FFCP PHASE1:Hg19::chr11:45307817..45307898,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:45307817..45307898,- to FFCP PHASE1:Hg19::chr11:45307817..45307898,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57586 | |EntrezGene=57586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14962 | |HGNC=14962 | ||
|TSSclassifier=strong | |||
|UniProt=Q7L8C5 | |UniProt=Q7L8C5 | ||
|association_with_transcript=0bp_to_ENST00000020926,NM_001247987,NM_020826,uc001myq.2,uc009yku.1_5end | |||
|cluster_id=chr11:45307817..45307898,- | |||
|coexpression_cluster_id=C1635 | |||
|description=CAGE_peak_1_at_SYT13_5end | |||
|id=chr11:45307817..45307898,- | |||
|ontology_enrichment_celltype=CL:1000497!2.51e-09!18;CL:0002518!2.51e-09!18;CL:1000449!1.96e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.94e-12;17!CL:0002518;1.94e-12;17!CL:1000449;9.73e-10;15!CL:1000507;3.77e-09;10!CL:1000494;3.77e-09;10!CL:0000540;1.53e-07;6!CL:0000404;1.53e-07;6!CL:0002681;7.62e-07;12!CL:0002584;7.62e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.15e-12,17;CL:0002518,2.15e-12,17;CL:1000449,1.07e-09,15;CL:1000507,4.00e-09,10;CL:1000494,4.00e-09,10;CL:0000540,1.40e-07,6;CL:0000031,1.40e-07,6;CL:0000404,1.40e-07,6;CL:0000047,1.43e-07,8;CL:0002681,8.50e-07,12;CL:0002584,8.50e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.01e-11;82!CL:0000031;1.53e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.43e-47!82;UBERON:0005743!7.64e-47!86;UBERON:0000073!2.87e-45!94;UBERON:0001016!2.87e-45!94;UBERON:0001049!9.23e-44!57;UBERON:0005068!9.23e-44!57;UBERON:0006241!9.23e-44!57;UBERON:0007135!9.23e-44!57;UBERON:0002616!5.31e-39!59;UBERON:0000955!1.06e-38!69;UBERON:0006238!1.06e-38!69;UBERON:0007023!7.36e-37!115;UBERON:0002780!1.52e-34!41;UBERON:0001890!1.52e-34!41;UBERON:0006240!1.52e-34!41;UBERON:0003075!7.21e-34!86;UBERON:0007284!7.21e-34!86;UBERON:0002346!1.00e-33!90;UBERON:0003080!2.43e-33!42;UBERON:0001893!5.89e-29!34;UBERON:0002020!6.06e-29!34;UBERON:0003528!6.06e-29!34;UBERON:0002791!6.53e-28!33;UBERON:0001869!9.46e-28!32;UBERON:0003056!1.04e-26!61;UBERON:0002619!1.94e-24!22;UBERON:0000033!2.81e-23!123;UBERON:0000924!5.31e-23!173;UBERON:0006601!5.31e-23!173;UBERON:0004121!1.13e-22!169;UBERON:0000153!1.17e-22!129;UBERON:0007811!1.17e-22!129;UBERON:0001950!1.37e-22!20;UBERON:0000956!5.64e-22!25;UBERON:0000203!5.64e-22!25;UBERON:0000025!3.83e-19!194;UBERON:0004111!3.76e-14!241;UBERON:0000064!5.23e-13!219;UBERON:0000481!2.08e-12!347;UBERON:0000477!6.02e-12!286;UBERON:0003076!2.72e-11!15;UBERON:0003057!2.72e-11!15;UBERON:0000062!3.46e-11!511;UBERON:0000119!1.51e-10!312;UBERON:0000483!3.11e-10!309;UBERON:0000489!8.17e-10!32;UBERON:0000922!1.70e-09!612;UBERON:0000475!1.74e-09!365;UBERON:0001871!2.23e-09!7;UBERON:0004733!4.11e-09!12;UBERON:0002028!4.11e-09!12;UBERON:0007277!4.11e-09!12;UBERON:0002420!1.35e-08!9;UBERON:0007245!1.35e-08!9;UBERON:0010009!1.35e-08!9;UBERON:0010011!1.35e-08!9;UBERON:0000454!1.35e-08!9;UBERON:0002308!2.25e-08!9;UBERON:0000125!2.25e-08!9;UBERON:0002113!3.21e-08!27;UBERON:0003918!3.21e-08!27;UBERON:0005095!3.21e-08!27;UBERON:0007687!3.21e-08!27;UBERON:0004732!3.82e-08!13;UBERON:0006555!9.32e-08!17;UBERON:0005103!9.32e-08!17;UBERON:0000083!9.32e-08!17;UBERON:0009201!9.32e-08!17;UBERON:0004