FF:11775-124A2: Difference between revisions
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00004730 | ||
| | |accession_numbers=CAGE;DRX008800;DRR009672;DRZ001097;DRZ002482;DRZ012447;DRZ013832 | ||
| | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002371,UBERON:0001474,UBERON:0000479,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0004765,UBERON:0010317,UBERON:0002204,UBERON:0001434,UBERON:0002390,UBERON:0002193,UBERON:0002405 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000255,CL:0000556 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
| | |ancestors_in_ff_facet=FF:0000102,FF:0000002,FF:0000101,FF:0000103,FF:0000001,FF:0000343,FF:0011468 | ||
|comment= | |||
|created_by= | |||
|creation_date= | |||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |||
|expression_enrichment_score=chr7:51787434..51787448,-!p1@Spib!2.37!328.71!Spib;;chr9:51021788..51021802,+!p1@Pou2af1!2.36!268.14!Pou2af1;;chr4:44723559..44723593,-!p1@Pax5!2.24!173.03!Pax5;;chr6:99216488..99216534,-!p2@Foxp1!2.17!395.12!Foxp1;;chr1:38721792..38721845,-!p1@Aff3!2.16!176.50!Aff3;;chr4:44723520..44723544,-!p2@Pax5!2.05!110.25!Pax5;;chr11:98407264..98407295,-!p1@Ikzf3!2.04!108.68!Ikzf3;;chr13:30841099..30841116,+!p1@Irf4!2.03!164.51!Irf4;;chr11:98407234..98407259,-!p2@Ikzf3!1.91!79.81!Ikzf3;;chr4:44723633..44723646,-!p3@Pax5!1.85!69.72!Pax5;;chr11:11586218..11586285,+!p1@Ikzf1!1.79!186.91!Ikzf1;;chr16:55966492..55966517,+!p2@Rpl24,p2@Zbtb11!1.77!73.66!Zbtb11;;chr1:87497610..87497645,+!p1@Gm2427,p1@Sp140!1.74!54.26!Sp140;;chr8:87225329..87225396,+!p1@Lyl1!1.63!149.37!Lyl1;;chr11:98407370..98407395,-!p3@Ikzf3!1.55!34.23!Ikzf3;;chr1:52176406..52176433,+!p2@Stat1!1.54!80.60!Stat1;;chr16:92826249..92826325,-!p1@Runx1!1.53!79.34!Runx1;;chr8:123260252..123260264,+!p1@Irf8!1.52!218.46!Irf8;;chr4:44723835..44723849,-!p4@Pax5!1.52!32.33!Pax5;;chr1:52065508..52065522,+!p2@Stat4!1.50!35.80!Stat4;;chr7:31206743..31206761,+!p1@Nfkbid!1.47!38.33!Nfkbid;;chr1:87497247..87497279,+!p2@Gm2427,p2@Sp140!1.46!27.76!Sp140;;chr14:79915425..79915501,+!p1@Elf1!1.45!232.97!Elf1;;chr7:25917492..25917512,-!p1@Pou2f2!1.44!44.64!Pou2f2;;chr1:87546583..87546595,+!p1@Sp100!1.40!34.07!Sp100;;chr4:124805061..124805087,-!p1@Zc3h12a!1.38!69.24!Zc3h12a;;chr6:29476690..29476724,+!p1@Irf5!1.37!100.16!Irf5;;chr4:63064364..63064384,-!p1@Akna!1.37!63.57!Akna;;chr2:173044380..173044432,-!p1@Zbp1!1.37!52.05!Zbp1;;chr7:20162663..20162678,+!p1@Zfp296!1.36!28.55!Zfp296;;chr17:45692676..45692695,+!p2@Nfkbie!1.34!41.96!Nfkbie;;chr8:47825203..47825225,+!p3@Irf2!1.34!27.60!Irf2;;chr10:88145766..88145770,-!p1@Spic!1.34!27.29!Spic;;chr13:83663902..83663927,+!p1@Mef2c!1.33!470.51!Mef2c;;chr1:52065454..52065495,+!p1@Stat4!1.33!32.97!Stat4;;chr11:44430812..44430838,+!p1@Ebf1!1.32!188.80!Ebf1;;chr3:130815703..130815721,+!p2@Lef1!1.32!24.13!Lef1;;chr4:134708451..134708469,+!p1@Runx3!1.31!33.60!Runx3;;chr11:11585678..11585745,+!p5@Ikzf1!1.30!27.29!Ikzf1;;chr9:32348943..32349001,-!p1@Fli1!1.28!143.22!Fli1;;chr11:98407340..98407359,-!p4@Ikzf3!1.28!18.14!Ikzf3;;chr1:52065530..52065548,+!p3@Stat4!1.28!17.98!Stat4;;chr9:32503590..32503680,+!p1@Ets1!1.27!618.31!Ets1;;chr11:23670953..23671028,-!p1@Rel!1.27!97.00!Rel;;chr2:90936901..90936945,+!p1@Sfpi1!1.26!88.64!Sfpi1;;chr4:32325688..32325777,+!p1@Bach2!1.25!145.59!Bach2;;chr1:87546602..87546617,+!p2@Sp100!1.24!19.24!Sp100;;chr17:51971932..51971958,-!p2@Satb1!1.23!21.77!Satb1;;chr11:23977565..23977612,+!p5@Bcl11a!1.21!32.65!Bcl11a;;chr1:38721767..38721778,-!p5@Aff3!1.21!15.30!Aff3;;chr11:16908650..16908690,-!p1@Plek!1.20!89.28!Plek;;chr11:100683839..100683890,-!p2@Stat5b!1.20!34.86!Stat5b;;chr6:29479277..29479296,+!p2@Irf5!1.20!14.83!Irf5;;chr17:45692642..45692663,+!p1@Nfkbie!1.19!46.37!Nfkbie;;chr1:52176378..52176401,+!p3@Stat1!1.18!42.59!Stat1;;chr8:47825166..47825178,+!p2@Irf2!1.18!21.77!Irf2;;chr11:98407305..98407321,-!p6@Ikzf3!1.18!14.04!Ikzf3;;chr8:108583550..108583595,+!p2@Nfatc3!1.17!61.83!Nfatc3;;chrX:137077716..137077734,-!p1@Tsc22d3!1.16!94.80!Tsc22d3;;chr19:37509324..37509337,+!p1@Hhex!1.16!94.01!Hhex;;chr4:44717334..44717367,-!p5@Pax5!1.16!13.56!Pax5;