FFCP PHASE1:Hg19::chr14:45251956..45251976,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:45251956..45251976,- to FFCP PHASE1:Hg19::chr14:45251956..45251976,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=55bp_to_ENST00000556405_5end | |||
|cluster_id=chr14:45251956..45251976,- | |||
|coexpression_cluster_id=C231 | |||
|description=CAGE_peak_1_at_ENST00000556405_5end | |||
|id=chr14:45251956..45251976,- | |||
|ontology_enrichment_celltype=CL:0000359!3.07e-37!32;CL:0000192!7.09e-27!42;CL:0000514!7.09e-27!42;CL:0000187!9.83e-24!54;CL:0002494!1.15e-22!16;CL:0000680!3.93e-22!57;CL:0000056!3.93e-22!57;CL:0000355!3.93e-22!57;CL:0000183!3.72e-21!59;CL:0000393!1.08e-20!60;CL:0000211!1.08e-20!60;CL:0002539!2.64e-17!10;CL:0000222!5.89e-16!119;CL:0000055!6.15e-15!180;CL:1000306!4.06e-12!4;CL:0002547!4.06e-12!4;CL:0002548!2.88e-11!6;CL:0002592!9.75e-10!3;CL:0002595!4.26e-09!5;CL:0000077!1.02e-08!19;CL:0000220!3.17e-07!246;CL:0002321!4.26e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002592;3.11e-21;3!CL:0000359;5.41e-19;32!CL:1000306;2.20e-16;4!CL:0002547;2.20e-16;4!CL:0000077;4.01e-13;19!CL:0002539;4.85e-11;10!CL:0000192;1.07e-10;43!CL:0002494;1.36e-10;16!CL:0002557;2.99e-08;1!CL:0002591;5.24e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,2.71e-21,3;CL:0000359,1.29e-19,32;CL:1000306,2.51e-16,4;CL:0002547,2.51e-16,4;CL:0000192,3.55e-14,43;CL:0000514,3.55e-14,43;CL:0000077,3.84e-13,19;CL:0000222,1.49e-11,121;CL:0002539,4.54e-11,10;CL:0000187,1.01e-10,55;CL:0002494,1.38e-10,16;CL:0000680,4.40e-10,58;CL:0000056,4.40e-10,58;CL:0000355,4.40e-10,58;CL:0000393,1.66e-09,61;CL:0000211,1.66e-09,61;CL:0002557,2.69e-08,1;CL:0002591,6.68e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000514;1.07e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;2.02e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.17e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.63e-42!42;UBERON:0003509!1.63e-42!42;UBERON:0004572!1.63e-42!42;UBERON:0004573!1.69e-36!33;UBERON:0004571!1.69e-36!33;UBERON:0004872!5.34e-34!84;UBERON:0001981!2.02e-27!60;UBERON:0007500!2.02e-27!60;UBERON:0004537!2.02e-27!60;UBERON:0006965!2.02e-27!60;UBERON:0004535!4.29e-25!110;UBERON:0001009!3.69e-24!113;UBERON:0000055!7.54e-23!69;UBERON:0003914!9.59e-23!118;UBERON:0002049!1.51e-20!79;UBERON:0007798!1.51e-20!79;UBERON:0001134!3.03e-20!61;UBERON:0002036!3.03e-20!61;UBERON:0003082!3.03e-20!61;UBERON:0000948!9.47e-20!24;UBERON:0005498!9.47e-20!24;UBERON:0004140!9.47e-20!24;UBERON:0009881!9.47e-20!24;UBERON:0004141!9.47e-20!24;UBERON:0003084!9.47e-20!24;UBERON:0007005!9.47e-20!24;UBERON:0004139!9.47e-20!24;UBERON:0004291!9.47e-20!24;UBERON:0002385!2.