FFCP PHASE1:Hg19::chr13:76334798..76334809,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:76334798..76334809,+ to FFCP PHASE1:Hg19::chr13:76334798..76334809,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4008 | |EntrezGene=4008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |HGNC=6646 | ||
|TSSclassifier=strong | |||
|UniProt=E9PLH4,Q8WWI1 | |UniProt=E9PLH4,Q8WWI1 | ||
|association_with_transcript=1bp_to_ENST00000465261,NM_015842,uc001vjv.2_5end | |||
|cluster_id=chr13:76334798..76334809,+ | |||
|coexpression_cluster_id=C3384 | |||
|description=CAGE_peak_20_at_LMO7_5end | |||
|id=chr13:76334798..76334809,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.25e-09!254;CL:0002076!9.30e-08!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.37e-23;29!UBERON:0006595;1.08e-07;86!UBERON:0010122;3.23e-07;2!UBERON:0001041;6.13e-07;30 | |||
|ontology_enrichment_disease=DOID:305!2.12e-17!106;DOID:0050687!1.40e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.79e-13,106;DOID:0050687,1.10e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000065!1.13e-20!53;UBERON:0008947!1.31e-16!38;UBERON:0003258!1.31e-16!38;UBERON:0001004!2.20e-16!72;UBERON:0007023!4.37e-16!115;UBERON:0004119!5.92e-16!169;UBERON:0000925!5.92e-16!169;UBERON:0006595!5.92e-16!169;UBERON:0000077!1.28e-15!130;UBERON:0000072!2.18e-15!46;UBERON:0001007!2.44e-15!155;UBERON:0001555!2.44e-15!155;UBERON:0007026!2.44e-15!155;UBERON:0004921!2.53e-15!129;UBERON:0004185!2.53e-15!129;UBERON:0001041!3.19e-13!98;UBERON:0005911!9.09e-12!82;UBERON:0005153!1.54e-11!37;UBERON:0000064!1.72e-11!219;UBERON:0001869!2.94e-11!32;UBERON:0002780!5.54e-11!41;UBERON:0001890!5.54e-11!41;UBERON:0006240!5.54e-11!41;UBERON:0001557!7.79e-11!19;UBERON:0003080!1.56e-10!42;UBERON:0001893!3.36e-10!34;UBERON:0001737!1.13e-09!9;UBERON:0002791!1.22e-09!33;UBERON:0000481!1.33e-09!347;UBERON:0005157!1.74e-09!51;UBERON:0002619!3.09e-09!22;UBERON:0002020!3.59e-09!34;UBERON:0003528!3.59e-09!34;UBERON:0000477!4.71e-09!286;UBERON:0000062!1.38e-08!511;UBERON:0005178!1.65e-08!34;UBERON:0002224!1.65e-08!34;UBERON:0002048!2.67e-08!22;UBERON:0000117!2.67e-08!22;UBERON:0000171!2.67e-08!22;UBERON:0000170!2.67e-08!22;UBERON:0005597!2.67e-08!22;UBERON:0000118!2.67e-08!22;UBERON:0005181!4.34e-08!35;UBERON:0001950!8.05e-08!20;UBERON:0004111!1.17e-07!241;UBERON:0000956!1.35e-07!25;UBERON:0000203!1.35e-07!25;UBERON:0001049!6.92e-07!57;UBERON:0005068!6.92e-07!57;UBERON:0006241!6.92e-07!57;UBERON:0007135!6.92e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.87e-15;9!UBERON:0001557;3.87e-15;9!UBERON:0000065;3.59e-14;44!UBERON:0000369;9.06e-13;4!UBERON:0002435;9.06e-13;4!UBERON:0000204;9.06e-13;4!UBERON:0000072;4.07e-11;37!UBERON:0005383;3.41e-10;3!UBERON:0005382;3.41e-10;3!UBERON:0005178;5.46e-08;34!UBERON:0002224;5.46e-08;34!UBERON:0001004;6.35e-08;65!UBERON:0003127;1.31e-07;2!UBERON:0002394;1.51e-07;4!UBERON:0003928;1.51e-07;4!UBERON:0002294;1.85e-07;7!UBERON:0001173;1.85e-07;7!UBERON:0009663;2.69e-07;7!UBERON:0001873;3.23e-07;2!UBERON:0006562;3.23e-07;2!UBERON:0005181;4.00e-07;35!UBERON:0002370;7.74e-07;2!UBERON:0005058;7.74e-07;2!UBERON:0009113;7.74e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.77e-23,54;UBERON:0001557,4.53e-19,19;UBERON:0008947,4.91e-19,38;UBERON:0003258,4.91e-19,38;UBERON:0001041,3.20e-18,87;UBERON:0000072,