FFCP PHASE1:Hg19::chr12:16760021..16760099,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:16760021..16760099,- to FFCP PHASE1:Hg19::chr12:16760021..16760099,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55885 | |EntrezGene=55885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6643 | |HGNC=6643 | ||
|TSSclassifier=strong | |||
|UniProt=B4DH35 | |UniProt=B4DH35 | ||
|association_with_transcript=0bp_to_ENST00000540445,ENST00000543721,NM_001243613,uc010shz.1_5end | |||
|cluster_id=chr12:16760021..16760099,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_LMO3_5end | |||
|id=chr12:16760021..16760099,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.15e-09;13!CL:0002615;2.26e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.92e-08,15;CL:0002615,2.96e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.45e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.93e-59!115;UBERON:0001017!3.26e-48!82;UBERON:0001049!1.81e-47!57;UBERON:0005068!1.81e-47!57;UBERON:0006241!1.81e-47!57;UBERON:0007135!1.81e-47!57;UBERON:0005743!1.68e-46!86;UBERON:0000073!1.29e-42!94;UBERON:0001016!1.29e-42!94;UBERON:0002616!4.19e-39!59;UBERON:0000955!9.88e-39!69;UBERON:0006238!9.88e-39!69;UBERON:0003080!4.00e-37!42;UBERON:0002780!2.93e-36!41;UBERON:0001890!2.93e-36!41;UBERON:0006240!2.93e-36!41;UBERON:0002346!3.17e-34!90;UBERON:0001893!3.91e-32!34;UBERON:0002020!9.58e-32!34;UBERON:0003528!9.58e-32!34;UBERON:0003075!3.27e-31!86;UBERON:0007284!3.27e-31!86;UBERON:0002791!7.10e-31!33;UBERON:0001869!2.19e-30!32;UBERON:0002619!1.08e-24!22;UBERON:0003056!1.52e-23!61;UBERON:0000924!6.62e-23!173;UBERON:0006601!6.62e-23!173;UBERON:0000956!1.12e-22!25;UBERON:0000203!1.12e-22!25;UBERON:0001950!1.45e-22!20;UBERON:0000153!1.56e-21!129;UBERON:0007811!1.56e-21!129;UBERON:0004121!1.15e-20!169;UBERON:0000033!5.02e-20!123;UBERON:0003076!3.05e-11!15;UBERON:0003057!3.05e-11!15;UBERON:0002420!5.26e-11!9;UBERON:0007245!5.26e-11!9;UBERON:0010009!5.26e-11!9;UBERON:0010011!5.26e-11!9;UBERON:0000454!5.26e-11!9;UBERON:0002308!1.66e-10!9;UBERON:0000125!1.66e-10!9;UBERON:0000475!7.87e-10!365;UBERON:0000468!9.40e-10!659;UBERON:0000922!2.66e-09!612;UBERON:0002298!5.08e-09!8;UBERON:0000025!8.88e-09!194;UBERON:0009663!1.05e-08!7;UBERON:0004733!1.69e-08!12;UBERON:0002028!1.69e-08!12;UBERON:0007277!1.69e-08!12;UBERON:0000200!1.75e-08!6;UBERON:0004111!4.16e-08!241;UBERON:0000923!1.13e-07!604;UBERON:0005291!1.13e-07!604;UBERON:0006598!1.13e-07!604;UBERON:0002532!1.13e-07!604;UBERON:0004732!1.23e-07!13;UBERON:0001871!1.29e-07!7;UBERON:0002050!1.35e-07!605;UBERON:0005423!1.35e-07!605;UBERON:0001872!1.53e-07!5;UBERON:0000349!2.57e-07!5;UBERON:0002021!4.03e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.23e-39;32!UBERON:0002619;1.36e-39;22!UBERON:0001893;4.06e-39;34!UBERON:0003528;2.45e-38;34!UBERON:0002020;2.45e-38;34!UBERON:0002791;9.46e-37;32!UBERON:0001950;8.50e-36;20!UBERON:0000956;3.00e-34;25!UBERON:0000203;3.00e-34;25!UBERON:0002780;1.21e-33;41!UBERON:0001890;1.21e-33;41!UBERON:0000073;1.85e-33;53!UBERON:0002616;1.85e-33;53!UBERON:0001017;6.91e-25;75!UBERON:0000955;3.97e-23;68!UBERON:0001016;1.20e-20;83!UBERON:0007023;6.43e-17;114!UBERON:0000200;1.11e-13;6!UBERON:0004733;2.82e-12;12!UBERON:0002028;2.82e-12;12!UBERON:0002420;4.06