FFCP PHASE1:Hg19::chr12:13084771..13084773,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:13084771..13084773,+ to FFCP PHASE1:Hg19::chr12:13084771..13084773,+: NSchange) |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:13084771..13084773,+ | |||
|description=CAGE_peak_at_chr12:13084771..13084773,+ | |||
|id=chr12:13084771..13084773,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.91e-15!254;CL:0000223!1.02e-07!59;CL:0000076!3.02e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000319;6.76e-18;1!CL:0000159;1.27e-09;2!CL:0002097;1.27e-09;2!CL:0000174;7.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,7.37e-18,1;CL:0000159,1.33e-09,2;CL:0002097,1.71e-09,2;CL:0000066,5.04e-07,253;CL:0000174,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.27e-09;2!UBERON:0010056;1.27e-09;2 | |||
|ontology_enrichment_disease=DOID:0050687!2.23e-28!143;DOID:305!1.55e-26!106;DOID:162!7.19e-19!235;DOID:14566!1.75e-18!239;DOID:1749!3.71e-09!14;DOID:7!1.88e-08!39;DOID:299!6.91e-08!25;DOID:3119!5.34e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3111;6.76e-18;1!DOID:3030;6.76e-18;1!DOID:3603;6.76e-18;1!DOID:4929;1.27e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,7.37e-18,1;DOID:3111,1.44e-17,1;DOID:3603,1.44e-17,1;DOID:4929,7.98e-10,2;DOID:305,1.99e-09,106;DOID:0050687,8.09e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001007!5.63e-13!155;UBERON:0001555!5.63e-13!155;UBERON:0007026!5.63e-13!155;UBERON:0004119!2.66e-12!169;UBERON:0000925!2.66e-12!169;UBERON:0006595!2.66e-12!169;UBERON:0003929!1.40e-10!54;UBERON:0004921!4.09e-10!129;UBERON:0004185!4.09e-10!129;UBERON:0005911!3.11e-09!82;UBERON:0000077!9.33e-09!130;UBERON:0002530!3.06e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;6.76e-18;1!UBERON:0003703;6.76e-18;1!UBERON:0001174;6.76e-18;1!UBERON:0004914;6.76e-18;1!UBERON:0002394;1.57e-17;4!UBERON:0003928;1.57e-17;4!UBERON:0002423;6.24e-11;25!UBERON:0002294;1.94e-10;7!UBERON:0001173;1.94e-10;7!UBERON:0000058;1.42e-07;10!UBERON:0002369;7.92e-07;3!UBERON:0001723;7.92e-07;3!UBERON:0001235;7.92e-07;3!UBERON:0006858;7.92e-07;3!UBERON:0002114;7.92e-07;2!UBERON:0001033;7.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.66e-18,1;UBERON:0003703,2.66e-18,1;UBERON:0001174,2.66e-18,1;UBERON:0004914,2.66e-18,1;UBERON:0008835,1.76e-12,22;UBERON:0003894,1.76e-12,22;UBERON:0002394,2.91e-12,6;UBERON:0003928,2.91e-12,6;UBERON:0009854,5.94e-12,23;UBERON:0007499,5.07e-11,25;UBERON:0009497,5.07e-11,25;UBERON:0000015,5.07e-11,25;UBERON:0002423,5.07e-11,25;UBERON:0006235,5.07e-11,25;UBERON:0004161,5.07e-11,25;UBERON:0009856,1.31e-10,26;UBERON:0002294,1.77e-08,9;UBERON:0001173,1.77e-08,9;UBERON:0004912,1.77e-08,9;UBERON:0002114,5.80e-07,2;UBERON:0001723,7.28e-07,3;UBERON:0001033,7.28e-07,3;UBERON:0010056,7.28e-07,3;UBERON:0002369,9.64e-07,3;UBERON:0001235,9.64e-07,3;UBERON:0006858,9.64e-07,3 | |||
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| ||
|short_description=p@chr12:13084771..13084773,+ | |||
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Latest revision as of 06:45, 24 July 2015
Short description: | p@chr12:13084771..13084773, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:13084771..13084773, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 7.37e-18 | 1 |
seromucus secreting cell | 1.33e-09 | 2 |
cortical cell of adrenal gland | 1.71e-09 | 2 |
epithelial cell | 5.04e-07 | 253 |
steroid hormone secreting cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.66e-18 | 1 |
extrahepatic bile duct | 2.66e-18 | 1 |
common bile duct | 2.66e-18 | 1 |
duodenal papilla | 2.66e-18 | 1 |
hepatic diverticulum | 1.76e-12 | 22 |
liver primordium | 1.76e-12 | 22 |
bile duct | 2.91e-12 | 6 |
digestive system duct | 2.91e-12 | 6 |
digestive tract diverticulum | 5.94e-12 | 23 |
epithelial sac | 5.07e-11 | 25 |
epithelium of foregut-midgut junction | 5.07e-11 | 25 |
anatomical boundary | 5.07e-11 | 25 |
hepatobiliary system | 5.07e-11 | 25 |
foregut-midgut junction | 5.07e-11 | 25 |
septum transversum | 5.07e-11 | 25 |
sac | 1.31e-10 | 26 |
biliary system | 1.77e-08 | 9 |
biliary tree | 1.77e-08 | 9 |
biliary bud | 1.77e-08 | 9 |
duodenum | 5.80e-07 | 2 |
tongue | 7.28e-07 | 3 |
gustatory system | 7.28e-07 | 3 |
future tongue | 7.28e-07 | 3 |
adrenal gland | 9.64e-07 | 3 |
adrenal cortex | 9.64e-07 | 3 |
adrenal/interrenal gland | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 7.37e-18 | 1 |
cystadenocarcinoma | 1.44e-17 | 1 |
mucinous cystadenocarcinoma | 1.44e-17 | 1 |
tubular adenocarcinoma | 7.98e-10 | 2 |
carcinoma | 1.99e-09 | 106 |
cell type cancer | 8.09e-07 | 143 |