819!9.32e-08!17;UBERON:0006553!9.32e-08!17;UBERON:0003074!9.32e-08!17;UBERON:0003060!9.32e-08!17;UBERON:0000200!1.47e-07!6;UBERON:0000468!1.48e-07!659;UBERON:0004211!1.96e-07!16;UBERON:0001285!1.96e-07!16;UBERON:0007684!1.96e-07!16;UBERON:0003220!1.96e-07!16;UBERON:0004208!1.96e-07!16;UBERON:0003887!3.06e-07!21;UBERON:0002050!3.10e-07!605;UBERON:0005423!3.10e-07!605;UBERON:0000080!4.16e-07!18;UBERON:0002120!4.16e-07!18;UBERON:0004875!4.16e-07!18;UBERON:0005721!4.16e-07!18;UBERON:0005754!4.16e-07!18;UBERON:0007297!4.16e-07!18;UBERON:0001894!6.08e-07!7;UBERON:0006222!6.08e-07!7;UBERON:0000923!6.16e-07!604;UBERON:0005291!6.16e-07!604;UBERON:0006598!6.16e-07!604;UBERON:0002532!6.16e-07!604;UBERON:0002680!8.62e-07!9;UBERON:0001895!8.62e-07!9;UBERON:0010092!8.62e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.62e-34;22!UBERON:0001869;2.72e-33;32!UBERON:0003528;1.03e-31;34!UBERON:0002020;1.03e-31;34!UBERON:0001893;1.14e-31;34!UBERON:0001950;3.15e-31;20!UBERON:0002791;5.40e-31;32!UBERON:0002780;5.96e-31;41!UBERON:0001890;5.96e-31;41!UBERON:0000956;5.96e-29;25!UBERON:0000203;5.96e-29;25!UBERON:0000073;1.49e-28;53!UBERON:0002616;1.49e-28;53!UBERON:0000955;2.74e-19;68!UBERON:0001017;3.38e-19;75!UBERON:0001016;7.37e-17;83!UBERON:0000489;5.82e-12;29!UBERON:0001871;3.08e-11;6!UBERON:0002113;1.43e-10;24!UBERON:0011143;1.43e-10;24!UBERON:0000200;5.10e-10;6!UBERON:0011216;5.99e-10;132!UBERON:0007023;7.03e-10;114!UBERON:0006555;9.73e-10;15!UBERON:0004819;9.73e-10;15!UBERON:0001285;9.73e-10;15!UBERON:0007684;9.73e-10;15!UBERON:0002420;1.80e-09;9!UBERON:0007245;1.80e-09;9!UBERON:0010009;1.80e-09;9!UBERON:0010011;1.80e-09;9!UBERON:0000454;1.80e-09;9!UBERON:0000125;3.41e-09;9!UBERON:0002308;3.41e-09;9!UBERON:0004211;3.77e-09;10!UBERON:0009773;3.77e-09;10!UBERON:0001231;3.77e-09;10!UBERON:0004810;3.77e-09;10!UBERON:0004733;4.69e-09;12!UBERON:0002028;4.69e-09;12!UBERON:0002298;7.68e-09;6!UBERON:0002021;8.71e-09;5!UBERON:0001872;1.02e-08;5!UBERON:0005409;1.35e-08;22!UBERON:0000349;2.20e-08;5!UBERON:0004732;3.44e-08;13!UBERON:0000922;3.57e-08;49!UBERON:0002108;1.19e-07;4!UBERON:0006554;1.22e-07;30!UBERON:0001008;1.22e-07;30!UBERON:0000160;2.34e-07;17!UBERON:0001894;3.17e-07;7!UBERON:0001225;7.62e-07;12!UBERON:0008987;7.62e-07;12!UBERON:0009663;7.79e-07;7 | |||
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| ||
|short_description=p1@SYT13 | |||
}} | }} |
Latest revision as of 01:07, 18 September 2015
Short description: | p1@SYT13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYT13_5end |
Coexpression cluster: | C1635_brain_smallcell_occipital_somatostatinoma_temporal_duodenum_small |
Association with transcript: | 0bp_to_ENST00000020926, NM_001247987, NM_020826, uc001myq.2, uc009yku.1_5end |
EntrezGene: | SYT13 |
HGNC: | 14962 |
UniProt: | Q7L8C5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.15e-12 | 17 |
kidney epithelial cell | 2.15e-12 | 17 |
epithelial cell of nephron | 1.07e-09 | 15 |
kidney tubule cell | 4.00e-09 | 10 |
nephron tubule epithelial cell | 4.00e-09 | 10 |
neuron | 1.40e-07 | 6 |
neuroblast | 1.40e-07 | 6 |
electrically signaling cell | 1.40e-07 | 6 |
neuronal stem cell | 1.43e-07 | 8 |
kidney cortical cell | 8.50e-07 | 12 |
renal cortical epithelial cell | 8.50e-07 | 12 |