e-12;9!UBERON:0007245;4.06e-12;9!UBERON:0010009;4.06e-12;9!UBERON:0010011;4.06e-12;9!UBERON:0000454;4.06e-12;9!UBERON:0001872;4.49e-12;5!UBERON:0002298;5.27e-12;6!UBERON:0000349;9.55e-12;5!UBERON:0002021;2.05e-11;5!UBERON:0000125;2.60e-11;9!UBERON:0002308;2.60e-11;9!UBERON:0004732;3.43e-11;13!UBERON:0000369;1.67e-10;4!UBERON:0002435;1.67e-10;4!UBERON:0000204;1.67e-10;4!UBERON:0009663;2.42e-08;7!UBERON:0005383;3.11e-08;3!UBERON:0005382;3.11e-08;3!UBERON:0001871;3.63e-08;6!UBERON:0001870;9.36e-08;3!UBERON:0011216;1.04e-07;132!UBERON:0002680;1.13e-07;9!UBERON:0001895;1.13e-07;9!UBERON:0000988;6.88e-07;3!UBERON:0001896;9.29e-07;3!UBERON:0005290;9.29e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.56e-64,56;UBERON:0005068,4.56e-64,56;UBERON:0006241,4.56e-64,56;UBERON:0007135,4.56e-64,56;UBERON:0000073,6.52e-59,53;UBERON:0002616,6.52e-59,53;UBERON:0001017,6.92e-59,81;UBERON:0007023,1.22e-55,114;UBERON:0000955,4.58e-53,68;UBERON:0006238,4.58e-53,68;UBERON:0001016,1.34e-51,89;UBERON:0002780,1.70e-47,41;UBERON:0001890,1.70e-47,41;UBERON:0003080,1.70e-47,41;UBERON:0006240,1.70e-47,41;UBERON:0001893,5.64e-45,34;UBERON:0001869,8.19e-45,32;UBERON:0003528,2.34e-44,34;UBERON:0002020,2.34e-44,34;UBERON:0002346,2.76e-41,86;UBERON:0002791,4.15e-41,32;UBERON:0003075,9.45e-40,82;UBERON:0007284,9.45e-40,82;UBERON:0002619,1.32e-39,22;UBERON:0001950,7.54e-36,20;UBERON:0000956,2.92e-34,25;UBERON:0000203,2.92e-34,25;UBERON:0010371,4.00e-30,104;UBERON:0003056,6.68e-29,61;UBERON:0010314,5.35e-25,132;UBERON:0004121,2.11e-23,171;UBERON:0000924,2.11e-23,171;UBERON:0006601,2.11e-23,171;UBERON:0011216,1.09e-21,223;UBERON:0003076,5.47e-17,15;UBERON:0003057,5.47e-17,15;UBERON:0000200,9.36e-14,6;UBERON:0000025,9.64e-14,192;UBERON:0004733,2.96e-12,12;UBERON:0002028,2.96e-12,12;UBERON:0007277,2.96e-12,12;UBERON:0001872,4.21e-12,5;UBERON:0002420,4.21e-12,9;UBERON:0007245,4.21e-12,9;UBERON:0010009,4.21e-12,9;UBERON:0010011,4.21e-12,9;UBERON:0000454,4.21e-12,9;UBERON:0002298,4.82e-12,6;UBERON:0004111,6.14e-12,240;UBERON:0000349,1.05e-11,5;UBERON:0000125,2.11e-11,9;UBERON:0002308,2.11e-11,9;UBERON:0002021,2.29e-11,5;UBERON:0004732,3.58e-11,13;UBERON:0000369,1.58e-10,4;UBERON:0002435,1.58e-10,4;UBERON:0000204,1.58e-10,4;UBERON:0010082,1.58e-10,4;UBERON:0009663,2.50e-08,7;UBERON:0005383,2.97e-08,3;UBERON:0005382,2.97e-08,3;UBERON:0001871,3.10e-08,6;UBERON:0001870,9.69e-08,3;UBERON:0002680,1.03e-07,9;UBERON:0001895,1.03e-07,9;UBERON:0010092,1.03e-07,9;UBERON:0000923,4.90e-07,560;UBERON:0010316,4.90e-07,560;UBERON:0005291,4.90e-07,560;UBERON:0006598,4.90e-07,560;UBERON:0010317,4.90e-07,560;UBERON:0002532,4.90e-07,560;UBERON:0000988,5.03e-07,3;UBERON:0000483,5.55e-07,306;UBERON:0002050,7.52e-07,564;UBERON:0000119,8.52e-07,309 | |||
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| ||
|short_description=p6@LMO3 | |||
}} | }} |
Latest revision as of 16:31, 17 September 2015
Short description: | p6@LMO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LMO3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000540445, ENST00000543721, NM_001243613, uc010shz.1_5end |
EntrezGene: | LMO3 |
HGNC: | 6643 |
UniProt: | B4DH35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.92e-08 | 15 |
adipocyte of omentum tissue | 2.96e-07 | 3 |