;chr4:134708909..134708939,+!p3@Runx3!1.16!13.56!Runx3;;chr1:167865149..167865167,-!p3@Pou2f1!1.16!13.41!Pou2f1;;chr11:44430788..44430804,+!p3@Ebf1!1.14!31.86!Ebf1;;chr19:46379199..46379301,+!p1@Nfkb2!1.13!70.98!Nfkb2;;chr11:11584970..11585030,+!p2@Ikzf1!1.13!17.98!Ikzf1;;chr11:11585912..11585950,+!p6@Ikzf1!1.13!15.93!Ikzf1;;chr4:44717308..44717321,-!p6@Pax5!1.13!12.46!Pax5;;chr8:74842952..74842970,+!p1@Klf2!1.11!793.23!Klf2;;chr11:44431369..44431389,+!p8@Ebf1!1.09!14.67!Ebf1;;chr7:19895384..19895399,-!p2@Fosb!1.08!15.77!Fosb;;chr2:90936886..90936898,+!p5@Sfpi1!1.08!13.25!Sfpi1;;chr18:80909801..80909819,-!p1@Nfatc1!1.06!63.09!Nfatc1;;chr11:98407142..98407159,-!p5@Ikzf3!1.05!10.25!Ikzf3;;chr13:83663868..83663894,+!p2@Mef2c!1.03!142.12!Mef2c;;chr5:92391466..92391471,+!p2@Thap6!1.03!14.35!Thap6;;chr11:53583544..53583559,+!p1@Irf1!1.02!159.47!Irf1;;chr14:79915502..79915514,+!p4@Elf1!1.02!14.51!Elf1;;chr2:173044357..173044377,-!p2@Zbp1!1.02!13.88!Zbp1;;chr11:11590140..11590187,+!p3@Ikzf1!1.02!11.36!Ikzf1;;chr18:80904854..80904919,-!p2@Nfatc1!1.01!112.62!Nfatc1;;chr12:85534957..85535017,-!p2@C130039O16Rik!1.01!47.16!C130039O16Rik;;chr17:51971960..51971979,-!p1@Satb1!1.01!12.46!Satb1;;chr11:11590117..11590138,+!p4@Ikzf1!1.01!9.15!Ikzf1;;chr1:133904901..133904934,+!p3@Elk4!1.00!26.97!Elk4;;chr17:46520518..46520571,+!p2@Zfp318!0.99!19.40!Zfp318;;chr11:52096066..52096081,-!p2@Tcf7!0.99!10.73!Tcf7;;chr1:38721779..38721790,-!p6@Aff3!0.99!8.83!Aff3;;chr1:87497443..87497454,+!p3@Gm2427,p3@Sp140!0.98!8.52!Sp140;;chr17:51972530..51972571,-!p7@Satb1!0.98!8.52!Satb1;;chr11:23978078..23978096,+!p4@Bcl11a!0.97!25.71!Bcl11a;;chr4:32325445..32325468,+!p4@Bach2!0.97!11.99!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0.33!11.99!Zbtb37;;chr7:24919204..24919231,+!p2@Zfp235!0.33!10.09!Zfp235;;chr13:37917925..37917950,+!p4@Rreb1!0.33!6.94!Rreb1;;chr9:21420610..21420621,+!p5@Smarca4!0.33!5.36!Smarca4;;chrX:91368698..91368751,-!p2@Zfx!0.33!5.21!Zfx;;chr8:108160826..108160879,+!p3@Ctcf!0.33!5.05!Ctcf;;chr18:79306029..79306059,-!p2@Setbp1!0.33!3.47!Setbp1;;chr17:84586544..84586592,-!p3@Zfp36l2!0.33!1.89!Zfp36l2;;chr9:44689360..44689406,-!p1@Mll1!0.32!70.82!Mll1;;chr7:97591284..97591375,+!p1@Crebzf!0.32!61.83!Crebzf;;chr10:67741461..67741483,-!p1@Arid5b!0.32!50.95!Arid5b;;chr7:30553587..30553661,+!p1@Zfp84!0.32!45.11!Zfp84;;chr8:74474953..74475029,+!p1@Zfp961!0.32!30.44!Zfp961;;chr12:110031156..110031198,+!p2@Yy1!0.32!26.50!Yy1;;chr8:114167393..114167440,+!p1@Zfp1!0.32!21.77!Zfp1;;chr3:95021853..95021911,-!p1@Gabpb2!0.32!13.88!Gabpb2;;chr5:140267476..140267493,+!p1@Mafk!0.32!10.09!Mafk;;chr8:125778131..125778178,+!p1@Zfp276!0.32!8.04!Zfp276;;chr7:25101609..25101678,-!p1@Zfp94!0.32!6.31!Zfp94;;chr12:119539902..119539931,-!p2@Sp4!0.32!6.31!Sp4;;chr18:69505414..69505465,+!p6@Tcf4!0.32!6.31!Tcf4;;chr10:127080141..127080160,+!p2@Stat6!0.32!4.42!Stat6;;chr8:72663049..72663061,-!p4@LOC100048268,p4@Rfxank!0.32!2.68!Rfxank;;chr15:103085802..103085817,-!p4@Nfe2!0.32!1.58!Nfe2;;chr17:51965903..51965926,-!p5@Satb1!0.32!1.10!Satb1;;chr17:51972017..51972022,-!p17@Satb1!0.32!1.10!Satb1;;chr17:51952856..51952876,-!p12@Satb1!0.32!1.10!Satb1;;chr17:71201572..71201601,-!p10@Tgif1!0.32!1.10!Tgif1;;chr19:37511197..37511206,+!p3@Hhex!0.32!1.10!Hhex;;chr3:89191004..89191022,-!p4@Zbtb7b!0.32!1.10!Zbtb7b;;chr2:91077026..91077029,-!p5@Ddb2!0.32!1.10!Ddb2;;chr8:73222425..73222444,+!p2@Jund!0.32!1.10!Jund;;chr18:70727922..70728052,+!p1@Mbd2!0.31!66.56!Mbd2;;chr17:4995902..4995959,+!p1@Arid1b!0.31!42.75!Arid1b;;chr6:122769906..122769956,+!p1@Foxj2!0.31!30.13!Foxj2;;chr13:48608763..48608821,-!p1@Zfp169!0.31!28.39!Hkr1;;chr19:8876976..8877011,+!p1@Zbtb3!0.31!5.52!Zbtb3;;chr9:19426741..19426775,+!p2@Zfp317!0.31!5.21!Zfp317;;chr7:88138585..88138600,+!p2@Zfp592!0.31!4.57!Zfp592;;chr5:138187181..138187192,+!p5@Tsc22d4!0.31!4.10!Tsc22d4;;chr18:75527210..75527215,+!p4@Smad7!0.31!2.37!Smad7;;chr17:21626041..21626052,+!p3@Zfp53!0.31!1.58!Zfp53;;chrX:137077636..137077647,-!p7@Tsc22d3!0.31!1.42!Tsc22d3;;chr2:90922519..90922544,+!p6@Sfpi1!0.31!1.26!Sfpi1;;chr13:67654035..67654112,-!p1@Zfp748!0.30!26.03!Zfp748