FFCP PHASE1:Hg19::chr14:70655625..70655644,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:70655625..70655644,- to FFCP PHASE1:Hg19::chr14:70655625..70655644,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6547 | |EntrezGene=6547 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11070 | |HGNC=11070 | ||
|TSSclassifier=strong | |||
|UniProt=Q96QG2,P57103,Q96QG1 | |UniProt=Q96QG2,P57103,Q96QG1 | ||
|association_with_transcript=142bp_to_ENST00000356921,ENST00000357887,ENST00000381269,ENST00000494208,NM_033262,NM_058240,NM_182932,NM_183002,uc001xlw.2,uc001xlx.2,uc001xly.2,uc001xlz.2,uc010ara.2_5end | |||
|cluster_id=chr14:70655625..70655644,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_4_at_SLC8A3_5end | |||
|id=chr14:70655625..70655644,- | |||
|ontology_enrichment_celltype=CL:0002274!1.87e-10!5;CL:0000457!1.87e-10!5;CL:0002191!1.87e-10!5;CL:0000097!1.87e-10!5;CL:0000831!1.87e-10!5;CL:0002028!1.87e-10!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.83e-19;5!CL:0000163;1.27e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.87e-19,5;CL:0002028,4.87e-19,5;CL:0000163,1.28e-10,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:630,6.99e-07,1;DOID:0050177,6.99e-07,1;DOID:0050427,6.99e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.44e-41!57;UBERON:0005068!1.44e-41!57;UBERON:0006241!1.44e-41!57;UBERON:0007135!1.44e-41!57;UBERON:0001017!2.52e-40!82;UBERON:0000073!6.93e-40!94;UBERON:0001016!6.93e-40!94;UBERON:0005743!1.20e-39!86;UBERON:0002780!1.84e-36!41;UBERON:0001890!1.84e-36!41;UBERON:0006240!1.84e-36!41;UBERON:0002616!1.28e-35!59;UBERON:0003080!2.30e-35!42;UBERON:0007023!5.95e-35!115;UBERON:0000955!5.81e-34!69;UBERON:0006238!5.81e-34!69;UBERON:0001893!8.13e-32!34;UBERON:0002020!1.27e-31!34;UBERON:0003528!1.27e-31!34;UBERON:0002791!3.30e-30!33;UBERON:0001869!2.16e-29!32;UBERON:0003075!1.23e-27!86;UBERON:0007284!1.23e-27!86;UBERON:0002346!8.07e-26!90;UBERON:0003056!1.70e-24!61;UBERON:0002619!1.03e-22!22;UBERON:0001950!9.25e-20!20;UBERON:0000956!1.97e-19!25;UBERON:0000203!1.97e-19!25;UBERON:0000153!6.41e-19!129;UBERON:0007811!6.41e-19!129;UBERON:0004121!6.50e-18!169;UBERON:0000033!1.21e-17!123;UBERON:0000924!3.84e-17!173;UBERON:0006601!3.84e-17!173;UBERON:0002308!1.89e-14!9;UBERON:0000125!1.89e-14!9;UBERON:0009663!8.28e-12!7;UBERON:0002420!1.45e-11!9;UBERON:0007245!1.45e-11!9;UBERON:0010009!1.45e-11!9;UBERON:0010011!1.45e-11!9;UBERON:0000454!1.45e-11!9;UBERON:0000369!6.43e-08!4;UBERON:0002435!6.43e-08!4;UBERON:0000204!6.43e-08!4;UBERON:0010082!6.43e-08!4;UBERON:0001871!6.45e-08!7;UBERON:0003076!9.06e-08!15;UBERON:0003057!9.06e-08!15;UBERON:0000200!1.07e-07!6;UBERON:0002298!2.69e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.29e-24;20!UBERON:0001869;1.93e-22;32!UBERON:0002619;9.27e-22;22!UBERON:0001893;7.01e-21;34!UBERON:0002791;1.80e-19;32!UBERON:0000956;4.85e-19;25!UBERON:0000203;4.85e-19;25!UBERON:0002780;1.34e-17;41!UBERON:0001890;1.34e-17;41!UBERON:0003528;2.37e-17;34!UBERON:0002020;2.37e-17;34!UBERON:0001872;2.