!1.45e-21!40;UBERON:0002020!3.68e-21!34;UBERON:0002780!6.74e-21!39;UBERON:0001890!6.74e-21!39;UBERON:0006240!6.74e-21!39;UBERON:0002791!8.72e-18!29;UBERON:0003528!8.72e-18!29;UBERON:0001893!8.72e-18!29;UBERON:0007811!6.59e-15!86;UBERON:0000153!8.44e-15!94;UBERON:0000956!2.19e-12!21;UBERON:0001869!2.19e-12!21;UBERON:0000203!2.19e-12!21;UBERON:0002619!3.26e-10!17;UBERON:0003076!6.93e-08!12;UBERON:0003057!6.93e-08!12;UBERON:0002021!6.14e-07!10;UBERON:0000411!6.14e-07!10;UBERON:0001950!6.14e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.15e-43,54;UBERON:0001049,9.18e-42,52;UBERON:0005068,9.18e-42,52;UBERON:0006241,9.18e-42,52;UBERON:0007135,9.18e-42,52;UBERON:0001017,1.26e-41,73;UBERON:0001016,1.82e-41,75;UBERON:0002346,3.01e-40,64;UBERON:0003075,3.01e-40,64;UBERON:0007284,3.01e-40,64;UBERON:0000955,1.41e-35,47;UBERON:0006238,1.41e-35,47;UBERON:0004121,2.77e-35,95;UBERON:0000924,2.77e-35,95;UBERON:0006601,2.77e-35,95;UBERON:0010371,1.07e-34,73;UBERON:0002616,1.34e-34,46;UBERON:0002020,3.18e-34,34;UBERON:0003080,2.03e-30,40;UBERON:0003056,5.37e-30,49;UBERON:0002780,2.72e-29,39;UBERON:0001890,2.72e-29,39;UBERON:0006240,2.72e-29,39;UBERON:0003528,2.52e-28,29;UBERON:0002791,2.52e-28,29;UBERON:0001893,2.52e-28,29;UBERON:0010314,4.47e-24,92;UBERON:0000956,6.28e-19,21;UBERON:0001869,6.28e-19,21;UBERON:0000203,6.28e-19,21;UBERON:0002619,3.81e-15,17;UBERON:0003076,3.65e-11,12;UBERON:0003057,3.65e-11,12;UBERON:0000025,4.78e-11,114;UBERON:0002021,5.47e-11,10;UBERON:0000411,5.47e-11,10;UBERON:0001950,5.47e-11,10;UBERON:0002420,1.67e-10,8;UBERON:0007245,1.67e-10,8;UBERON:0010009,1.67e-10,8;UBERON:0010011,1.67e-10,8;UBERON:0000454,1.67e-10,8;UBERON:0004111,4.40e-10,122;UBERON:0002240,7.78e-08,6;UBERON:0005174,7.78e-08,6;UBERON:0001137,7.78e-08,6;UBERON:0001948,6.25e-07,5;UBERON:0002315,6.25e-07,5;UBERON:0000369,6.42e-07,5;UBERON:0002435,6.42e-07,5;UBERON:0000204,6.42e-07,5;UBERON:0010082,6.42e-07,5 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,2.18025156380447,1.31811709640683,2.13872888981712,0.55994568650145,1.43752564364972,0,0,0,0.514518872071894,0.85960031981627,0.515672092277442,6.67644320836673,3.70293685490423,5.07065122804943,0,0.889294796111139,0,0,0,0.599200221036809,0.768436610643109,3.62913643079672,2.8351247049655,2.10324961351382,4.85606673486466,3.3130281142742,2.9397791811589,2.1086003624012,0.919218786610021,1.10115880999389,4.72443150915195,3.37934373163736,6.06676923558892,10.2466160834699,5.2091337055676,6.14202597803038,6.19038871034848,4.27835093775068,5.59794312399969,3.70166370077668,5.21918448310842,0.151452386666368,1.058001841495,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.29688427812965,0.520455980298408,0.304465478312141,0.691846491768175,0.452167921657868,0.470354828542819,0.753999547978053,0,0.289198713839823,0,0.161766849947409,1.10420759230197,0,0,4.68449275218475,3.97948742945565,0,0,0,0,4.04434726393021,2.28750301409313,3.14135880282161,4.86708096538374,3.58001640262463,6.2336413367868,4.54275536589721,0.509196819251581,0.124406970610093,0,0.420883711772948,0.260240885925407,0.689706313300419,1.26043490863744,0.90422890701429,1.15662048557257,1.7935920839879,1.68663104207512,1.03481348295606,0.215567992932842,0.378212160335639,0.527853372491847,0.43839146485515,0,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.438599962275997,0.219550115291051,0,5.67782861123144,5.45394445610208,0,0,0.213288250535234,0,0.644337306610467,0