;;chr16:42907676..42907797,+!p1@Zbtb20!0.30!22.71!Zbtb20;;chrX:131543731..131543764,-!p1@Zmat1!0.30!12.62!Zmat1;;chr5:104183219..104183236,+!p2@Aff1!0.30!11.83!Aff1;;chr8:107694661..107694713,+!p2@Cbfb!0.30!11.36!Cbfb;;chr17:21587325..21587361,+!p1@Zfp51!0.30!10.25!Zfp51;;chr7:50834947..50835010,+!p2@Zfp719!0.30!8.99!Zfp719;;chr2:92886297..92886329,-!p1@Prdm11!0.30!7.73!Prdm11;;chr13:67914714..67914768,+!p1@Zfp273!0.30!5.21!Zfp273;;chr7:16986617..16986632,+!p2@Zc3h4!0.30!4.42!Zc3h4;;chr6:124959131..124959160,+!p4@Zfp384!0.30!4.26!Zfp384;;chr15:76181718..76181729,+!p3@Maf1!0.30!3.63!Maf1;;chr5:65203599..65203617,+!p8@Klf3!0.30!2.21!Klf3;;chr5:92391948..92391968,+!p3@Thap6!0.30!2.05!Thap6;;chr15:103085660..103085681,-!p1@Nfe2!0.30!1.89!Nfe2;;chr10:44178493..44178520,-!p3@Prdm1!0.30!1.74!Prdm1;;chr12:109241728..109241781,-!p2@Bcl11b!0.30!1.10!Bcl11b;;chr17:79336371..79336414,-!p1@Cebpz!0.29!84.70!Cebpz;;chr18:75527009..75527027,+!p1@Smad7!0.29!36.44!Smad7;;chr2:17986191..17986271,+!p1@Mllt10!0.29!30.28!Mllt10;;chr2:28915759..28915807,+!p1@Ttf1!0.29!24.13!Ttf1;;chr4:116480137..116480178,-!p1@Toe1!0.29!18.61!Toe1;;chr18:55152206..55152251,-!p1@Zfp608!0.29!16.56!Zfp608;;chr11:65620712..65620729,+!p1@Zkscan6!0.29!14.04!Zkscan6;;chr17:88840082..88840127,+!p1@Foxn2!0.29!11.99!Foxn2;;chr1:64168830..64168895,-!p2@Klf7!0.29!11.04!Klf7;;chr1:64579555..64579570,+!p3@Creb1!0.29!7.73!Creb1;;chr2:48805044..48805063,+!p3@Mbd5!0.29!6.94!Mbd5;;chr9:21875812..21875860,-!p1@Zfp653!0.29!4.26!Zfp653;;chr1:172797864..172797873,-!p2@Atf6!0.29!4.10!Atf6;;chr6:47827570..47827593,+!p3@Zfp282!0.29!4.10!Zfp282;;chr5:65194709..65194716,+!p10@Klf3!0.29!2.68!Klf3;;chr10:44178474..44178487,-!p4@Prdm1!0.29!1.74!Prdm1;;chr11:23670799..23670808,-!p7@Rel!0.29!0.95!Rel;;chr11:11585545..11585556,+!p10@Ikzf1!0.29!0.95!Ikzf1;;chr7:31377960..31377973,-!p3@Zbtb32!0.29!0.95!Zbtb32;;chr19:46380374..46380397,+!p7@Nfkb2!0.29!0.95!Nfkb2;;chr19:12871064..12871095,-!p2@Zfp91!0.29!0.95!Zfp91;;chr3:89191054..89191070,-!p5@Zbtb7b!0.29!0.95!Zbtb7b;;chr3:135257325..135257364,-!p11@Nfkb1!0.29!0.95!Nfkb1;;chr5:108155007..108155034,-!p1@Gfi1!0.29!0.95!Gfi1;;chr1:64579184..64579194,+!p7@Creb1!0.29!0.95!Creb1;;chr2:168415791..168415802,-!p5@Nfatc2!0.29!0.95!Nfatc2;;chr11:69393894..69393921,+!p1@Trp53!0.28!158.05!Trp53;;chr12:81213989..81214006,-!p1@Zfp36l1!0.28!87.70!Zfp36l1;;chr5:9161692..9161762,-!p1@Dmtf1!0.28!75.55!Dmtf1;;chr5:21290933..21291050,-!p1@Dnajc2!0.28!64.51!Dnajc2;;chr1:182499044..182499091,+!p1@Parp1!0.28!56.47!Parp1;;chr6:28211907..28211943,-!p1@Zfp800!0.28!49.53!Zfp800;;chr6:120314112..120314181,+!p1@Kdm5a!0.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bp!0.16!10.41!Dbp;;chr2:126501197..126501245,-!p1@Gabpb1!0.16!9.31!Gabpb1;;chr10:20032330..20032345,+!p3@Bclaf1!0.16!5.52!Bclaf1;;chr7:135020060..135020124,-!p2@Zfp668!0.16!4.89!Zfp668;;chr3:51081199..51081228,-!p3@Elf2!0.16!3.94!Elf2;;chr1:133904217..133904250,+!p5@Elk4!0.16!3.47!Elk4;;chr6:124959016..124959061,+!p3@Zfp384!0.16!2.68!Zfp384;;chr5:110539286..110539317,+!p2@Zfp605!0.16!2.37!Zfp605;;chr18:36441119..36441158,+!p2@Pura!0.16!2.37!Pura;;chr13:44826650..44826661,+!p8@Jarid2!0.16!1.42!Jarid2;;chr11:100800641..100800669,-!p3@Stat3!0.16!1.42!Stat3;;chr18:69505476..69505494,+!p15@Tcf4!0.16!1.26!Tcf4;;chr4:114581524..114581551,-!p1@Foxd2!0.16!1.10!Foxd2;;chr18:55149778..55149798,-!p11@Zfp608!0.16!0.95!Zfp608;;chr1:36364572..36364580,+!p2@Arid5a!0.16!0.63!Arid5a;;chr7:51809271..51809325,-!p1@Nr1h2!0.15!71.29!Nr1h2;;chr15:36937137..36937157,-!p2@Gm10193,p2@Zfp706!0.15!38.33!Zfp706;;chr3:30993974..30994045,+!p1@Skil!0.15!34.86!Skil;;chr15:57907747..57907798,-!p1@9130401M01Rik,p1@Zhx1!0.15!33.28!Zhx1;;chr14:52899256..52899305,+!p1@Tox4!0.15!32.49!Tox4;;chr11:100948597..100948637,+!p1@Mlx!0.15!30.13!Mlx;;chr11:60034052..60034134,-!p2@Srebf1!0.15!29.50!Srebf1;;chr14:47896467..47896523,-!p1@Wdhd1!0.15!14.83!Wdhd1;;chr9:56266431..56266488,+!p2@Hmg20a!0.15!12.46!Hmg20a;;chr15:50721588..50721610,-!p1@Trps1!0.15!12.15!Trps1;;chr11:58717675..58717719,-!p1@Zfp39!0.15!8.36!Zfp39;;chr13:67825201..67825277,-!p1@Zfp71-rs1!0.15!5.52!Zfp71-rs1;