16e-19!63;UBERON:0001015!2.16e-19!63;UBERON:0000383!2.16e-19!63;UBERON:0004237!2.64e-17!10;UBERON:0004695!2.64e-17!10;UBERON:0002111!2.64e-17!10;UBERON:0004178!2.64e-17!10;UBERON:0000947!3.01e-17!21;UBERON:0010191!3.01e-17!21;UBERON:0007100!3.70e-17!27;UBERON:0004290!8.43e-17!70;UBERON:0003498!5.67e-15!5;UBERON:0005985!5.67e-15!5;UBERON:0000025!3.07e-14!194;UBERON:0000486!2.08e-13!82;UBERON:0000914!3.58e-13!83;UBERON:0002329!3.58e-13!83;UBERON:0003077!3.58e-13!83;UBERON:0003059!3.58e-13!83;UBERON:0007282!3.58e-13!83;UBERON:0009618!3.58e-13!83;UBERON:0007285!3.58e-13!83;UBERON:0000415!4.06e-12!4;UBERON:0007240!4.06e-12!4;UBERON:0005742!4.06e-12!4;UBERON:0005734!4.06e-12!4;UBERON:0004664!4.06e-12!4;UBERON:0004663!4.06e-12!4;UBERON:0001135!4.98e-11!15;UBERON:0004111!3.78e-10!241;UBERON:0001621!9.75e-10!3;UBERON:0000483!3.54e-09!309;UBERON:0003834!4.26e-09!5;UBERON:0001533!4.26e-09!5;UBERON:0000119!5.57e-09!312;UBERON:0000477!1.08e-08!286;UBERON:0000490!1.89e-08!138;UBERON:0003081!4.25e-08!216;UBERON:0005256!3.11e-07!143;UBERON:0007497!6.44e-07!2;UBERON:0003643!6.44e-07!2;UBERON:0003504!6.44e-07!2;UBERON:0003469!6.44e-07!2;UBERON:0003496!6.44e-07!2;UBERON:0004797!6.44e-07!2;UBERON:0002012!6.44e-07!2;UBERON:0008886!6.44e-07!2;UBERON:0007303!6.44e-07!2;UBERON:0002061!6.44e-07!2;UBERON:0005432!6.44e-07!2;UBERON:0004363!6.44e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.79e-24;42!UBERON:0003509;1.79e-24;42!UBERON:0004572;1.79e-24;42!UBERON:0004573;1.47e-23;33!UBERON:0004571;1.47e-23;33!UBERON:0003498;3.11e-21;3!UBERON:0005985;3.11e-21;3!UBERON:0001621;3.11e-21;3!UBERON:0004797;2.20e-16;4!UBERON:0000415;2.20e-16;4!UBERON:0007240;2.20e-16;4!UBERON:0005742;2.20e-16;4!UBERON:0005734;2.20e-16;4!UBERON:0004664;2.20e-16;4!UBERON:0004663;2.20e-16;4!UBERON:0000947;3.27e-15;21!UBERON:0010191;3.27e-15;21!UBERON:0000078;1.47e-14;2!UBERON:0002012;1.47e-14;2!UBERON:0008886;1.47e-14;2!UBERON:0007500;4.40e-12;56!UBERON:0001981;4.40e-12;56!UBERON:0004537;4.40e-12;56!UBERON:0004237;4.85e-11;10!UBERON:0004695;4.85e-11;10!UBERON:0002111;4.85e-11;10!UBERON:0004178;4.85e-11;10!UBERON:0000055;7.56e-08;65!UBERON:0000948;1.20e-07;22!UBERON:0001135;2.09e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003498,5.47e-34,5;UBERON:0005985,5.47e-34,5;UBERON:0001637,3.06e-29,42;UBERON:0003509,3.06e-29,42;UBERON:0004572,3.06e-29,42;UBERON:0004573,9.49e-28,33;UBERON:0004571,9.49e-28,33;UBERON:0001621,2.71e-21,3;UBERON:0007500,4.73e-20,59;UBERON:0001981,4.73e-20,59;UBERON:0004537,4.73e-20,59;UBERON:0006965,4.73e-20,59;UBERON:0004872,5.70e-18,83;UBERON:0000055,4.80e-17,68;UBERON:0000415,2.51e-16,4;UBERON:0007240,2.51e-16,4;UBERON:0005742,2.51e-16