FFCP PHASE1:Hg19::chr12:115122224..115122233,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:115122224..115122233,- to FFCP PHASE1:Hg19::chr12:115122224..115122233,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6926 | |EntrezGene=6926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11602 | |HGNC=11602 | ||
|TSSclassifier=strong | |||
|UniProt=C9JIZ8,O15119 | |UniProt=C9JIZ8,O15119 | ||
|association_with_transcript=-255bp_to_ENST00000349155,ENST00000361100,NM_005996,NM_016569,uc001tvt.1,uc001tvu.1,uc010syw.1_5end | |||
|cluster_id=chr12:115122224..115122233,- | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_12_at_TBX3_5end | |||
|id=chr12:115122224..115122233,- | |||
|ontology_enrichment_celltype=CL:0002552!4.16e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.18e-12;1!CL:0000333;7.60e-10;5!CL:0002602;9.01e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.11e-12,1;CL:0002602,8.06e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;7.14e-24;2!UBERON:0005754;7.02e-13;1!UBERON:0003124;1.18e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;2.38e-08;6!DOID:4231;9.01e-07;2!DOID:1907;9.01e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.52e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000481!7.35e-08!347;UBERON:0001007!2.00e-07!155;UBERON:0001555!2.00e-07!155;UBERON:0007026!2.00e-07!155;UBERON:0003104!2.87e-07!238;UBERON:0009142!2.87e-07!238;UBERON:0004119!6.06e-07!169;UBERON:0000925!6.06e-07!169;UBERON:0006595!6.06e-07!169;UBERON:0005256!7.85e-07!143;UBERON:0002100!8.51e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.02e-35;3!UBERON:0004054;7.02e-35;3!UBERON:0005904;2.40e-26;4!UBERON:0000998;7.02e-13;1!UBERON:0006868;7.02e-13;1!UBERON:0001000;7.88e-13;1!UBERON:0005352;7.88e-13;1!UBERON:0001301;8.84e-13;1!UBERON:0000996;2.75e-12;1!UBERON:0000058;6.62e-11;10!UBERON:0003135;5.81e-10;11!UBERON:0000013;7.60e-10;5!UBERON:0002410;7.60e-10;5!UBERON:0004175;7.27e-09;21!UBERON:0003101;1.81e-08;22!UBERON:0000079;1.81e-08;22!UBERON:0001255;9.01e-07;2!UBERON:0006444;9.01e-07;2!UBERON:0001995;9.01e-07;2!UBERON:0004715;9.01e-07;2!UBERON:0001556;9.01e-07;2!UBERON:0000077;9.34e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,7.04e-35,3;UBERON:0004054,7.04e-35,3;UBERON:0005904,2.40e-26,4;UBERON:0000998,7.03e-13,1;UBERON:0006868,7.03e-13,1;UBERON:0001000,7.89e-13,1;UBERON:0005352,7.89e-13,1;UBERON:0001301,8.85e-13,1;UBERON:0000996,2.46e-12,1;UBERON:0004175,2.88e-11,25;UBERON:0003135,5.81e-10,11;UBERON:0003064,6.00e-10,28;UBERON:0000013,8.13e-10,5;UBERON:0002410,8.13e-10,5;UBERON:0003101,1.64e-08,22;UBERON:0000079,1.64e-08,22;UBERON:0001008,4.69e-08,48;UBERON:0000162,1.09e-07,14;UBERON:0001353,1.09e-07,14;UBERON:0000163,1.09e-07,14;UBERON:0006866,1.09e-07,14;UBERON:0000164,1.09e-07,14;UBERON:0000931,1.09e-07,14;UBERON:0004122,3.29e-07,15;UBERON:0001255,7.61e-07,2;UBERON:0001556,7.61e-07,2;UBERON:0006444,8.06e-07,2;UBERON:0001995,8.06e-07,2;UBERON:0004715,8.06e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,1.36142988256051,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0.140450806702248,0.816616685019573,0.491337269247072,0.826606249406124,2.37600571456411,0.247266929278557,0,0,1.17835279767846,0.875829639103749,0.277064115484183,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0.207970861530807,0.713715955188647,0.315404830067869,0.468565659970853,0,0,0,0,0,0.781952530212746,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.492762936082855,0,0.348631135379878,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0.096670718292122,0,0,0.275673144969061,0.107420244868274,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0,0.6970372701606,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0.855877976067841,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,0,0,1.22386941009813,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,1.479651084554,0,0,0,0,0,0.260427761085233,0.349839999984783,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.384751292518985,0.113942055847001,0,1.25660702173681,0.217294743844016,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,17.7562981282226,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,3.4945333648406,0,0.290268993867255,0.146178634172371,0.164230914106418,0,0,0,0,0.19871461170299,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0.360299883542404,0,0.709048640765013,0.329663433524666,0.337017719270924,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0.681909645754975,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.427149650270779,0.943225830597996,0.828478110694391,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0.621748802331122,0.295710299979268,0.159296767163702,0,0,0.414706207840855,0,0.521745061811734,0,0,0,0.363697318405119,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10463570151104,0,0,0.127894371303652,2.372145850727,0,1.31051565830417