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FFCP PHASE1:Mm9::chr7:151470369..151470411,+: Difference between revisions

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(Created page with "{{FFCP |id=chr7:151470369..151470411,+ |short_description=p1@Shank2 |description=CAGE_peak_1_at_Shank2_5end |association_with_transcript=25bp_to_ENSMUST00000146006_5end |...")
 
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{{FFCP
{{FFCP
|id=chr7:151470369..151470411,+
|DHSsupport=NA
|short_description=p1@Shank2
|DPIdataset=NA
|description=CAGE_peak_1_at_Shank2_5end
|association_with_transcript=25bp_to_ENSMUST00000146006_5end
|EntrezGene=210274
|EntrezGene=210274
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=25bp_to_ENSMUST00000146006_5end
|cluster_id=chr7:151470369..151470411,+
|description=CAGE_peak_1_at_Shank2_5end
|id=chr7:151470369..151470411,+
|ontology_enrichment_celltype=CL:0000117!5.36e-15!23;CL:0000337!5.36e-15!23;CL:0000540!1.14e-13!33;CL:0000047!1.14e-13!33;CL:0000031!1.14e-13!33;CL:0000404!1.14e-13!33;CL:0000393!1.40e-10!39;CL:0000211!1.40e-10!39;CL:0002319!2.21e-10!43;CL:0000221!7.72e-10!44;CL:0000133!7.72e-10!44;CL:0000055!6.66e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.33e-25,23;CL:0000337,3.33e-25,23;CL:0000540,3.03e-18,33;CL:0000047,3.03e-18,33;CL:0000031,3.03e-18,33;CL:0000404,3.03e-18,33;CL:0000393,2.73e-14,39;CL:0000211,2.73e-14,39;CL:0002319,2.73e-12,43;CL:0000221,7.55e-12,44;CL:0000133,7.55e-12,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.08e-33!71;UBERON:0003075!1.08e-33!71;UBERON:0007284!1.08e-33!71;UBERON:0004121!8.66e-30!102;UBERON:0000924!8.66e-30!102;UBERON:0006601!8.66e-30!102;UBERON:0001017!2.60e-29!73;UBERON:0005743!2.60e-29!73;UBERON:0000073!3.80e-29!75;UBERON:0001016!3.80e-29!75;UBERON:0000033!1.09e-26!63;UBERON:0001049!4.62e-26!52;UBERON:0005068!4.62e-26!52;UBERON:0006241!4.62e-26!52;UBERON:0007135!4.62e-26!52;UBERON:0003056!1.31e-25!49;UBERON:0000955!8.34e-25!50;UBERON:0006238!8.34e-25!50;UBERON:0002616!5.07e-24!49;UBERON:0003080!1.78e-21!40;UBERON:0002020!2.31e-21!34;UBERON:0002780!9.59e-21!39;UBERON:0001890!9.59e-21!39;UBERON:0006240!9.59e-21!39;UBERON:0002791!7.11e-18!29;UBERON:0003528!7.11e-18!29;UBERON:0001893!7.11e-18!29;UBERON:0007811!6.64e-14!86;UBERON:0000153!4.49e-13!94;UBERON:0000956!8.23e-13!21;UBERON:0001869!8.23e-13!21;UBERON:0000203!8.23e-13!21;UBERON:0002619!1.24e-10!17;UBERON:0002021!2.46e-09!10;UBERON:0000411!2.46e-09!10;UBERON:0001950!2.46e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.15e-41,64;UBERON:0003075,1.15e-41,64;UBERON:0007284,1.15e-41,64;UBERON:0000073,1.90e-40,54;UBERON:0001017,4.93e-38,73;UBERON:0001049,1.13e-37,52;UBERON:0005068,1.13e-37,52;UBERON:0006241,1.13e-37,52;UBERON:0007135,1.13e-37,52;UBERON:0001016,1.30e-36,75;UBERON:0002020,6.93e-36,34;UBERON:0004121,2.24e-35,95;UBERON:0000924,2.24e-35,95;UBERON:0006601,2.24e-35,95;UBERON:0010371,1.07e-34,73;UBERON:0003056,4.37e-33,49;UBERON:0000955,8.46e-32,47;UBERON:0006238,8.46e-32,47;UBERON:0002616,1.62e-30,46;UBERON:0003528,9.86e-30,29;UBERON:0002791,9.86e-30,29;UBERON:0001893,9.86e-30,29;UBERON:0003080,1.68e-28,40;UBERON:0002780,2.76e-27,39;UBERON:0001890,2.76e-27,39;UBERON:0006240,2.76e-27,39;UBERON:0010314,1.68e-24,92;UBERON:0000956,8.15e-21,21;UBERON:0001869,8.15e-21,21;UBERON:0000203,8.15e-21,21;UBERON:0002619,5.57e-17,17;UBERON:0002021,3.12e-15,10;UBERON:0000411,3.12e-15,10;UBERON:0001950,3.12e-15,10;UBERON:0000025,2.29e-10,114;UBERON:0002420,6.75e-10,8;UBERON:0007245,6.75e-10,8;UBERON:0010009,6.75e-10,8;UBERON:0010011,6.75e-10,8;UBERON:0000454,6.75e-10,8;UBERON:0003076,3.36e-09,12;UBERON:0003057,3.36e-09,12;UBERON:0004111,6.19e-09,122;UBERON:0002240,4.50e-08,6;UBERON:0005174,4.50e-08,6;UBERON:0001137,4.50e-08,6;UBERON:0000369,3.53e-07,5;UBERON:0002435,3.53e-07,5;UBERON:0000204,3.53e-07,5;UBERON:0010082,3.53e-07,5;UBERON:0001948,3.75e-07,5;UBERON:0002315,3.75e-07,5
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,4.65327859977075,4.23192783417626,8.23980824558033,0,0,0,0,0,0,0.384218305321555,1.45165457231869,2.43010688997043,1.68259969081106,6.85562362569129,4.19650227808066,1.95985278743926,2.49198224647415,2.75765635983006,6.60695285996332,5.74593021383345,5.06901559745603,4.2203612073662,5.30628332893976,4.68822033501084,2.23346399201105,2.25105044012672,4.73674568108111,6.77645746589436,4.9830088279686,5.03278503728312,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.890652834388949,0.867426633830679,0.913396434936424,0.922461989024234,0.904335843315735,0.587943535678524,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0,0,2.04946557908083,2.51336048176146,0,0,0,0,5.84183493678809,27.9075367719362,4.90051973240171,32.8527965