FFCP PHASE1:Hg19::chr12:6484376..6484402,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:6484376..6484402,- to FFCP PHASE1:Hg19::chr12:6484376..6484402,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6337 | |EntrezGene=6337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10599 | |HGNC=10599 | ||
|TSSclassifier=strong | |||
|UniProt=E7EVF3,P37088 | |UniProt=E7EVF3,P37088 | ||
|association_with_transcript=0bp_to_ENST00000358945,ENST00000360168,ENST00000542436,ENST00000543585,NM_001159576,uc001qnw.2_5end | |||
|cluster_id=chr12:6484376..6484402,- | |||
|description=CAGE_peak_8_at_SCNN1A_5end | |||
|id=chr12:6484376..6484402,- | |||
|ontology_enrichment_celltype=CL:0000066!4.53e-10!254;CL:0000223!9.10e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000123;6.84e-10;2!CL:0000242;6.84e-10;2!CL:0002195;1.57e-09;2!CL:0002571;1.57e-09;2!CL:0002536;6.11e-09;2!CL:0002602;1.18e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,6.85e-10,2;CL:0002195,1.41e-09,2;CL:0002571,1.41e-09,2;CL:0002536,3.83e-09,2;CL:0002602,8.61e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.99e-11!106;DOID:0050687!4.69e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!6.44e-15!126;UBERON:0005177!8.15e-13!107;UBERON:0004921!6.15e-12!129;UBERON:0004185!6.15e-12!129;UBERON:0001048!7.84e-12!168;UBERON:0000464!1.24e-11!104;UBERON:0000077!1.13e-10!130;UBERON:0000481!1.18e-10!347;UBERON:0001041!4.22e-10!98;UBERON:0004119!4.64e-10!169;UBERON:0000925!4.64e-10!169;UBERON:0006595!4.64e-10!169;UBERON:0001007!9.50e-10!155;UBERON:0001555!9.50e-10!155;UBERON:0007026!9.50e-10!155;UBERON:0005911!6.78e-09!82;UBERON:0003104!1.99e-08!238;UBERON:0009142!1.99e-08!238;UBERON:0000922!2.03e-08!612;UBERON:0000062!1.00e-07!511;UBERON:0003101!1.16e-07!22;UBERON:0000079!1.16e-07!22;UBERON:0003135!1.85e-07!11;UBERON:0005153!1.99e-07!37;UBERON:0002530!2.83e-07!59;UBERON:0005178!3.57e-07!34;UBERON:0002224!3.57e-07!34;UBERON:0000063!3.80e-07!97;UBERON:0002050!4.42e-07!605;UBERON:0005423!4.42e-07!605;UBERON:0005181!7.97e-07!35;UBERON:0000923!9.57e-07!604;UBERON:0005291!9.57e-07!604;UBERON:0006598!9.57e-07!604;UBERON:0002532!9.57e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;6.11e-09;2!UBERON:0003127;1.18e-08;2!UBERON:0006444;1.18e-08;2!UBERON:0001995;1.18e-08;2!UBERON:0004715;1.18e-08;2!UBERON:0011135;8.38e-08;5!UBERON:0002216;8.38e-08;5!UBERON:0011134;8.38e-08;5!UBERON:0002209;8.38e-08;5!UBERON:0002213;8.38e-08;5!UBERON:0007844;8.38e-08;5!UBERON:0011138;8.38e-08;5!UBERON:0001130;8.38e-08;5!UBERON:0001066;8.38e-08;5!UBERON:0001468;8.38e-08;5!UBERON:0006947;5.87e-07;3!UBERON:0004054;5.87e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,6.06e-10,101;UBERON:0000007,5.10e-09,2;UBERON:0000949,8.57e-09,45;UBERON:0006444,8.61e-09,2;UBERON:0001995,8.61e-09,2;UBERON:0004715,8.61e-09,2;UBERON:0003127,1.05e-08,2;UBERON:0011135,6.70e-08,5;UBERON:0002216,6.70e-08,5;UBERON:0011134,6.70e-08,5;UBERON:0002209,6.70e-08,5;UBERON:0002213,6.70e-08,5;UBERON:0005856,6.70e-08,5;UBERON:0005866,6.70e-08,5;UBERON:0005863,6.70e-08,5;UBERON:0007844,6.70e-08,5;UBERON:0011138,6.70e-08,5;UBERON:0001130,6.70e-08,5;UBERON:0001066,6.70e-08,5;UBERON:0001468,6.70e-08,5;UBERON:0006947,5.88e-07,3;UBERON:0004054,5.88e-07,3 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,1.52908960491121,2.90143676051299,1.23766352960047,1.65698687863958,0,0,0,0,0.369363174230364,1.02000345622126,0.313454721478088,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41802225746102,0.443458794925128,0.790513071238134,3.20898734969396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.243947412259191,0.927708378250397,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0,0.337169380156203,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.860919069801795,0.857839051492628,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0.871901815541886,0.766765358330422,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,2.85955987316295,4.34097284313154,0.823240336780769,0,4.26470338491055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78496817704646,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.40101294060657,0.184161977871793,0,0,0.131124414959424,0.902399225814824,0.0770153371044148,0,0,0,0,0,0,0,0.541892875087706,0.501689773854853,1.01950509