.80673409849337,0.889512175379481,0.380451252225118,0,0,0,0,0.38992817423824,0,0.432276099749388,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0.162964976442026,0,0,0,0.476087281772027,0.390267295715598,0.472905432318573,0,0.318909537314974,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,3.21101179975584,3.04750385139728,0,0.504941854408746,0.315508219416257,1.17131623288992,0.430846795465598,0,0.445597348164788,0.566153061577665,0,0.876767573733936,0.395287777946524,2.89189184779626,0.283880170416537,0.534196811001766,0.162886959353576,0.659880491890142,0,0.971122544619926,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0.356497378384721,0,0,0,1.70219802876894,0.36012218806262,1.03486947026204,1.28602221018955,0.532020700926821,0.535106452806212,0.987294123612726,5.17590413494819,0,0,0.220528398054962,0.49465875882444,0,0.482503399425247,0,0,0,3.33765543618917,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0.432021363287205,0,0.218362563746178,0.539457385539283,0.247960367176008,0.785267825952089,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0.168956125490778,0.352071715937262,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0,0.358053391334963,0.198681354781265,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0.453460767230423,0,0.179427713218951,0.167884616364078,0.579568782096571,1.31377732815827,0.549454872801795,0,0,5.0827665835536,5.52390283808612,3.43737308063638,3.78077001156113,1.37016503954128,3.7769694869485,3.37511250115903,2.2516060161211,2.71885445390523,4.14208249401456,0.518936737920883,1.59609949360412,1.02440163452481,0.729320151204882,1.88651846365184,1.47074806760011,0.666740183404846,0.206035057238894,1.60459604795908,0.758091635291392,0.50695859978048,0.565879024158229,0.561849044819294,0.640251524048693,1.09127391015665,1.90517476513229,0.927074607558844,0.77163688185482,1.64834360321323,1.47198920134397,0.685738504770831,1.77475806159337,0.715308569841963,1.16277133305863,0.752875043322645,1.18460451048347,1.09756783723664,0.789209134313529,1.22223702461276,0.561142271657738,1.30498519936592,1.28055827088233,1.63692417267876,0.77468420592983,0.964533054905707,2.99772693525535,0.935726433781634,0.644613162144895,1.14772999241306,0.661774257358546,0.927471342481686 | |phase1_expression=1.44133962394315,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,2.18025156380447,1.31811709640683,2.13872888981712,0.55994568650145,1.43752564364972,0,0,0,0.514518872071894,0.85960031981627,0.515672092277442,6.67644320836673,3.70293685490423,5.07065122804943,0,0.889294796111139,0,0,0,0.599200221036809,0.768436610643109,3.62913643079672,2.8351247049655,2.10324961351382,4.85606673486466,3.3130281142742,2.9397791811589,2.1086003624012,0.919218786610021,1.10115880999389,4.72443150915195,3.37934373163736,6.06676923558892,10.2466160834699,5.2091337055676,6.14202597803038,6.19038871034848,4.27835093775068,5.59794312399969,3.70166370077668,5.21918448310842,0.151452386666368,1.058001841495,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.29688427812965,0.520455980298408,0.304465478312141,0.691846491768175,0.452167921657868,0.470354828542819,0.753999547978053,0,0.289198713839823,0,0.161766849947409,1.10420759230197,0,0,4.68449275218475,3.97948742945565,0,0,0,0,4.04434726393021,2.28750301409313,3.14135880282161,4.86708096538374,3.58001640262463,6.2336413367868,4.54275536589721,0.509196819251581,0.124406970610093,0,0.420883711772