FFCP PHASE1:Hg19::chr10:88494687..88494698,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:88494687..88494698,+ to FFCP PHASE1:Hg19::chr10:88494687..88494698,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:88494687..88494698,+ | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_at_chr10:88494687..88494698,+ | |||
|id=chr10:88494687..88494698,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;4.83e-18;1!UBERON:0004874;4.83e-18;1!UBERON:0004140;1.12e-17;1!UBERON:0008814;1.64e-09;2!UBERON:0010056;1.64e-09;2!UBERON:0003104;1.63e-08;31!UBERON:0006603;4.97e-07;65 | |||
|ontology_enrichment_disease=DOID:114!9.24e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.64e-33;2!DOID:178;1.12e-17;1!DOID:326;1.12e-17;1!DOID:3978;1.12e-17;1!DOID:3394;1.12e-17;1!DOID:5844;1.12e-17;1!DOID:1287;2.59e-17;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.92e-34,2;DOID:178,1.03e-17,1;DOID:326,1.03e-17,1;DOID:3978,1.03e-17,1;DOID:3394,1.03e-17,1;DOID:5844,1.03e-17,1;DOID:1287,2.02e-17,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.30e-44!115;UBERON:0001049!2.29e-16!57;UBERON:0005068!2.29e-16!57;UBERON:0006241!2.29e-16!57;UBERON:0007135!2.29e-16!57;UBERON:0002346!1.67e-15!90;UBERON:0003075!6.30e-15!86;UBERON:0007284!6.30e-15!86;UBERON:0002616!8.07e-14!59;UBERON:0005743!5.13e-13!86;UBERON:0001017!1.78e-12!82;UBERON:0000955!1.83e-12!69;UBERON:0006238!1.83e-12!69;UBERON:0006331!1.54e-11!3;UBERON:0002020!2.26e-11!34;UBERON:0003528!2.26e-11!34;UBERON:0000073!2.49e-11!94;UBERON:0001016!2.49e-11!94;UBERON:0000153!3.18e-11!129;UBERON:0007811!3.18e-11!129;UBERON:0001893!3.20e-11!34;UBERON:0002298!1.07e-10!8;UBERON:0002780!1.22e-10!41;UBERON:0001890!1.22e-10!41;UBERON:0006240!1.22e-10!41;UBERON:0003080!2.51e-10!42;UBERON:0000033!9.19e-10!123;UBERON:0002791!1.00e-09!33;UBERON:0002308!1.19e-09!9;UBERON:0000125!1.19e-09!9;UBERON:0000924!2.91e-09!173;UBERON:0006601!2.91e-09!173;UBERON:0001630!7.11e-09!2;UBERON:0005090!7.11e-09!2;UBERON:0004121!9.17e-09!169;UBERON:0000341!1.61e-08!2;UBERON:0001869!3.86e-08!32;UBERON:0002148!3.98e-08!2;UBERON:0009662!3.98e-08!2;UBERON:0003076!9.28e-08!15;UBERON:0003057!9.28e-08!15;UBERON:0003056!1.81e-07!61;UBERON:0004111!5.19e-07!241;UBERON:0004733!5.90e-07!12;UBERON:0002028!5.90e-07!12;UBERON:0007277!5.90e-07!12;UBERON:0001950!8.38e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;3.94e-34;2!UBERON:0001630;3.94e-34;2!UBERON:0001723;5.76e-23;3!UBERON:0001033;5.76e-23;3!UBERON:0001389;2.66e-18;1!UBERON:0000026;2.66e-18;1!UBERON:0008784;2.66e-18;1!UBERON:0006058;2.66e-18;1!UBERON:0003663;2.66e-18;1!UBERON:0004256;2.66e-18;1!UBERON:0004708;2.66e-18;1!UBERON:0002101;2.66e-18;1!UBERON:0004709;2.66e-18;1!UBERON:0002529;2.66e-18;1!UBERON:0010538;2.66e-18;1!UBERON:0003661;2.66e-18;1!UBERON:0010890;2.66e-18;1!UBERON:0002471;2.66e-18;1!UBERON:0001383;2.66e-18;1!UBERON:0010758;2.66e-18;1!UBERON:0010707;2.66e-18;1!UBERON:0000978;2.66e-18;1!UBERON:0002103;2.66e-18;1!UBERON:0001665;2.66e-18;1!UBERON:0003823;2.66e-18;1!UBERON:0000154;2.66e-18;1!UBERON:0010709;2.66e-18;1!UBERON:0002146;3.16e-18;1!UBERON:0005623;3.16e-18;1!UBERON:0002079;4.83e-18;1!UBERON:0000989;4.83e-18;1!UBERON:0008811;4.83e-18;1!UBERON:0002426;1.12e-17;1!UBERON:0003831;1.12e-17;1!UBERON:0003898;1.12e-17;1!UBERON:0004830;1.12e-17;1!UBERON:0003830;1.12e-17;1!UBERON:0005175;1.12e-17;1!UBERON:0001774;1.12e-17;1!UBERON:0001103;1.12e-17;1!UBERON:0001134;6.54e-17;16!UBERON:0002036;6.54e-17;16!UBERON:0007100;1.41e-16;25!UBERON:0002081;1.07e-09;2!UBERON:0002385;3.59e-09;31!UBERON:0001015;3.59e-09;31!UBERON:0000383;3.59e-09;31!UBERON:0000948;2.02e-07;22!UBERON:0003978;6.14e-07;3!UBERON:0000946;6.14e-07;3!UBERON:0004151;7.08e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,3.06e-34,2;UBERON:0001630,3.06e-34,2;UBERON:0001723,8.99e-23,3;UBERON:0001033,8.99e-23,3;UBERON:0010056