,4;UBERON:0005734,2.51e-16,4;UBERON:0004664,2.51e-16,4;UBERON:0004663,2.51e-16,4;UBERON:0000947,3.27e-15,21;UBERON:0010191,3.27e-15,21;UBERON:0002049,1.61e-14,78;UBERON:0007798,1.61e-14,78;UBERON:0000078,1.68e-14,2;UBERON:0007497,1.68e-14,2;UBERON:0003643,1.68e-14,2;UBERON:0003504,1.68e-14,2;UBERON:0003469,1.68e-14,2;UBERON:0003496,1.68e-14,2;UBERON:0002012,1.68e-14,2;UBERON:0008886,1.68e-14,2;UBERON:0007303,1.68e-14,2;UBERON:0002061,1.68e-14,2;UBERON:0005432,1.68e-14,2;UBERON:0004363,1.68e-14,2;UBERON:0000948,3.82e-13,24;UBERON:0005498,3.82e-13,24;UBERON:0004140,3.82e-13,24;UBERON:0009881,3.82e-13,24;UBERON:0004141,3.82e-13,24;UBERON:0003084,3.82e-13,24;UBERON:0007005,3.82e-13,24;UBERON:0004139,3.82e-13,24;UBERON:0004291,3.82e-13,24;UBERON:0004535,6.05e-13,109;UBERON:0001009,1.63e-12,112;UBERON:0003914,7.55e-12,117;UBERON:0007100,1.35e-11,27;UBERON:0004237,4.54e-11,10;UBERON:0004695,4.54e-11,10;UBERON:0002111,4.54e-11,10;UBERON:0004178,4.54e-11,10;UBERON:0004145,5.68e-10,3;UBERON:0004797,1.49e-09,7;UBERON:0001134,2.51e-09,62;UBERON:0002036,2.51e-09,62;UBERON:0003082,2.51e-09,62;UBERON:0002385,5.53e-09,64;UBERON:0001015,5.53e-09,64;UBERON:0000383,5.53e-09,64;UBERON:0002329,6.15e-08,71;UBERON:0003059,6.15e-08,71;UBERON:0007282,6.15e-08,71;UBERON:0004290,6.15e-08,71;UBERON:0009618,6.15e-08,71;UBERON:0003077,8.35e-08,72;UBERON:0007285,8.35e-08,72;UBERON:0007524,1.12e-07,73;UBERON:0001135,2.01e-07,15;UBERON:0007503,4.43e-07,78 | |||
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| ||
|short_description=p1@ENST00000556405 | |||
}} | }} |
Latest revision as of 20:42, 24 July 2015
Short description: | p1@ENST00000556405 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000556405_5end |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | 55bp_to_ENST00000556405_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 2.71e-21 | 3 |
vascular associated smooth muscle cell | 1.29e-19 | 32 |
fibroblast of tunica adventitia of artery | 2.51e-16 | 4 |
fibroblast of the aortic adventitia | 2.51e-16 | 4 |
smooth muscle cell | 3.55e-14 | 43 |
smooth muscle myoblast | 3.55e-14 | 43 |
mesothelial cell | 3.84e-13 | 19 |
mesodermal cell | 1.49e-11 | 121 |
aortic smooth muscle cell | 4.54e-11 | 10 |
muscle cell | 1.01e-10 | 55 |
cardiocyte | 1.38e-10 | 16 |
muscle precursor cell | 4.40e-10 | 58 |
myoblast | 4.40e-10 | 58 |
multi-potent skeletal muscle stem cell | 4.40e-10 | 58 |
electrically responsive cell | 1.66e-09 | 61 |
electrically active cell | 1.66e-09 | 61 |
fibroblast of pulmonary artery | 2.69e-08 | 1 |
smooth muscle cell of the pulmonary artery | 6.68e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.17e-08 | 1 |