FFCP PHASE1:Hg19::chr14:23451816..23451828,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:23451816..23451828,- to FFCP PHASE1:Hg19::chr14:23451816..23451828,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84962 | |EntrezGene=84962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20250 | |HGNC=20250 | ||
|TSSclassifier=strong | |||
|UniProt=Q96IF1 | |UniProt=Q96IF1 | ||
|association_with_transcript=19bp_to_NM_032876,uc001whz.2_5end | |||
|cluster_id=chr14:23451816..23451828,- | |||
|coexpression_cluster_id=C1716 | |||
|description=CAGE_peak_5_at_AJUBA_5end | |||
|id=chr14:23451816..23451828,- | |||
|ontology_enrichment_celltype=CL:0000066!2.80e-49!254;CL:0002321!9.25e-26!248;CL:0000220!1.33e-25!246;CL:0000076!2.37e-14!62;CL:0000223!6.55e-14!59;CL:0002076!1.52e-13!43;CL:0000548!3.82e-13!679;CL:0000004!3.82e-13!679;CL:0000255!3.82e-13!679;CL:0000012!2.47e-12!682;CL:0002251!4.39e-09!21;CL:0000222!1.72e-08!119;CL:0000213!8.90e-08!57;CL:0000215!8.90e-08!57;CL:0000063!1.62e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002076;8.38e-12;42!CL:0002251;1.55e-10;20!CL:1000449;6.47e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.04e-47,253;CL:0002321,8.71e-20,250;CL:0002076,4.56e-15,42;CL:0000223,1.28e-14,58;CL:0000076,1.93e-12,63;CL:0002251,3.65e-10,20;CL:0000213,4.51e-07,58;CL:0000215,4.51e-07,58;CL:1000449,5.76e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000223;2.00e-08;58 | |||
|ontology_enrichment_disease=DOID:305!3.80e-13!106;DOID:0050687!1.14e-12!143;DOID:7!2.05e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.13e-12,106;DOID:0050687,5.77e-10,143;DOID:7,3.16e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.11e-14!169;UBERON:0000925!1.11e-14!169;UBERON:0006595!1.11e-14!169;UBERON:0003104!1.19e-14!238;UBERON:0009142!1.19e-14!238;UBERON:0002100!2.36e-11!216;UBERON:0000481!6.92e-11!347;UBERON:0003102!1.28e-10!95;UBERON:0005256!2.00e-10!143;UBERON:0000475!3.05e-10!365;UBERON:0001007!5.36e-10!155;UBERON:0001555!5.36e-10!155;UBERON:0007026!5.36e-10!155;UBERON:0000119!1.00e-09!312;UBERON:0006554!1.27e-09!44;UBERON:0000483!1.87e-09!309;UBERON:0001008!1.91e-09!45;UBERON:0000077!2.76e-09!130;UBERON:0000490!3.99e-09!138;UBERON:0005911!4.81e-09!82;UBERON:0003914!1.39e-08!118;UBERON:0005085!1.53e-08!29;UBERON:0000468!3.84e-08!659;UBERON:0003064!6.61e-08!37;UBERON:0003929!1.02e-07!54;UBERON:0001048!2.30e-07!168;UBERON:0001444!2.69e-07!48;UBERON:0004921!2.76e-07!129;UBERON:0004185!2.76e-07!129;UBERON:0009569!4.27e-07!113;UBERON:0000477!8.84e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;5.63e-08;30!UBERON:0001008;5.63e-08;30!UBERON:0006555;6.47e-07;15!UBERON:0004819;6.47e-07;15!UBERON:0001285;6.47e-07;15!UBERON:0007684;6.47e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.52e-14,160;UBERON:0000925,3.52e-14,160;UBERON:0006595,3.52e-14,160;UBERON:0006554,1.62e-12,47;UBERON:0001008,5.90e-12,48;UBERON:0003102,3.71e-10,99;UBERON:0005085,2.05e-09,31;UBERON:0001007,7.69e-09,145;UBERON:0001555,7.69e-09,145;UBERON:0007026,7.69e-09,145;UBERON:0005911,3.24e-08,82;UBERON:0000119,1.11e-07,309;UBERON:0000033,1.23e-07,56;UBERON:0000483,1.73e-07,306;UBERON:0001444,1.91e-07,49;UBERON:0003929,5.61e-07,54;UBERON:0004211,5.76e-07,15;UBERON:0009773,5.76e-07,15;UBERON:0001231,5.76e-07,15;UBERON:0001285,5.76e-07,15;UBERON:0007684,5.76e-07,15;UBERON:0004208,5.76e-07,15 | |||
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| ||
|short_description=p5@AJUBA | |||
}} | }} |
Latest revision as of 08:32, 19 September 2015
Short description: | p5@AJUBA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AJUBA_5end |
Coexpression cluster: | C1716_Corneal_oral_Keratinocyte_mesothelioma_Esophageal_Urothelial_anaplastic |
Association with transcript: | 19bp_to_NM_032876, uc001whz.2_5end |
EntrezGene: | AJUBA |
HGNC: | 20250 |
UniProt: | Q96IF1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.04e-47 | 253 |
embryonic cell | 8.71e-20 | 250 |
endo-epithelial cell | 4.56e-15 | 42 |
endodermal cell | 1.28e-14 | 58 |
squamous epithelial cell | 1.93e-12 | 63 |
epithelial cell of alimentary canal | 3.65e-10 | 20 |
lining cell | 4.51e-07 | 58 |
barrier cell | 4.51e-07 | 58 |
epithelial cell of nephron | 5.76e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.52e-14 | 160 |
endoderm | 3.52e-14 | 160 |
presumptive endoderm | 3.52e-14 | 160 |
urinary system structure | 1.62e-12 | 47 |
renal system | 5.90e-12 | 48 |
surface structure | 3.71e-10 | 99 |
ectodermal placode | 2.05e-09 | 31 |
digestive system | 7.69e-09 | 145 |
digestive tract | 7.69e-09 | 145 |
primitive gut | 7.69e-09 | 145 |
endo-epithelium | 3.24e-08 | 82 |
cell layer | 1.11e-07 | 309 |
head | 1.23e-07 | 56 |
epithelium | 1.73e-07 | 306 |
subdivision of head | 1.91e-07 | 49 |
gut epithelium | 5.61e-07 | 54 |
nephron epithelium | 5.76e-07 | 15 |
renal tubule | 5.76e-07 | 15 |
nephron tubule | 5.76e-07 | 15 |
nephron | 5.76e-07 | 15 |
uriniferous tubule | 5.76e-07 | 15 |
nephrogenic mesenchyme | 5.76e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.13e-12 | 106 |
cell type cancer | 5.77e-10 | 143 |
disease of anatomical entity | 3.16e-07 | 39 |