FFCP PHASE1:Hg19::chr13:37006398..37006417,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:37006398..37006417,+ to FFCP PHASE1:Hg19::chr13:37006398..37006417,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8900 | |EntrezGene=8900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1577 | |HGNC=1577 | ||
|TSSclassifier=strong | |||
|UniProt=P78396 | |UniProt=P78396 | ||
|association_with_transcript=0bp_to_ENST00000418263,NM_001111045,NM_003914,uc001uvr.3,uc001uvs.3,uc010abr.2_5end | |||
|cluster_id=chr13:37006398..37006417,+ | |||
|coexpression_cluster_id=C779 | |||
|description=CAGE_peak_5_at_CCNA1_5end | |||
|id=chr13:37006398..37006417,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.16e-48!57;UBERON:0005068!1.16e-48!57;UBERON:0006241!1.16e-48!57;UBERON:0007135!1.16e-48!57;UBERON:0002020!3.03e-46!34;UBERON:0003528!3.03e-46!34;UBERON:0001893!3.09e-46!34;UBERON:0002780!3.74e-46!41;UBERON:0001890!3.74e-46!41;UBERON:0006240!3.74e-46!41;UBERON:0001869!5.08e-46!32;UBERON:0003080!7.31e-45!42;UBERON:0002791!4.17e-44!33;UBERON:0002616!5.05e-44!59;UBERON:0000073!2.57e-43!94;UBERON:0001016!2.57e-43!94;UBERON:0001017!5.41e-43!82;UBERON:0005743!1.05e-42!86;UBERON:0000956!1.63e-42!25;UBERON:0000203!1.63e-42!25;UBERON:0000955!1.94e-40!69;UBERON:0006238!1.94e-40!69;UBERON:0002619!2.50e-40!22;UBERON:0003075!1.78e-38!86;UBERON:0007284!1.78e-38!86;UBERON:0002346!2.77e-38!90;UBERON:0003056!4.57e-37!61;UBERON:0001950!9.34e-36!20;UBERON:0000033!8.98e-25!123;UBERON:0000924!9.84e-25!173;UBERON:0006601!9.84e-25!173;UBERON:0004121!2.25e-24!169;UBERON:0007023!2.98e-23!115;UBERON:0000153!4.41e-23!129;UBERON:0007811!4.41e-23!129;UBERON:0000200!5.99e-15!6;UBERON:0000025!9.85e-15!194;UBERON:0004111!2.25e-12!241;UBERON:0001872!2.46e-12!5;UBERON:0001871!1.79e-11!7;UBERON:0000477!5.27e-11!286;UBERON:0000119!8.68e-11!312;UBERON:0000483!1.99e-10!309;UBERON:0002021!9.00e-09!5;UBERON:0000349!1.25e-08!5;UBERON:0002771!1.52e-08!3;UBERON:0000988!1.26e-07!3;UBERON:0002298!3.15e-07!8;UBERON:0000064!3.76e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.96e-48;22!UBERON:0002791;2.60e-44;32!UBERON:0001950;1.30e-43;20!UBERON:0001869;7.49e-43;32!UBERON:0000956;2.57e-42;25!UBERON:0000203;2.57e-42;25!UBERON:0001893;3.16e-37;34!UBERON:0003528;5.38e-36;34!UBERON:0002020;5.38e-36;34!UBERON:0002780;9.85e-26;41!UBERON:0001890;9.85e-26;41!UBERON:0002702;3.84e-20;2!UBERON:0002021;8.33e-18;5!UBERON:0000073;2.51e-17;53!UBERON:0002616;2.51e-17;53!UBERON:0000955;1.12e-15;68!UBERON:0000200;7.04e-15;6!UBERON:0001017;2.13e-14;75!UBERON:0001870;9.28e-14;3!UBERON:0005383;1.70e-13;3!UBERON:0005382;1.70e-13;3!UBERON:0001871;7.76e-13;6!UBERON:0002902;9.49e-11;1!UBERON:0001874;9.49e-11;1!UBERON