163402,29.407277592988,7.89594569326328,12.8170597823529,0.101839363850316,0,0,0.210441855886474,1.04096354370163,0.919608417733892,2.34080768746954,1.35634336052144,2.31324097114515,3.45907044769094,1.49922759295566,3.3631438196072,0,0,0.703804496655795,0.43839146485515,0.278047249225598,0,0,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,32.3846520788756,1.64647379806855,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0.494096864172033,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,2.93029216480508,0,0.252470927204373,0.631016438832513,0.390438744296638,1.07711698866399,0.477937595905104,0.445597348164788,0,0,1.16902343164525,0,8.03303291054518,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,2.38307724027652,1.08036656418786,0.388076051348264,0.214337035031592,0.354680467284547,0.178368817602071,0.658196082408484,0.913394847343798,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,2.59595422814714,0,0,0.185194527369712,0,0,0,0,0,0,0,0.632671987162271,0,0.216010681643603,0,0.436725127492355,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,23.1548255472997,19.7939851698086,20.0513429703789,14.9512268639008,26.0331357512844,37.0143009720953,33.7511250115903,34.2244114450408,35.7982503097522,37.7965027578829,0.830298780673413,1.99512436700516,1.02440163452481,1.21553358534147,0.419226325255965,0.183843508450014,0.666740183404846,0.618105171716683,0.64183841918363,1.51618327058278,1.52087579934144,0.565879024158229,0.749132059759059,0.448176066834085,0.976402972245426,1.90517476513229,1.0429589335037,0.192909220463705,0.412085900803307,1.47198920134397,0.685738504770831,0.532427418478012,0.476872379894642,1.0174249164263,1.03520318456864,1.01537529470012,0.548783918618318,0.526139422875686,0.407412341537585,2.24456908663095,0.474540072496697,0.689531376628944,0,0.464810523557898,0.578719832943424,4.49659040288303,0.467863216890817,0.214871054048298,1.14772999241306,0,0
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,4.65327859977075,4.23192783417626,8.23980824558033,0,0,0,0,0,0,0.384218305321555,1.45165457231869,2.43010688997043,1.68259969081106,6.85562362569129,4.19650227808066,1.95985278743926,2.49198224647415,2.75765635983006,6.60695285996332,5.74593021383345,5.06901559745603,4.2203612073662,5.30628332893976,4.68822033501084,2.23346399201105,2.25105044012672,4.73674568108111,6.77645746589436,4.9830088279686,5.03278503728312,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.890652834388949,0.867426633830679,0.913396434936424,0.922461989024234,0.904335843315735,0.587943535678524,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0,0,2.04946557908083,2.51336048176146,0,0,0,0,5.84183493678809,27.9075367719362,4.90051973240171,32.8527965163402,29.407277592988,7.89594569326328,12.8170597823529,0.101839363850316,0,0,0.210441855886474,1.04096354370163,0.919608417733892,2.34080768746954,1.35634336052144,2.31324097114515,3.45907044769094,1.49922759295566,3.3631438196072,0,0,0.703804496655795,0.43839146485515,0.278047249225598,0,0,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,32.3846520788756,1.64647379806855,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0.494096864172033,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,2.93029216480508,0,0.252470927204373,0.631016438832513,0.390438744296638,1.07711698866399,0.477937595905104,0.445597348164788,0,0,1.16902343164525,0,8.03303291054518,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,2.38307724027652,1.08036656418786,0.388076051348264,0.214337035031592,0.354680467284547,0.178368817602071,0.658196082408484,0.913394847343798,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,2.59595422814714,0,0,0.185194527369712,0,0,0,0,0,0,0,0.632671987162271,0,0.216010681643603,0,0.436725127492355,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,23.1548255472997,19.7939851698086,20.0513429703789,14.9512268639008,26.0331357512844,37.0143009720953,33.7511250115903,34.2244114450408,35.7982503097522,37.7965027578829,0.830298780673413,1.99512436700516,1.02440163452481,1.21553358534147,0.419226325255965,0.183843508450014,0.666740183404846,0.618105171716683,0.64183841918363,1.51618327058278,1.52087579934144,0.565879024158229,0.749132059759059,0.448176066834085,0.976402972245426,1.90517476513229,1.0429589335037,0.192909220463705,0.412085900803307,1.47198920134397,0.685738504770831,0.532427418478012,0.476872379894642,1.0174249164263,1.03520318456864,1.01537529470012,0.548783918618318,0.526139422875686,0.407412341537585,2.24456908663095,0.474540072496697,0.689531376628944,0,0.464810523557898,0.578719832943424,4.49659040288303,0.467863216890817,0.214871054048298,1.14772999241306,0,0
|short_description=p1@Shank2
}}
}}