;chr13:67370029..67370067,-!p1@Zfp458!0.15!4.73!Zfp458;;chr15:75799717..75799742,+!p1@Zfp707!0.15!4.26!Zfp707;;chr2:168781029..168781093,-!p2@LOC100502777,p2@Zfp64!0.15!3.63!Zfp64;;chr7:28764153..28764173,-!p2@Zfp780b!0.15!3.63!Zfp780b;;chr2:166888058..166888105,-!p2@Znfx1!0.15!3.31!Znfx1;;chr16:3744162..3744180,+!p2@Zfp263!0.15!2.68!Zfp263;;chr7:135020412..135020433,+!p2@Zfp646!0.15!2.37!Zfp646;;chr8:107694568..107694586,+!p5@Cbfb!0.15!1.74!Cbfb;;chr8:72356384..72356434,+!p2@Pbx4!0.15!1.10!Pbx4;;chr12:85534895..85534915,-!p8@C130039O16Rik!0.15!1.10!C130039O16Rik;;chr7:52963269..52963305,+!p4@Dbp!0.15!0.95!Dbp;;chr7:87171081..87171101,+!p6@Zfp710!0.15!0.95!Zfp710;;chr4:48057987..48057996,+!p7@Nr4a3!0.15!0.63!Nr4a3;;chr15:102301149..102301221,+!p2@Pcbp2!0.14!45.27!Pcbp2;;chr12:32635078..32635111,-!p1@Hbp1!0.14!25.71!Hbp1;;chr1:93309740..93309811,-!p1@Hes6!0.14!24.45!Hes6;;chr2:166888107..166888224,-!p1@Znfx1!0.14!17.51!Znfx1;;chr7:24866907..24866967,+!p1@LOC676710,p1@Zfp180!0.14!15.62!Zfp180;;chr15:75672337..75672362,-!p1@Zc3h3!0.14!13.56!Zc3h3;;chr5:31754831..31754876,+!p1@Zfp512!0.14!8.52!Zfp512;;chr3:94641624..94641645,+!p2@Pogz!0.14!7.89!Pogz;;chr8:109620276..109620306,-!p2@Terf2!0.14!6.47!Terf2;;chr12:112088483..112088512,+!p1@Zfp839!0.14!6.47!Zfp839;;chr11:69579472..69579529,+!p1@Zbtb4!0.14!5.52!Zbtb4;;chr5:139060892..139060911,-!p2@Zfp68!0.14!5.36!Zfp68;;chr2:164737060..164737083,-!p1@Zfp335!0.14!5.21!Zfp335;;chr7:6124098..6124133,+!p1@Zfp444!0.14!4.89!Zfp444;;chr8:4613182..4613207,+!p2@Zfp958!0.14!4.26!Zfp958;;chr3:94641302..94641341,+!p3@Pogz!0.14!4.26!Pogz;;chr15:99532528..99532550,+!p3@Smarcd1!0.14!3.63!Smarcd1;;chr17:69732364..69732405,+!p2@Zfp161!0.14!3.63!Zfp161;;chr2:165818108..165818119,+!p2@Ncoa3!0.14!2.37!Ncoa3;;chr2:31428187..31428198,+!p3@Fubp3!0.14!1.74!Fubp3;;chr17:51951634..51951651,-!p6@Satb1!0.14!1.58!Satb1;;chr6:47785727..47785738,+!p6@Zfp398!0.14!0.95!Zfp398;;chr17:44873258..44873281,-!p5@Runx2!0.14!0.79!Runx2;;chr11:80196811..80196838,+!p1@Zfp207!0.13!215.30!Zfp207;;chr11:95171500..95171527,-!p1@Myst2!0.13!73.82!Myst2;;chr5:147760216..147760292,+!p1@Gtf3a!0.13!54.89!Gtf3a;;chr12:41172341..41172385,-!p1@Zfp277!0.13!41.17!Zfp277;;chr5:108697948..108697999,+!p1@Dr1!0.13!37.70!Dr1;;chr14:57397138..57397189,-!p1@Pspc1!0.13!37.38!Pspc1;;chr12:117285924..117286018,+!p1@Zfp386!0.13!34.54!Zfp386;;chr13:23461025..23461086,-!p1@Zfp322a!0.13!28.08!Zfp322a;;chr1:13364108..13364150,-!p1@Ncoa2!0.13!26.03!Ncoa2;;chr1:72629819..72629856,+!p1@Smarcal1!0.13!22.40!Smarcal1;;chr6:124959279..124959335,+!p1@Zfp384!0.13!11.20!Zfp384;;chr6:86619104..86619119,-!p1@Mxd1!0.13!9.31!Mxd1;;chr13:67601387..67601448,-!p2@Zfp58!0.13!9.31!Zfp58;;chr13:65380118..65380146,+!p2@Zfp369!0.13!7.57!Zfp369;;chr17:45570660..45570694,-!p1@Cdc5l!0.13!7.57!Cdc5l;;chr9:96620228..96620308,-!p3@Zbtb38!0.13!5.05!Zbtb38;; | |||
|ffid_belonging_in_development=CL:0000049,CL:0000134 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 66: | Line 40: | ||
|fonse_treatment=FF:0000343,FF:0011468,FF:11775-124A2 | |fonse_treatment=FF:0000343,FF:0011468,FF:11775-124A2 | ||
|fonse_treatment_closure=FF:0000343,FF:0011468,FF:11775-124A2 | |fonse_treatment_closure=FF:0000343,FF:0011468,FF:11775-124A2 | ||
|has_quality= | |||
|id=FF:11775-124A2 | |||
|is_a=EFO:0002091;;FF:0011468 | |||
|is_obsolete= | |||
|library_id=CNhs13212 | |||
|library_id_phase_based=2:CNhs13212 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;11775 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;11775 | |||
|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.primary_cell.hCAGE/CD41%252b%2520megakaryocyte%2520control%252c%2520donor1.CNhs13212.11775-124A2.mm10.nobarcode.bam | |||
|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.primary_cell.hCAGE/CD41%252b%2520megakaryocyte%2520control%252c%2520donor1.CNhs13212.11775-124A2.mm10.nobarcode.ctss.bed.gz | |||
|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.primary_cell.hCAGE/CD41%252b%2520megakaryocyte%2520control%252c%2520donor1.CNhs13212.11775-124A2.mm9.nobarcode.bam | |||