:0003112;9.49e-11;1!UBERON:0011158;9.49e-11;1!UBERON:0009899;9.49e-11;1!UBERON:0003128;9.49e-11;1!UBERON:0001703;9.49e-11;1!UBERON:0002241;9.49e-11;1!UBERON:0000369;2.36e-10;4!UBERON:0002435;2.36e-10;4!UBERON:0000204;2.36e-10;4!UBERON:0002420;4.18e-10;9!UBERON:0007245;4.18e-10;9!UBERON:0010009;4.18e-10;9!UBERON:0010011;4.18e-10;9!UBERON:0000454;4.18e-10;9!UBERON:0001016;6.74e-10;83!UBERON:0000349;1.29e-08;5!UBERON:0001872;1.86e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,5.46e-48,22;UBERON:0002791,4.02e-46,32;UBERON:0001869,4.02e-46,32;UBERON:0001950,1.68e-43,20;UBERON:0003528,2.22e-43,34;UBERON:0002020,2.22e-43,34;UBERON:0001893,2.22e-43,34;UBERON:0000956,2.80e-42,25;UBERON:0000203,2.80e-42,25;UBERON:0002780,7.86e-36,41;UBERON:0001890,7.86e-36,41;UBERON:0003080,7.86e-36,41;UBERON:0006240,7.86e-36,41;UBERON:0000073,1.95e-27,53;UBERON:0002616,1.95e-27,53;UBERON:0001049,6.90e-26,56;UBERON:0005068,6.90e-26,56;UBERON:0006241,6.90e-26,56;UBERON:0007135,6.90e-26,56;UBERON:0000955,3.29e-24,68;UBERON:0006238,3.29e-24,68;UBERON:0003056,1.22e-23,61;UBERON:0001017,3.45e-23,81;UBERON:0001016,1.08e-20,89;UBERON:0002702,3.02e-20,2;UBERON:0002021,9.91e-18,5;UBERON:0003075,3.80e-17,82;UBERON:0007284,3.80e-17,82;UBERON:0002346,2.90e-16,86;UBERON:0000200,6.73e-15,6;UBERON:0001870,7.92e-14,3;UBERON:0005383,2.34e-13,3;UBERON:0005382,2.34e-13,3;UBERON:0010371,4.02e-13,104;UBERON:0001871,6.34e-13,6;UBERON:0007023,5.81e-12,114;UBERON:0010314,1.12e-11,132;UBERON:0003112,6.14e-11,1;UBERON:0011158,6.14e-11,1;UBERON:0003128,6.14e-11,1;UBERON:0001703,6.14e-11,1;UBERON:0002241,6.14e-11,1;UBERON:0004761,6.14e-11,1;UBERON:0009617,6.14e-11,1;UBERON:0001874,9.97e-11,1;UBERON:0002902,1.61e-10,1;UBERON:0009899,1.61e-10,1;UBERON:0000369,2.99e-10,4;UBERON:0002435,2.99e-10,4;UBERON:0000204,2.99e-10,4;UBERON:0010082,2.99e-10,4;UBERON:0002420,4.74e-10,9;UBERON:0007245,4.74e-10,9;UBERON:0010009,4.74e-10,9;UBERON:0010011,4.74e-10,9;UBERON:0000454,4.74e-10,9;UBERON:0004121,8.36e-10,171;UBERON:0000924,8.36e-10,171;UBERON:0006601,8.36e-10,171;UBERON:0011216,2.18e-09,223;UBERON:0000349,1.09e-08,5;UBERON:0001872,2.70e-08,5 | |||
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| ||
|short_description=p5@CCNA1 | |||
}} | }} |
Latest revision as of 06:03, 17 September 2015
Short description: | p5@CCNA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCNA1_5end |
Coexpression cluster: | C779_testis_medial_occipital_brain_temporal_postcentral_insula |
Association with transcript: | 0bp_to_ENST00000418263, NM_001111045, NM_003914, uc001uvr.3, uc001uvs.3, uc010abr.2_5end |
EntrezGene: | CCNA1 |
HGNC: | 1577 |
UniProt: | P78396 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data