FFCP PHASE1:Hg19::chr11:110226020..110226044,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=96bp_to_ENST00000526703_5end | |||
|cluster_id=chr11:110226020..110226044,+ | |||
|coexpression_cluster_id=C790 | |||
|description=CAGE_peak_1_at_ENST00000526703_5end | |||
|id=chr11:110226020..110226044,+ | |||
|ontology_enrichment_celltype=CL:0000147!1.56e-18!14;CL:0000148!6.01e-15!10;CL:0000541!6.01e-15!10;CL:0000149!1.09e-08!4;CL:0000710!8.04e-08!20;CL:0002150!4.40e-07!3;CL:0000861!4.40e-07!3;CL:0002586!5.37e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000147;6.45e-13;14!CL:0000148;7.43e-12;10!CL:0002567;1.39e-10;3!CL:0002563;2.44e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,8.02e-13,14;CL:0000148,9.48e-12,10;CL:0000541,9.48e-12,10;CL:0002567,1.69e-10,3;CL:0002563,2.68e-08,4;CL:0000333,1.54e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.40e-08!143;DOID:171!3.90e-07!10;DOID:3095!4.17e-07!22;DOID:2994!4.17e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:1909;6.53e-16;2!DOID:171;9.99e-13;10!DOID:3095;1.16e-08;22!DOID:2994;1.16e-08;22!DOID:5093;2.83e-08;4!DOID:1612;2.83e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,7.31e-16,2;DOID:171,9.99e-13,10;DOID:3095,1.14e-08,22;DOID:2994,1.14e-08,22;DOID:5093,2.68e-08,4;DOID:1612,2.68e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001781!5.37e-07!3;UBERON:0001782!5.37e-07!3;UBERON:0005424!5.37e-07!3;UBERON:0000966!5.75e-07!5;UBERON:0005388!5.75e-07!5;UBERON:0001802!5.75e-07!5;UBERON:0001737!7.35e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.99e-18;4!UBERON:0000923;2.99e-18;4!UBERON:0010316;2.99e-18;4!UBERON:0005291;2.99e-18;4!UBERON:0002050;1.03e-14;5!UBERON:0005423;1.03e-14;5!UBERON:0001052;2.44e-08;4!UBERON:0001242;2.44e-08;4!UBERON:0001262;2.44e-08;4!UBERON:0004786;2.44e-08;4!UBERON:0004808;2.44e-08;4!UBERON:0001277;2.44e-08;4!UBERON:0004907;7.81e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.68e-08,4;UBERON:0001262,2.68e-08,4;UBERON:0004786,2.68e-08,4;UBERON:0004808,2.68e-08,4;UBERON:0001277,2.68e-08,4;UBERON:0001052,2.78e-08,4;UBERON:0004907,8.66e-07,5 | |||
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| ||
|short_description=p1@ENST00000526703 | |||
}} | }} |
Latest revision as of 18:01, 23 July 2015
Short description: | p1@ENST00000526703 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000526703_5end |
Coexpression cluster: | C790_neuroectodermal_carcinoid_neuroblastoma_neuroepithelioma_acute_peripheral_granulocyte |
Association with transcript: | 96bp_to_ENST00000526703_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 8.02e-13 | 14 |
melanocyte | 9.48e-12 | 10 |
melanoblast | 9.48e-12 | 10 |
light melanocyte | 1.69e-10 | 3 |
intestinal epithelial cell | 2.68e-08 | 4 |
migratory neural crest cell | 1.54e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.68e-08 | 4 |
wall of intestine | 2.68e-08 | 4 |
gastrointestinal system mucosa | 2.68e-08 | 4 |
gastrointestinal system epithelium | 2.68e-08 | 4 |
intestinal epithelium | 2.68e-08 | 4 |
rectum | 2.78e-08 | 4 |
lower digestive tract | 8.66e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
melanoma | 7.31e-16 | 2 |
neuroectodermal tumor | 9.99e-13 | 10 |
germ cell and embryonal cancer | 1.14e-08 | 22 |
germ cell cancer | 1.14e-08 | 22 |
thoracic cancer | 2.68e-08 | 4 |
breast cancer | 2.68e-08 | 4 |