|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.primary_cell.hCAGE/CD41%252b%2520megakaryocyte%2520control%252c%2520donor1.CNhs13212.11775-124A2.mm9.ctss.bed.gz | |||
|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.primary_cell.hCAGE/CD41%252b%2520megakaryocyte%2520control%252c%2520donor1.CNhs13212.11775-124A2.mm9.nobarcode.rdna.fa.gz | |||
|name=CD41+ megakaryocyte control, donor1 | |||
|namespace= | |||
|part_of= | |||
|profile_cagescan=,,, | |||
|profile_hcage=CNhs13212,LSID1005,release012,COMPLETED | |||
|profile_rnaseq= | |||
|profile_srnaseq=,,, | |||
|repeat_enrich_byfamily=-0.11779559634038,0,0,0.168259719722084,0.168259719722084,0,-0.08294348874013,0,0,0,0,-0.0843392403965415,0,0,0,0,0,0,0.0973357319387794,0,0.0595391808241505,0,0,0,0,0,0,0,0,0,0,0.103034617920411,0.286289245372825,0,0,0,0,0,-0.0189759597665872,-0.091558018055706,0.0214670340411942,-0.920603673123874,-0.269868638010351,0.252526681274343,0,0,0,0,0,0,0,0,0,0,0,-0.00239785420948765,0,0,0,0.0636076933539527,0.0265550191268687,0,0,0.397453369117035,0.411166798147301,0,-0.117389802908326,0.0730892827473831,-0.0944833494171298,-0.00478886231987713,0,-0.0780086007519514,-0.124186127393379,-0.167854542036812,0,0,-0.047641328176976,-0.141556096101683,0.0544007859623051,0.133602216896486,0,0,0,0,0,0,0.0339058309654363,-0.104493612570352,0.453707194730263,0,0,0,0.168259719722084,0 | |||
|rna_box=124 | |||
|rna_catalog_number= | |||
|rna_concentration=0.23 | |||
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0 | |||
|rna_lot_number=PBS-1 | |||
|rna_od260/230= | |||
|rna_od260/280=1.9 | |||
|rna_position=A2 | |||
|rna_rin=10 | |||
|rna_sample_type=total RNA | |||
|rna_tube_id=124A2 | |||
|rna_weight_ug=4.52 | |||
|sample_age= | |||
|sample_category=primary cells | |||
|sample_cell_catalog= | |||
|sample_cell_line= | |||
|sample_cell_lot= | |||
|sample_cell_type=megakaryocyte | |||
|sample_collaboration=Hozumi Motohashi (Tohoku University Graduate School of Medicine) | |||
|sample_company= | |||
|sample_description= | |||
|sample_dev_stage= | |||
|sample_disease= | |||
|sample_donor(cell lot)= | |||
|sample_ethnicity= | |||
|sample_experimental_condition= | |||
|sample_id=11775 | |||
|sample_note= | |||
|sample_sex= | |||
|sample_species=Mouse (Mus musculus) | |||
|sample_strain= | |||
|sample_tissue=bone marrow | |||
|top_motifs=POU2F1..3:4.33089344995;IRF7:3.94638109683;POU5F1:3.46533426057;SPI1:2.58811633023;DMAP1_NCOR{1,2}_SMARC:2.55991589738;RUNX1..3:2.55773387884;SPIB:2.44572587688;ETS1,2:2.44135225217;ELF1,2,4:2.42156238888;IRF1,2:2.410607815;NFKB1_REL_RELA:2.35838159616;ALX4:2.05391218698;YY1:1.90211983369;PDX1:1.33709708993;PAX2:1.32930853865;ELK1,4_GABP{A,B1}:1.28817768898;ZBTB16:1.27915297555;PPARG:1.23486571335;FOXO1,3,4:1.11410307158;FOXP3:1.09798958264;OCT4_SOX2{dimer}:1.02047183716;AIRE:1.01130629303;BPTF:1.00705951325;ATF5_CREB3:0.984590434853;NFIX:0.976980410515;SREBF1,2:0.927680713077;TLX2:0.925625548026;NFATC1..3:0.912554598916;PAX4:0.853905795513;POU1F1:0.826972293639;ALX1:0.826247767966;PITX1..3:0.749174538799;RXRA_VDR{dimer}:0.662605525492;bHLH_family:0.554819777349;PAX8:0.539440101807;ATF4:0.533157073419;CREB1:0.530887451443;CDX1,2,4:0.52790347365;TAL1_TCF{3,4,12}:0.435376549758;FOXQ1:0.419585796392;MYB:0.412809325501;NKX2-2,8:0.391049269668;FOX{I1,J2}:0.388478752529;E2F1..5:0.298273553035;STAT5{A,B}:0.268896414163;HOX{A5,B5}:0.249337482555;PBX1:0.229707255599;CEBPA,B_DDIT3:0.223994059754;SPZ1:0.166240032777;FOXP1:0.131580859464;NKX2-1,4:0.125308298148;NANOG{mouse}:0.0891001783829;NR6A1:0.071625099774;RFX2..5_RFXANK_RFXAP:0.0485892456468;EBF1:0.005739871312;NFE2L1:-0.0170939985127;ARID5B:-0.02643528587;LHX3,4:-0.0395872199863;LMO2:-0.0636609599222;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.0699627607519;CRX:-0.119062508463;ZEB1:-0.12684932055;FOX{D1,D2}:-0.148143659711;IKZF2:-0.181730664914;NKX3-1:-0.186334813503;POU6F1:-0.212432068558;PAX6:-0.222751540329;STAT2,4,6:-0.277358531132;ATF6:-0.28057293536;PRDM1:-0.284782284303;NRF1:-0.291788091988;EP300:-0.292814696844;AHR_ARNT_ARNT2:-0.304775082506;NANOG:-0.3062139705;GATA6:-0.360632100445;NFY{A,B,C}:-0.363727895281;ESR1:-0.410736561201;MYFfamily:-0.425054664229;FOXM1:-0.436536032422;SOX17:-0.454476892765;ZNF384:-0.476367024787;MEF2{A,B,C,D}:-0.486782933515;TBX4,5:-0.48941235065;TEF:-0.527095611795;GATA4:-0.536087506361;JUN:-0.553547799787;HLF:-0.560083578773;NFIL3:-0.56262539659;MYOD1:-0.576142365636;POU3F1..4:-0.58729431226;VSX1,2:-0.598306865224;EVI1:-0.601116599041;ZFP161:-0.608565079506;FOX{F1,F2,J1}:-0.610691876609;SRF:-0.63764752822;NHLH1,2:-0.640791893128;SNAI1..3:-0.662334318947;STAT1,3:-0.66881408522;CDC5L:-0.687401967805;HIF1A:-0.710760754583;FOS_FOS{B,L1}_JUN{B,D}:-0.718404124256;PRRX1,2:-0.719467341539;NR3C1:-0.720735151536;ZNF423:-0.746792786357;HNF4A_NR2F1,2:-0.750727148291;TGIF1:-0.757150144875;SMAD1..7,9:-0.762096211421;SOX{8,9,10}:-0.785787113958;HNF1A:-0.796077826339;NR1H4:-0.796280162314;SOX2:-0.800916961419;HMGA1,2:-0.802566445491;ZNF143:-0.80444590697;PAX1,9:-0.815127759326;RFX1:-0.815258927221;RORA:-0.831711218411;HOXA9_MEIS1:-0.881401432589;FOXN1:-0.886891675321;TFDP1:-0.922513892414;ATF2:-0.928262371551;TBP:-0.935271958695;NKX3-2:-0.956384791583;NR5A1,2:-0.959852709177;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.968323086505;HSF1,2:-0.992027491568;NKX6-1,2:-1.01292854481;CUX2:-1.01817093489;BACH2:-1.02831543033;FOXA2:-1.02837898915;ADNP_IRX_SIX_ZHX:-1.03833296637;MTE{core}:-1.08125495684;HOX{A4,D4}:-1.08923758498;FOSL2:-1.09713860753;MTF1:-1.10054931685;EGR1..3:-1.10423468603;ZNF238:-1.1236044032;GFI1:-1.1283599025;ZBTB6:-1.1426082656;HBP1_HMGB_SSRP1_UBTF:-1.15986034617;BREu{core}:-1.21605422019;MED-1{core}:-1.23646982468;T:-1.24027262495;REST:-1.24225120795;FOXD3:-1.28825095897;ZNF148:-1.30794333485;NKX2-3_NKX2-5:-1.34034272151;HAND1,2:-1.34349941656;MZF1:-1.34972775971;HES1:-1.37077772926;FOXL1:-1.41034438791;TP53:-1.43979054846;EN1,2:-1.44077063779;IKZF1:-1.44234215205;SOX5:-1.48431392051;RREB1:-1.49489444798;TFCP2:-1.49546564975;HMX1:-1.51032291559;TFAP2{A,C}:-1.52070002948;RBPJ:-1.53558828472;ONECUT1,2:-1.54179011411;AR:-1.54462674111;NFE2:-1.57599783549;TFAP2B:-1.58019343089;MAFB:-1.61230890861;RXR{A,B,G}:-1.61406993463;MYBL2:-1.68760855786;GTF2A1,2:-1.7656097823;PATZ1:-1.79443186783;ESRRA:-1.80965169892;UFEwm:-1.82306264071;GZF1:-1.83025862554;KLF4:-1.83611740028;LEF1_TCF7_TCF7L1,2:-1.87450148477;TEAD1:-1.9492917857;ZIC1..3:-1.95055003679;TOPORS:-1.97985775171;DBP:-1.99813770206;SP1:-2.02804831998;HIC1:-2.04319696163;XCPE1{core}:-2.0512358887;GTF2I:-2.05388841352;MAZ:-2.05738292054;GLI1..3:-2.06611508237;PAX5:-2.17042172824;TFAP4:-2.18633009344;GFI1B:-2.22407387938;NFE2L2:-2.22593172318;GCM1,2:-2.30680852045;TLX1..3_NFIC{dimer}:-2.60944494831 | |top_motifs=POU2F1..3:4.33089344995;IRF7:3.94638109683;POU5F1:3.46533426057;SPI1:2.58811633023;DMAP1_NCOR{1,2}_SMARC:2.55991589738;RUNX1..3:2.55773387884;SPIB:2.44572587688;ETS1,2:2.44135225217;ELF1,2,4:2.42156238888;IRF1,2:2.410607815;NFKB1_REL_RELA:2.35838159616;ALX4:2.05391218698;YY1:1.90211983369;PDX1:1.33709708993;PAX2:1.32930853865;ELK1,4_GABP{A,B1}:1.28817768898;ZBTB16:1.27915297555;PPARG:1.23486571335;FOXO1,3,4:1.11410307158;FOXP3:1.09798958264;OCT4_SOX2{dimer}:1.02047183716;AIRE:1.01130629303;BPTF:1.00705951325;ATF5_CREB3:0.984590434853;NFIX:0.976980410515;SREBF1,2:0.927680713077;TLX2:0.925625548026;NFATC1..3:0.912554598916;PAX4:0.853905795513;POU1F1:0.826972293639;ALX1:0.826247767966;PITX1..3:0.749174538799;RXRA_VDR{dimer}:0.662605525492;bHLH_family:0.554819777349;PAX8:0.539440101807;ATF4:0.533157073419;CREB1:0.530887451443;CDX1,2,4:0.52790347365;TAL1_TCF{3,4,12}:0.435376549758;FOXQ1:0.419585796392;MYB:0.412809325501;NKX2-2,8:0.391049269668;FOX{I1,J2}:0.388478752529;E2F1..5:0.298273553035;STAT5{A,B}:0.268896414163;HOX{A5,B5}:0.249337482555;PBX1:0.229707255599;CEBPA,B_DDIT3:0.223994059754;SPZ1:0.166240032777;FOXP1:0.131580859464;NKX2-1,4:0.125308298148;NANOG{mouse}:0.0891001783829;NR6A1:0.071625099774;RFX2..5_RFXANK_RFXAP:0.0485892456468;EBF1:0.005739871312;NFE2L1:-0.0170939985127;ARID5B:-0.02643528587;LHX3,4:-0.0395872199863;LMO2:-0.0636609599222;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.0699627607519;CRX:-0.119062508463;ZEB1:-0.12684932055;FOX{D1,D2}:-0.148143659711;IKZF2:-0.