6.56e-18,47;UBERON:0001004,3.14e-17,74;UBERON:0004921,4.39e-15,118;UBERON:0001737,1.25e-14,9;UBERON:0000369,4.52e-13,4;UBERON:0002435,4.52e-13,4;UBERON:0000204,4.52e-13,4;UBERON:0010082,4.52e-13,4;UBERON:0001007,5.37e-12,145;UBERON:0001555,5.37e-12,145;UBERON:0007026,5.37e-12,145;UBERON:0004119,4.51e-11,160;UBERON:0000925,4.51e-11,160;UBERON:0006595,4.51e-11,160;UBERON:0005383,3.05e-10,3;UBERON:0005382,3.05e-10,3;UBERON:0005178,3.40e-09,34;UBERON:0002224,3.40e-09,34;UBERON:0006562,4.99e-09,11;UBERON:0011216,5.32e-09,223;UBERON:0005181,7.29e-09,35;UBERON:0003127,1.20e-07,2;UBERON:0009663,1.84e-07,7;UBERON:0001873,2.34e-07,2;UBERON:0010122,2.34e-07,2;UBERON:0001042,4.91e-07,10;UBERON:0009145,4.91e-07,10;UBERON:0001048,5.37e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983548850569165,0.393010762749165,0,0,0.32592226663359,0.473447805734733,0,0,0,0,0.270803863765016,0,0,0,0,0.869409257205157,1.33457906845854,2.40786745280742,0,0.226618685395132,0,0,0,0,0,0,0.451725357233318,0.895906278080929,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0,0,0.386521706326594,0,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,1.18306800039844,1.01150814046861,0.723033089650446,1.10293972732394,1.30727666455444,0.71181185733329,1.34831308160164,1.37355025587742,1.53898862778556,0,0,0.4115740113314,0,1.26755034821831,0,0,0,0.245976877086227,0,0.329250856225877,0,0,0.555530670951178,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0.358234090811393,0.581267877027924,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0,0,0,0.413536052245775,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0.200506470303285,2.30202472339741,0.34444334449382,0,0,0.451199612907412,0.308061348417659,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32227932288782,0.192190067365106,0.255225424989168,0.809262246844399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,1.08890984861323,0.470719003883896,0,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.68484557265532,1.48482340416319,5.22173193568695,0.994147647766298,0.422008249231538,0,0,0,0.796991953004279,0,0.503865495708552,0,0.123084805461069,0,1.16828856491525,1.25314822272926,0,0.197286811273867,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0.568967241427498,3.30529745380596,0.709163045303809,0,0,0,2.65722415744152,1.5677537021303,0,0,0,0,0.21787692703798,1.95193241990045,0.384751292518985,0,0,0,0,1.91400695839152,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,1.1713222286267,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694238953340524,1.56787835863004,0.0870592065804026,0,0,1.45134496933628,2.11959019549938,0.903270027585302,3.9765496760252,0.0882561266915003,0.451961481561065,0,0,0.189932387867636,4.30213042016567,0.64127056201227,0.426905989478705,0,0.144090417154106,0,0,1.7286575758578,0.372757606696298,3.53541051925193,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,1.14580212005842,0,0.798716001995964,0.429226048136571,0.89268582976749,0.940568614814168,0,0,0.0787831823072236,0,0,0,0,0.795229689809303,0.953423842781029,0,0,0,0,0.77380195455795,0.668245123238271,0,0.157611414598396,0.157363764404994,0.844802692155252,0.179287339332845,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0.513260513652988,2.81926008926669,5.33937062838473,6.9169894243853,2.07119527673598,0,0,0,0.