,8.99e-23,3;UBERON:0005418,2.66e-18,1;UBERON:0001389,2.66e-18,1;UBERON:0000026,2.66e-18,1;UBERON:0008784,2.66e-18,1;UBERON:0006058,2.66e-18,1;UBERON:0003663,2.66e-18,1;UBERON:0004256,2.66e-18,1;UBERON:0004708,2.66e-18,1;UBERON:0002101,2.66e-18,1;UBERON:0004709,2.66e-18,1;UBERON:0002529,2.66e-18,1;UBERON:0010538,2.66e-18,1;UBERON:0003661,2.66e-18,1;UBERON:0010890,2.66e-18,1;UBERON:0002471,2.66e-18,1;UBERON:0001383,2.66e-18,1;UBERON:0004357,2.66e-18,1;UBERON:0004347,2.66e-18,1;UBERON:0005420,2.66e-18,1;UBERON:0005732,2.66e-18,1;UBERON:0010758,2.66e-18,1;UBERON:0010707,2.66e-18,1;UBERON:0000978,2.66e-18,1;UBERON:0002103,2.66e-18,1;UBERON:0001665,2.66e-18,1;UBERON:0003823,2.66e-18,1;UBERON:0000154,2.66e-18,1;UBERON:0010709,2.66e-18,1;UBERON:0005733,2.66e-18,1;UBERON:0005730,2.66e-18,1;UBERON:0002146,3.16e-18,1;UBERON:0005623,3.16e-18,1;UBERON:0002079,3.75e-18,1;UBERON:0000989,4.44e-18,1;UBERON:0008811,4.44e-18,1;UBERON:0006258,4.44e-18,1;UBERON:0005876,4.44e-18,1;UBERON:0004874,4.44e-18,1;UBERON:0002426,8.72e-18,1;UBERON:0003831,8.72e-18,1;UBERON:0003898,8.72e-18,1;UBERON:0004830,8.72e-18,1;UBERON:0003830,8.72e-18,1;UBERON:0005175,8.72e-18,1;UBERON:0001774,8.72e-18,1;UBERON:0001103,8.72e-18,1;UBERON:0010084,8.72e-18,1;UBERON:0007100,2.14e-15,27;UBERON:0003103,1.62e-11,68;UBERON:0002081,9.46e-10,2;UBERON:0010227,9.46e-10,2;UBERON:0007023,9.54e-09,114;UBERON:0001042,1.67e-07,10;UBERON:0009145,1.67e-07,10;UBERON:0003978,6.14e-07,3;UBERON:0009751,6.14e-07,3;UBERON:0000946,6.14e-07,3;UBERON:0002523,6.14e-07,3;UBERON:0005983,6.14e-07,3;UBERON:0002165,6.14e-07,3;UBERON:0002062,6.14e-07,3;UBERON:0007280,6.14e-07,3;UBERON:0004151,6.50e-07,3;UBERON:0006562,6.74e-07,11;UBERON:0000948,7.62e-07,24;UBERON:0005498,7.62e-07,24;UBERON:0004140,7.62e-07,24;UBERON:0009881,7.62e-07,24;UBERON:0004141,7.62e-07,24;UBERON:0003084,7.62e-07,24;UBERON:0007005,7.62e-07,24;UBERON:0004139,7.62e-07,24;UBERON:0004291,7.62e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,5.27068975226872,0,1.59743200399193,1.71690419254628,0.223171457441873,1.41085292222125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.478901577171454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,2.48105589194647,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,7.76914604625474,1.53994210284371,2.3196288626764,0,0,0,0,0,0.109940516745429,0,0,0,0.470317296361523,0.245148321753905,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0.716697915757256,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.20686599172379,0.852935927603924,0.714193294391221,0,0,0,0,0,1.30630048738177,2.05339980651169,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,5.27068975226872,0,1.59743200399193,1.71690419254628,0.223171457441873,1.41085292222125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.478901577171454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,2.48105589194647,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,7.76914604625474,1.53994210284371,2.3196288626764,0,0,0,0,0,0.109940516745429,0,0,0,0.470317296361523,0.245148321753905,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0.716697915757256,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.20686599172379,0.852935927603924,0.714193294391221,0,0,0,0,0,1.30630048738177,2.05339980651169,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:88494687..88494698,+ | |||
}} | }} |
Latest revision as of 16:21, 23 July 2015
Short description: | p@chr10:88494687..88494698, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:88494687..88494698, + |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 9.92e-34 | 2 |
vascular disease | 1.03e-17 | 1 |
ischemia | 1.03e-17 | 1 |
extrinsic cardiomyopathy | 1.03e-17 | 1 |
myocardial ischemia | 1.03e-17 | 1 |
myocardial infarction | 1.03e-17 | 1 |
cardiovascular system disease | 2.02e-17 | 4 |