181730664914;NKX3-1:-0.186334813503;POU6F1:-0.212432068558;PAX6:-0.222751540329;STAT2,4,6:-0.277358531132;ATF6:-0.28057293536;PRDM1:-0.284782284303;NRF1:-0.291788091988;EP300:-0.292814696844;AHR_ARNT_ARNT2:-0.304775082506;NANOG:-0.3062139705;GATA6:-0.360632100445;NFY{A,B,C}:-0.363727895281;ESR1:-0.410736561201;MYFfamily:-0.425054664229;FOXM1:-0.436536032422;SOX17:-0.454476892765;ZNF384:-0.476367024787;MEF2{A,B,C,D}:-0.486782933515;TBX4,5:-0.48941235065;TEF:-0.527095611795;GATA4:-0.536087506361;JUN:-0.553547799787;HLF:-0.560083578773;NFIL3:-0.56262539659;MYOD1:-0.576142365636;POU3F1..4:-0.58729431226;VSX1,2:-0.598306865224;EVI1:-0.601116599041;ZFP161:-0.608565079506;FOX{F1,F2,J1}:-0.610691876609;SRF:-0.63764752822;NHLH1,2:-0.640791893128;SNAI1..3:-0.662334318947;STAT1,3:-0.66881408522;CDC5L:-0.687401967805;HIF1A:-0.710760754583;FOS_FOS{B,L1}_JUN{B,D}:-0.718404124256;PRRX1,2:-0.719467341539;NR3C1:-0.720735151536;ZNF423:-0.746792786357;HNF4A_NR2F1,2:-0.750727148291;TGIF1:-0.757150144875;SMAD1..7,9:-0.762096211421;SOX{8,9,10}:-0.785787113958;HNF1A:-0.796077826339;NR1H4:-0.796280162314;SOX2:-0.800916961419;HMGA1,2:-0.802566445491;ZNF143:-0.80444590697;PAX1,9:-0.815127759326;RFX1:-0.815258927221;RORA:-0.831711218411;HOXA9_MEIS1:-0.881401432589;FOXN1:-0.886891675321;TFDP1:-0.922513892414;ATF2:-0.928262371551;TBP:-0.935271958695;NKX3-2:-0.956384791583;NR5A1,2:-0.959852709177;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.968323086505;HSF1,2:-0.992027491568;NKX6-1,2:-1.01292854481;CUX2:-1.01817093489;BACH2:-1.02831543033;FOXA2:-1.02837898915;ADNP_IRX_SIX_ZHX:-1.03833296637;MTE{core}:-1.08125495684;HOX{A4,D4}:-1.08923758498;FOSL2:-1.09713860753;MTF1:-1.10054931685;EGR1..3:-1.10423468603;ZNF238:-1.1236044032;GFI1:-1.1283599025;ZBTB6:-1.1426082656;HBP1_HMGB_SSRP1_UBTF:-1.15986034617;BREu{core}:-1.21605422019;MED-1{core}:-1.23646982468;T:-1.24027262495;REST:-1.24225120795;FOXD3:-1.28825095897;ZNF148:-1.30794333485;NKX2-3_NKX2-5:-1.34034272151;HAND1,2:-1.34349941656;MZF1:-1.34972775971;HES1:-1.37077772926;FOXL1:-1.41034438791;TP53:-1.43979054846;EN1,2:-1.44077063779;IKZF1:-1.44234215205;SOX5:-1.48431392051;RREB1:-1.49489444798;TFCP2:-1.49546564975;HMX1:-1.51032291559;TFAP2{A,C}:-1.52070002948;RBPJ:-1.53558828472;ONECUT1,2:-1.54179011411;AR:-1.54462674111;NFE2:-1.57599783549;TFAP2B:-1.58019343089;MAFB:-1.61230890861;RXR{A,B,G}:-1.61406993463;MYBL2:-1.68760855786;GTF2A1,2:-1.7656097823;PATZ1:-1.79443186783;ESRRA:-1.80965169892;UFEwm:-1.82306264071;GZF1:-1.83025862554;KLF4:-1.83611740028;LEF1_TCF7_TCF7L1,2:-1.87450148477;TEAD1:-1.9492917857;ZIC1..3:-1.95055003679;TOPORS:-1.97985775171;DBP:-1.99813770206;SP1:-2.02804831998;HIC1:-2.04319696163;XCPE1{core}:-2.0512358887;GTF2I:-2.05388841352;MAZ:-2.05738292054;GLI1..3:-2.06611508237;PAX5:-2.17042172824;TFAP4:-2.18633009344;GFI1B:-2.22407387938;NFE2L2:-2.22593172318;GCM1,2:-2.30680852045;TLX1..3_NFIC{dimer}:-2.60944494831 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:11775-124A2;search_select_hide=table117:11775-124A2 | |||
}} | }} |
Latest revision as of 18:19, 4 June 2020
Name: | CD41+ megakaryocyte control, donor1 |
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Species: | Mouse (Mus musculus) |
Library ID: | CNhs13212 |
Sample type: | primary cells |
Genomic View: | UCSC |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
CNhs13212
0 | 0 |
1 | 0 |
10 | 0 |
100 | 0 |
1000 | -0.00367 |
1001 | -0.00378 |
1002 | -0.116 |
1003 | -0.166 |
1004 | 0 |
1005 | 0.212 |
1006 | -0.143 |
1007 | -0.198 |
1008 | 0 |
1009 | -0.19 |
101 | 0.158 |
1010 | 0 |
1011 | 0.105 |
1012 | 0 |
1013 | -0.126 |
1014 | -0.0874 |
1015 | -0.0904 |
1016 | -0.594 |
1017 | 0 |
1018 | 0 |
1019 | 0 |
102 | 0.212 |
1020 | 0.0953 |
1021 | 0.212 |
1022 | -0.227 |
1023 | 0.0294 |
1024 | -0.14 |
1025 | -0.0611 |
1026 | 0 |
1027 | -0.048 |
1028 | 0 |
1029 | -0.119 |
103 | -0.0887 |
1030 | 0.619 |
1031 | -0.848 |
1032 | -0.536 |
1033 | 0.0526 |
1034 | 0 |
1035 | 0 |
1036 | 0.22 |
1037 | 0 |
1038 | -0.258 |
1039 | -0.0403 |
104 | 0 |
1040 | -0.172 |
1041 | 0 |
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13212