,0,0,0,0,0,0,2.40171224485641,0.352675943690684,0.3062454773532,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,2.48366636455389,0,0,0,0.0657727735628491,0,0,1.72684804271131,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,35.987899266229,0,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0,0.795803100645473,0.237840181555137,0.11294608203896,0,0,0,0.218559560503957,0,0.735444965261716,0,0,0,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0,0,0.103432995861895,0,0.23806443146374,0.129177819672012,0,0,0.25458863311266,0.606351566874658,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,1.33151354837103,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,1.36142988256051,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0.140450806702248,0.816616685019573,0.491337269247072,0.826606249406124,2.37600571456411,0.247266929278557,0,0,1.17835279767846,0.875829639103749,0.277064115484183,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0.207970861530807,0.713715955188647,0.315404830067869,0.468565659970853,0,0,0,0,0,0.781952530212746,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.492762936082855,0,0.348631135379878,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0.096670718292122,0,0,0.275673144969061,0.107420244868274,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0,0.6970372701606,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0.855877976067841,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,0,0,1.22386941009813,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,1.479651084554,0,0,0,0,0,0.260427761085233,0.349839999984783,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.384751292518985,0.113942055847001,0,1.25660702173681,0.217294743844016,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,17.7562981282226,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,3.4945333648406,0,0.290268993867255,0.146178634172371,0.164230914106418,0,0,0,0,0.19871461170299,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0.360299883542404,0,0.709048640765013,0.329663433524666,0.337017719270924,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0.681909645754975,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.427149650270779,0.943225830597996,0.828478110694391,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0.621748802331122,0.295710299979268,0.159296767163702,0,0,0.414706207840855,0,0.521745061811734,0,0,0,0.363697318405119,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10463570151104,0,0,0.127894371303652,2.372145850727,0,1.31051565830417,0,0,0,0,0,0,2.40171224485641,0.352675943690684,0.3062454773532,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,2.48366636455389,0,0,0,0.0657727735628491,0,0,1.72684804271131,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,35.987899266229,0,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0,0.795803100645473,0.237840181555137,0.11294608203896,0,0,0,0.218559560503957,0,0.735444965261716,0,0,0,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0,0,0.103432995861895,0,0.23806443146374,0.129177819672012,0,0,0.25458863311266,0.606351566874658,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,1.33151354837103,0.201273793591026,0 | ||
|short_description=p12@TBX3 | |||
}} | }} |
Latest revision as of 14:39, 16 September 2015
Short description: | p12@TBX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TBX3_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | -255bp_to_ENST00000349155, ENST00000361100, NM_005996, NM_016569, uc001tvt.1, uc001tvu.1, uc010syw.1_5end |
EntrezGene: | TBX3 |
HGNC: | 11602 |
UniProt: | C9JIZ8O15119 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.11e-12 | 1 |
annulus pulposus cell | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 7.04e-35 | 3 |
internal male genitalia | 7.04e-35 | 3 |
duct of male reproductive system | 2.40e-26 | 4 |
seminal vesicle | 7.03e-13 | 1 |
seminal fluid secreting gland | 7.03e-13 | 1 |
vas deferens | 7.89e-13 | 1 |
spermatic cord | 7.89e-13 | 1 |
epididymis | 8.85e-13 | 1 |
vagina | 2.46e-12 | 1 |
internal genitalia | 2.88e-11 | 25 |
male reproductive organ | 5.81e-10 | 11 |
intermediate mesoderm | 6.00e-10 | 28 |
sympathetic nervous system | 8.13e-10 | 5 |
autonomic nervous system | 8.13e-10 | 5 |
male organism | 1.64e-08 | 22 |
male reproductive system | 1.64e-08 | 22 |
renal system | 4.69e-08 | 48 |
cloaca | 1.09e-07 | 14 |
anal region | 1.09e-07 | 14 |
embryonic cloaca | 1.09e-07 | 14 |
terminal part of digestive tract | 1.09e-07 | 14 |
primitive urogenital sinus | 1.09e-07 | 14 |
proctodeum | 1.09e-07 | 14 |
genitourinary system | 3.29e-07 | 15 |
urinary bladder | 7.61e-07 | 2 |
lower urinary tract | 7.61e-07 | 2 |
annulus fibrosus | 8.06e-07 | 2 |
fibrocartilage | 8.06e-07 | 2 |
annulus fibrosus disci intervertebralis | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.52e-08 | 6 |