638341257770182,0,0,0,0,2.51286554000375,0,0.854183854313742,0.625954653532499,0,0,0,0,0,0,0,1.88212655758537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829412415681711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,1.23520578864389,0.219284049578707,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,2.74705760366215,0,0,0,0,0,1.39879507719444,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,1.92687675289379,1.41696576325585,0.159633859057151,0,0.504143392443436,0.345786262321089,0.161475645631851,0,0,0.589848616738702,0,0.577628330751691,0,0,0,0.0752103283492573,0,0,0,0,3.40068998299204,0.472763092328763,1.56215619722769,0.206686796501184,0.443910671357348,0,0,0.496211178389294,0,1.66091155931474,0,0,0,0.227662191351298,0,0,0.171488009437418,0.0679697329768317,0.263091094251396,1.65471377237555,0.778619813244484,0.627944742804112,2.04250266890802,0.280272163313789,0,0.215927591218621,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,2.97838929107265,0,0,0,0.98150233615243,0,0,1.64260490969995,0,0.485710993059139,0,1.79055697645231,0,1.35535298446752,0,0.452888530700021,0.0771741581079447,0,1.88126918544609,0,0,0.196308467114945,0,0,0,0.187967835959707,0,0,0.357107877211315,0.705789743431384,1.84555143385087,0.730336388246517,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.20686599172379,3.19850972851471,0.23806443146374,1.55013383606415,1.11734485732544,0,0.509177266225319,0.808468755832877,1.08858373948481,1.0266999032558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| ||
|short_description=p20@LMO7 | |||
}} | }} |
Latest revision as of 00:10, 18 September 2015
Short description: | p20@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_LMO7_5end |
Coexpression cluster: | C3384_lung_amniotic_signet_papillotubular_prostate_gall_Hepatocyte |
Association with transcript: | 1bp_to_ENST00000465261, NM_015842, uc001vjv.2_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | E9PLH4Q8WWI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory tract | 1.77e-23 | 54 |
upper respiratory tract | 4.53e-19 | 19 |
respiratory primordium | 4.91e-19 | 38 |
endoderm of foregut | 4.91e-19 | 38 |
foregut | 3.20e-18 | 87 |
segment of respiratory tract | 6.56e-18 | 47 |
respiratory system | 3.14e-17 | 74 |
subdivision of digestive tract | 4.39e-15 | 118 |
larynx | 1.25e-14 | 9 |
corpus striatum | 4.52e-13 | 4 |
striatum | 4.52e-13 | 4 |
ventral part of telencephalon | 4.52e-13 | 4 |
future corpus striatum | 4.52e-13 | 4 |
digestive system | 5.37e-12 | 145 |
digestive tract | 5.37e-12 | 145 |
primitive gut | 5.37e-12 | 145 |
endoderm-derived structure | 4.51e-11 | 160 |
endoderm | 4.51e-11 | 160 |
presumptive endoderm | 4.51e-11 | 160 |
caudate-putamen | 3.05e-10 | 3 |
dorsal striatum | 3.05e-10 | 3 |
thoracic cavity element | 3.40e-09 | 34 |
thoracic cavity | 3.40e-09 | 34 |
pharynx | 4.99e-09 | 11 |
organ system subdivision | 5.32e-09 | 223 |
thoracic segment organ | 7.29e-09 | 35 |
open tracheal system trachea | 1.20e-07 | 2 |
telencephalic nucleus | 1.84e-07 | 7 |
caudate nucleus | 2.34e-07 | 2 |
future caudate nucleus | 2.34e-07 | 2 |
chordate pharynx | 4.91e-07 | 10 |
pharyngeal region of foregut | 4.91e-07 | 10 |
primordium | 5.37e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.79e-13 | 106 |
cell type cancer | 1.10e-08 | 143 |