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13212
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.13 |
10 | 10 | 0.0316 |
100 | 100 | 0.829 |
101 | 101 | 0.989 |
102 | 102 | 0.59 |
103 | 103 | 0.0689 |
104 | 104 | 0.714 |
105 | 105 | 0.749 |
106 | 106 | 0.297 |
107 | 107 | 0.852 |
108 | 108 | 0.558 |
109 | 109 | 0.124 |
11 | 11 | 0.167 |
110 | 110 | 0.0575 |
111 | 111 | 0.0665 |
112 | 112 | 0.0435 |
113 | 113 | 0.291 |
114 | 114 | 0.154 |
115 | 115 | 0.652 |
116 | 116 | 0.922 |
117 | 117 | 6.26559e-4 |
118 | 118 | 0.113 |
119 | 119 | 0.639 |
12 | 12 | 0.467 |
120 | 120 | 0.432 |
121 | 121 | 0.415 |
122 | 122 | 0.847 |
123 | 123 | 0.8 |
124 | 124 | 0.878 |
125 | 125 | 0.161 |
126 | 126 | 0.239 |
127 | 127 | 0.453 |
128 | 128 | 0.145 |
129 | 129 | 0.128 |
13 | 13 | 0.079 |
130 | 130 | 0.904 |
131 | 131 | 0.841 |
132 | 132 | 0.696 |
133 | 133 | 0.989 |
134 | 134 | 0.949 |
135 | 135 | 0.974 |
136 | 136 | 0.888 |
137 | 137 | 0.132 |
138 | 138 | 0.789 |
139 | 139 | 0.274 |
14 | 14 | 0.968 |
140 | 140 | 0.843 |
141 | 141 | 0.159 |
142 | 142 | 0.661 |
143 | 143 | 0.0123 |
144 | 144 | 0.535 |
145 | 145 | 0.119 |
146 | 146 | 0.845 |
147 | 147 | 0.805 |
148 | 148 | 0.0892 |
149 | 149 | 0.579 |
15 | 15 | 0.0869 |
150 | 150 | 0.328 |
151 | 151 | 0.16 |
152 | 152 | 0.696 |
153 | 153 | 0.188 |
154 | 154 | 0.422 |
155 | 155 | 0.249 |
156 | 156 | 1.17834e-25 |
157 | 157 | 0.839 |
158 | 158 | 0.128 |
159 | 159 | 0.745 |
160 | 160 | 0.996 |
161 | 161 | 0.0521 |
162 | 162 | 0.322 |
163 | 163 | 0.269 |
164 | 164 | 0.0905 |
165 | 165 | 0.316 |
166 | 166 | 0.506 |
167 | 167 | 0.136 |
168 | 168 | 0.92 |
169 | 169 | 0.0635 |
17 | 17 | 0.425 |
18 | 18 | 0.273 |
19 | 19 | 0.892 |
2 | 2 | 0.161 |
20 | 20 | 0.0328 |
21 | 21 | 0.329 |
22 | 22 | 0.826 |
23 | 23 | 0.348 |
24 | 24 | 0.464 |
25 | 25 | 0.189 |
26 | 26 | 0.0281 |
27 | 27 | 0.708 |
28 | 28 | 0.221 |
29 | 29 | 0.0192 |
3 | 3 | 0.051 |
30 | 30 | 0.233 |
31 | 31 | 0.931 |
32 | 32 | 0.802 |
33 | 33 | 0.217 |
34 | 34 | 0.717 |
35 | 35 | 0.0888 |
36 | 36 | 0.045 |
37 | 37 | 0.0684 |
38 | 38 | 0.716 |
39 | 39 | 0.533 |
4 | 4 | 0.768 |
40 | 40 | 0.204 |
41 | 41 | 0.361 |
42 | 42 | 0.121 |
43 | 43 | 0.139 |
44 | 44 | 0.276 |
45 | 45 | 0.753 |
46 | 46 | 0.165 |
47 | 47 | 0.215 |
48 | 48 | 0.163 |
49 | 49 | 0.108 |
5 | 5 | 0.0424 |
50 | 50 | 0.642 |
51 | 51 | 0.884 |
52 | 52 | 0.334 |
53 | 53 | 0.447 |
54 | 54 | 0.829 |
55 | 55 | 0.482 |
56 | 56 | 0.702 |
57 | 57 | 0.7 |
58 | 58 | 0.128 |
59 | 59 | 0.287 |
6 | 6 | 0.613 |
60 | 60 | 0.662 |
61 | 61 | 0.106 |
62 | 62 | 0.0526 |
63 | 63 | 0.715 |
64 | 64 | 0.614 |
65 | 65 | 0.711 |
66 | 66 | 0.981 |
67 | 67 | 0.711 |
68 | 68 | 0.0743 |
69 | 69 | 0.785 |
7 | 7 | 0.186 |
70 | 70 | 0.0121 |
71 | 71 | 0.0429 |
72 | 72 | 0.227 |
73 | 73 | 0.107 |
74 | 74 | 0.869 |
75 | 75 | 0.0033 |
76 | 76 | 0.0168 |
77 | 77 | 0.432 |
78 | 78 | 0.0933 |
79 | 79 | 0.723 |
8 | 8 | 0.0566 |
80 | 80 | 0.0148 |
81 | 81 | 0.531 |
82 | 82 | 0.202 |
83 | 83 | 0.148 |
84 | 84 | 0.513 |
85 | 85 | 0.509 |
86 | 86 | 0.157 |
87 | 87 | 0.515 |
88 | 88 | 0.518 |
89 | 89 | 0.561 |
9 | 9 | 0.873 |
90 | 90 | 0.0211 |
91 | 91 | 0.659 |
92 | 92 | 0.207 |
93 | 93 | 0.306 |
94 | 94 | 0.174 |
95 | 95 | 0.16 |
96 | 96 | 0.313 |
97 | 97 | 0.804 |
98 | 98 | 0.137 |
99 | 99 | 0.342 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13212
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0011468 mouse CD41-positive megakaryocyte control sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000556 (megakaryocyte)
UBERON: Anatomy
0000468 (multi-cellular organism)
0002371 (bone marrow)
0001474 (bone element)
0000479 (tissue)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0004765 (skeletal element)
0010317 (germ layer / neural crest derived structure)
0002204 (musculoskeletal system)
0001434 (skeletal system)
0002390 (hematopoietic system)
0002193 (hemolymphoid system)
0002405 (immune system)
FF: FANTOM5
0000102 (sample by type)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000343 (control treatment sample)
0011468 (mouse CD41-positive megakaryocyte control sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)