FFCP PHASE1:Mm9::chr2:74542589..74542602,+: Difference between revisions
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|id=chr2:74542589..74542602,+
|short_description=p8@Hoxd8
|description=CAGE_peak_8_at_Hoxd8_5end
|association_with_transcript=-69bp_to_ENSMUST00000151380_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=15437 | |EntrezGene=15437 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt=F6W963 | |UniProt=F6W963 | ||
|association_with_transcript=-69bp_to_ENSMUST00000151380_5end | |||
|cluster_id=chr2:74542589..74542602,+ | |||
|description=CAGE_peak_8_at_Hoxd8_5end | |||
|id=chr2:74542589..74542602,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!3.50e-34!14;UBERON:0003918!3.50e-34!14;UBERON:0005095!3.50e-34!14;UBERON:0007687!3.50e-34!14;UBERON:0006554!1.53e-29!16;UBERON:0001008!1.25e-27!17;UBERON:0000489!8.34e-22!21;UBERON:0003103!3.65e-09!43;UBERON:0005172!1.07e-07!49;UBERON:0005173!1.07e-07!49;UBERON:0002417!1.07e-07!49;UBERON:0000916!1.07e-07!49;UBERON:0000080!5.20e-07!4;UBERON:0005904!5.20e-07!4;UBERON:0006947!5.20e-07!4;UBERON:0002120!5.20e-07!4;UBERON:0004054!5.20e-07!4;UBERON:0004875!5.20e-07!4;UBERON:0004876!5.20e-07!4;UBERON:0005721!5.20e-07!4;UBERON:0005754!5.20e-07!4;UBERON:0007297!5.20e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.64e-74,14;UBERON:0003918,3.64e-74,14;UBERON:0011143,3.64e-74,14;UBERON:0005095,3.64e-74,14;UBERON:0007687,3.64e-74,14;UBERON:0006554,1.46e-57,18;UBERON:0001008,1.68e-54,19;UBERON:0000489,2.97e-49,21;UBERON:0003103,1.09e-23,43;UBERON:0005172,1.09e-20,49;UBERON:0005173,1.09e-20,49;UBERON:0002417,1.09e-20,49;UBERON:0000916,1.09e-20,49;UBERON:0003104,1.89e-16,61;UBERON:0009142,1.89e-16,61;UBERON:0009569,3.89e-15,66;UBERON:0005177,1.72e-12,79;UBERON:0002100,7.64e-11,90;UBERON:0000998,2.06e-08,1;UBERON:0007194,2.06e-08,1;UBERON:0006868,2.06e-08,1;UBERON:0000080,5.63e-08,4;UBERON:0005904,5.63e-08,4;UBERON:0006947,5.63e-08,4;UBERON:0002120,5.63e-08,4;UBERON:0004054,5.63e-08,4;UBERON:0004875,5.63e-08,4;UBERON:0004876,5.63e-08,4;UBERON:0005721,5.63e-08,4;UBERON:0005754,5.63e-08,4;UBERON:0007297,5.63e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27601481143698,1.94222471436539,2.25415471346161,2.44381593414377,4.26695471768777,2.38461787627083,4.42655759869801,4.13308414342886,5.49495547444812,6.54004968785543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27601481143698,1.94222471436539,2.25415471346161,2.44381593414377,4.26695471768777,2.38461787627083,4.42655759869801,4.13308414342886,5.49495547444812,6.54004968785543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0 | ||
|short_description=p8@Hoxd8 | |||
}} | }} |
Latest revision as of 23:26, 26 September 2015
Short description: | p8@Hoxd8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Hoxd8_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | -69bp_to_ENSMUST00000151380_5end |
EntrezGene: | Hoxd8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 3.64e-74 | 14 |
kidney mesenchyme | 3.64e-74 | 14 |
upper urinary tract | 3.64e-74 | 14 |
kidney rudiment | 3.64e-74 | 14 |
kidney field | 3.64e-74 | 14 |
urinary system structure | 1.46e-57 | 18 |
renal system | 1.68e-54 | 19 |
cavitated compound organ | 2.97e-49 | 21 |
compound organ | 1.09e-23 | 43 |
abdomen element | 1.09e-20 | 49 |
abdominal segment element | 1.09e-20 | 49 |
abdominal segment of trunk | 1.09e-20 | 49 |
abdomen | 1.09e-20 | 49 |
mesenchyme | 1.89e-16 | 61 |
entire embryonic mesenchyme | 1.89e-16 | 61 |
subdivision of trunk | 3.89e-15 | 66 |
trunk region element | 1.72e-12 | 79 |
trunk | 7.64e-11 | 90 |
seminal vesicle | 2.06e-08 | 1 |
vesicular gland | 2.06e-08 | 1 |
seminal fluid secreting gland | 2.06e-08 | 1 |
mesonephros | 5.63e-08 | 4 |
duct of male reproductive system | 5.63e-08 | 4 |
male genital duct | 5.63e-08 | 4 |
pronephros | 5.63e-08 | 4 |
internal male genitalia | 5.63e-08 | 4 |
nephrogenic cord | 5.63e-08 | 4 |
urogenital ridge | 5.63e-08 | 4 |
pronephric mesoderm | 5.63e-08 | 4 |
rostral part of nephrogenic cord | 5.63e-08 | 4 |
presumptive pronephric mesoderm | 5.63e-08 | 4 |