218015,0,0.447749509444357,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0.515205058238611,0,0,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0.192444225451024,1.34060455107157,0,0.847294206991012,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32237948940793,0.398495976502139,0,0,0.306806047506464,0,0,0,0.358042349351218,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0.682760689712998,2.79679015322043,0.236387681767936,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.816164040795739,0,0.216388639742091,0,0,0,0,0,0,0.67401132980677,0,0,0,0.391329237864179,2.67058417487502,7.89168805698781,0,0,0.568679216656392,0,0,0,0,0,1.19472429772959,1.13843818411917,0.138674673013139,0.694238953340524,0.391969589657511,0,0.17472666824203,0,0,0,0,0.290967049465258,0.529536760149002,0.225980740780532,0,0,0,0.586654148204409,0,0.213452994739353,0.19980960958213,0.72045208577053,0,0,0,0,0.707082103850386,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.945398187686684,0.659326867049332,0.539228350833479,0.196854963029498,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0,0,5.27998238904628,3.77673034571986,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0.679872549120754,0.439656701034247,0,0,0,0,3.52407511158336,1.28144895081234,0,1.24271716604159,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0,2.29363678276028,3.66065870071613,0.620964029413834,0,0,0,0,0,4.68334905806882,5.07223600137888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0.219284049578707,0,0.192914038270915,1.8583668471838,0,0,0.607719912354764,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.198916222116275,2.40673050717623,0,2.34454203369928,0,0,0.887136517302272,0,0,0,0,0,1.09651553371436,0.496211178389294,0,0.255524855279191,0.535701835878287,0,1.21393120847326,2.95960848756687,0,0,0.514464028312255,0.0679697329768317,0,0.354581522651905,0,0.313972371402056,0,0.280272163313789,0,0,0,3.85973338553944,0,3.13851848493938,0,0,0,0,0,3.8720462293825,0,0,9.31451510420044,2.2910686854405,0,0,0.671132590786754,0.196300467230486,0.243835849964539,0,0,0,0,2.10545517115895,0,0,0.33883824611688,0,0.301925687133347,0,0,0.470317296361523,0,1.17838273550813,0,0,0,0,0,0,0,0.535661815816973,0,0.481448200135009,0,0.917458566809082,0.143339583151451,0,0.135982980381829,0,0.5290268405154,0,0.462175628631418,0,0,0,0.380095503034311,0.713921808193872,0,0.275684698604535,0.752122617877125,0.530450887527676,0.803892390468535,0,0,0,0,0,0,0,6.30106866953833,3.63810940124795,0,0.342233301085281,0.336760265072938,1.2192774916755,1.33064142618405,0.325613074443898,0.213454691755431,0,2.69475606319761,0,0.366724332548599,0.813792356631477,0,0.201273793591026,0 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| ||
|short_description=p8@SCNN1A | |||
}} | }} |
Latest revision as of 20:42, 19 September 2015
Short description: | p8@SCNN1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SCNN1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000358945, ENST00000360168, ENST00000542436, ENST00000543585, NM_001159576, uc001qnw.2_5end |
EntrezGene: | SCNN1A |
HGNC: | 10599 |
UniProt: | E7EVF3P37088 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 6.85e-10 | 2 |
hepatic stem cell | 1.41e-09 | 2 |
hepatic mesenchymal stem cell | 1.41e-09 | 2 |
amniotic epithelial cell | 3.83e-09 | 2 |
annulus pulposus cell | 8.61e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 6.06e-10 | 101 |
pituitary gland | 5.10e-09 | 2 |
endocrine system | 8.57e-09 | 45 |
annulus fibrosus | 8.61e-09 | 2 |
fibrocartilage | 8.61e-09 | 2 |
annulus fibrosus disci intervertebralis | 8.61e-09 | 2 |
open tracheal system trachea | 1.05e-08 | 2 |
intervertebral cartilage | 6.70e-08 | 5 |
symphysis | 6.70e-08 | 5 |
nonsynovial joint | 6.70e-08 | 5 |
fibrous joint | 6.70e-08 | 5 |
cartilaginous joint | 6.70e-08 | 5 |
developing mesenchymal condensation | 6.70e-08 | 5 |
pre-cartilage condensation | 6.70e-08 | 5 |
cartilaginous condensation | 6.70e-08 | 5 |
cartilage element | 6.70e-08 | 5 |
post-cranial axial skeletal system | 6.70e-08 | 5 |
vertebral column | 6.70e-08 | 5 |
intervertebral disk | 6.70e-08 | 5 |
intervertebral joint | 6.70e-08 | 5 |
male genital duct | 5.88e-07 | 3 |
internal male genitalia | 5.88e-07 | 3 |