948,0.260240885925407,0.689706313300419,1.26043490863744,0.90422890701429,1.15662048557257,1.7935920839879,1.68663104207512,1.03481348295606,0.215567992932842,0.378212160335639,0.527853372491847,0.43839146485515,0,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.438599962275997,0.219550115291051,0,5.67782861123144,5.45394445610208,0,0,0.213288250535234,0,0.644337306610467,0.80673409849337,0.889512175379481,0.380451252225118,0,0,0,0,0.38992817423824,0,0.432276099749388,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0.162964976442026,0,0,0,0.476087281772027,0.390267295715598,0.472905432318573,0,0.318909537314974,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,3.21101179975584,3.04750385139728,0,0.504941854408746,0.315508219416257,1.17131623288992,0.430846795465598,0,0.445597348164788,0.566153061577665,0,0.876767573733936,0.395287777946524,2.89189184779626,0.283880170416537,0.534196811001766,0.162886959353576,0.659880491890142,0,0.971122544619926,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0.356497378384721,0,0,0,1.70219802876894,0.36012218806262,1.03486947026204,1.28602221018955,0.532020700926821,0.535106452806212,0.987294123612726,5.17590413494819,0,0,0.220528398054962,0.49465875882444,0,0.482503399425247,0,0,0,3.33765543618917,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0.432021363287205,0,0.218362563746178,0.539457385539283,0.247960367176008,0.785267825952089,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0.168956125490778,0.352071715937262,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0,0.358053391334963,0.198681354781265,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0.453460767230423,0,0.179427713218951,0.167884616364078,0.579568782096571,1.31377732815827,0.549454872801795,0,0,5.0827665835536,5.52390283808612,3.43737308063638,3.78077001156113,1.37016503954128,3.7769694869485,3.37511250115903,2.2516060161211,2.71885445390523,4.14208249401456,0.518936737920883,1.59609949360412,1.02440163452481,0.729320151204882,1.88651846365184,1.47074806760011,0.666740183404846,0.206035057238894,1.60459604795908,0.758091635291392,0.50695859978048,0.565879024158229,0.561849044819294,0.640251524048693,1.09127391015665,1.90517476513229,0.927074607558844,0.77163688185482,1.64834360321323,1.47198920134397,0.685738504770831,1.77475806159337,0.715308569841963,1.16277133305863,0.752875043322645,1.18460451048347,1.09756783723664,0.789209134313529,1.22223702461276,0.561142271657738,1.30498519936592,1.28055827088233,1.63692417267876,0.77468420592983,0.964533054905707,2.99772693525535,0.935726433781634,0.644613162144895,1.14772999241306,0.661774257358546,0.927471342481686 | ||
|short_description=p9@Olfm1 | |||
}} | }} |
Latest revision as of 11:50, 26 September 2015
Short description: | p9@Olfm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Olfm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -6bp_to_ENSMUST00000113920, ENSMUST00000152415_5end |
EntrezGene: | Olfm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.11e-23 | 23 |
neuroblast (sensu Vertebrata) | 4.11e-23 | 23 |
neural cell | 2.00e-16 | 43 |
neuron | 2.15e-16 | 33 |
neuronal stem cell | 2.15e-16 | 33 |
neuroblast | 2.15e-16 | 33 |
electrically signaling cell | 2.15e-16 | 33 |
ectodermal cell | 7.73e-16 | 44 |
neurectodermal cell | 7.73e-16 | 44 |
electrically responsive cell | 1.17e-12 | 39 |
electrically active cell | 1.17e-12 | 39 |
embryonic cell | 8.77e-07 | 70 |