Latest revision as of 06:24, 26 September 2015

Short description:p1@Shank2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Shank2_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 25bp_to_ENSMUST00000146006_5end
EntrezGene:Shank2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Shank2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.31
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.03
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.84
corpus striatum, adult.CNhs10487.19-21D827.91
corpus striatum, neonate N00.CNhs11226.630-43F14.90
cortex, adult.CNhs10473.12-14D532.85
cortex, neonate N30.CNhs11107.1392-42F229.41
diencephalon, adult.CNhs10482.20-12F27.90
diencephalon, neonate N30.CNhs11201.1388-42B212.82
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E832.38
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.15
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.79
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A537.01
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A734.22
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A835.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A937.80
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.33e-2523
neuroblast (sensu Vertebrata)3.33e-2523
neuron3.03e-1833
neuronal stem cell3.03e-1833
neuroblast3.03e-1833
electrically signaling cell3.03e-1833
electrically responsive cell2.73e-1439
electrically active cell2.73e-1439
neural cell2.73e-1243
ectodermal cell7.55e-1244
neurectodermal cell7.55e-1244

Uber anatomy
Ontology termp-valuen
neurectoderm1.15e-4164
neural plate1.15e-4164
presumptive neural plate1.15e-4164
regional part of nervous system1.90e-4054
central nervous system4.93e-3873
neural tube1.13e-3752
neural rod1.13e-3752
future spinal cord1.13e-3752
neural keel1.13e-3752
nervous system1.30e-3675
gray matter6.93e-3634
ectoderm-derived structure2.24e-3595
ectoderm2.24e-3595
presumptive ectoderm2.24e-3595
ecto-epithelium1.07e-3473
pre-chordal neural plate4.37e-3349
brain8.46e-3247
future brain8.46e-3247
regional part of brain1.62e-3046
brain grey matter9.86e-3029
regional part of telencephalon9.86e-3029
telencephalon9.86e-3029
anterior neural tube1.68e-2840
regional part of forebrain2.76e-2739
forebrain2.76e-2739
future forebrain2.76e-2739
structure with developmental contribution from neural crest1.68e-2492
cerebral cortex8.15e-2121
cerebral hemisphere8.15e-2121
pallium8.15e-2121
regional part of cerebral cortex5.57e-1717
occipital lobe3.12e-1510
visual cortex3.12e-1510
neocortex3.12e-1510
tube2.29e-10114
basal ganglion6.75e-108
nuclear complex of neuraxis6.75e-108
aggregate regional part of brain6.75e-108
collection of basal ganglia6.75e-108
cerebral subcortex6.75e-108
posterior neural tube3.36e-0912
chordal neural plate3.36e-0912
anatomical conduit6.19e-09122
spinal cord4.50e-086
dorsal region element4.50e-086
dorsum4.50e-086
corpus striatum3.53e-075
striatum3.53e-075
ventral part of telencephalon3.53e-075
future corpus striatum3.53e-075
regional part of spinal cord3.75e-075
gray matter of spinal cord3.75e-075
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