77e-17;5!UBERON:0000073;1.47e-11;53!UBERON:0002616;1.47e-11;53!UBERON:0000955;8.05e-11;68!UBERON:0001017;1.01e-09;75!UBERON:0001016;6.40e-09;83!UBERON:0001389;3.83e-07;1!UBERON:0000026;3.83e-07;1!UBERON:0008784;3.83e-07;1!UBERON:0006058;3.83e-07;1!UBERON:0003663;3.83e-07;1!UBERON:0004256;3.83e-07;1!UBERON:0004708;3.83e-07;1!UBERON:0002101;3.83e-07;1!UBERON:0004709;3.83e-07;1!UBERON:0002529;3.83e-07;1!UBERON:0010538;3.83e-07;1!UBERON:0003661;3.83e-07;1!UBERON:0010890;3.83e-07;1!UBERON:0002471;3.83e-07;1!UBERON:0001383;3.83e-07;1!UBERON:0010758;3.83e-07;1!UBERON:0010707;3.83e-07;1!UBERON:0000978;3.83e-07;1!UBERON:0002103;3.83e-07;1!UBERON:0001665;3.83e-07;1!UBERON:0003823;3.83e-07;1!UBERON:0000154;3.83e-07;1!UBERON:0010709;3.83e-07;1!UBERON:0002022;4.96e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,6.73e-25,32;UBERON:0001950,5.97e-24,20;UBERON:0001893,2.53e-23,34;UBERON:0002780,4.30e-22,41;UBERON:0001890,4.30e-22,41;UBERON:0003080,4.30e-22,41;UBERON:0006240,4.30e-22,41;UBERON:0002619,1.04e-21,22;UBERON:0002791,4.22e-21,32;UBERON:0003528,9.26e-20,34;UBERON:0002020,9.26e-20,34;UBERON:0000073,3.49e-19,53;UBERON:0002616,3.49e-19,53;UBERON:0001016,4.52e-19,89;UBERON:0000956,5.35e-19,25;UBERON:0000203,5.35e-19,25;UBERON:0000955,1.46e-18,68;UBERON:0006238,1.46e-18,68;UBERON:0001049,5.25e-18,56;UBERON:0005068,5.25e-18,56;UBERON:0006241,5.25e-18,56;UBERON:0007135,5.25e-18,56;UBERON:0001872,2.67e-17,5;UBERON:0001017,4.24e-17,81;UBERON:0003056,4.97e-14,61;UBERON:0003075,2.20e-11,82;UBERON:0007284,2.20e-11,82;UBERON:0002346,1.02e-10,86;UBERON:0007023,5.16e-10,114;UBERON:0010371,2.32e-08,104;UBERON:0004121,4.44e-08,171;UBERON:0000924,4.44e-08,171;UBERON:0006601,4.44e-08,171;UBERON:0011216,1.09e-07,223;UBERON:0005418,3.73e-07,1;UBERON:0001389,3.73e-07,1;UBERON:0000026,3.73e-07,1;UBERON:0008784,3.73e-07,1;UBERON:0006058,3.73e-07,1;UBERON:0003663,3.73e-07,1;UBERON:0004256,3.73e-07,1;UBERON:0004708,3.73e-07,1;UBERON:0002101,3.73e-07,1;UBERON:0004709,3.73e-07,1;UBERON:0002529,3.73e-07,1;UBERON:0010538,3.73e-07,1;UBERON:0003661,3.73e-07,1;UBERON:0010890,3.73e-07,1;UBERON:0002471,3.73e-07,1;UBERON:0001383,3.73e-07,1;UBERON:0004357,3.73e-07,1;UBERON:0004347,3.73e-07,1;UBERON:0005420,3.73e-07,1;UBERON:0005732,3.73e-07,1;UBERON:0010758,3.73e-07,1;UBERON:0010707,3.73e-07,1;UBERON:0000978,3.73e-07,1;UBERON:0002103,3.73e-07,1;UBERON:0001665,3.73e-07,1;UBERON:0003823,3.73e-07,1;UBERON:0000154,3.73e-07,1;UBERON:0010709,3.73e-07,1;UBERON:0005733,3.73e-07,1;UBERON:0005730,3.73e-07,1;UBERON:0002022,4.43e-07,1;UBERON:0010314,5.88e-07,132;UBERON:0002581,7.82e-07,1;UBERON:0007190,9.25e-07,1 | |||
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| ||
|short_description=p4@SLC8A3 | |||
}} | }} |
Latest revision as of 20:14, 15 September 2015
Short description: | p4@SLC8A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC8A3_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 142bp_to_ENST00000356921, ENST00000357887, ENST00000381269, ENST00000494208, NM_033262, NM_058240, NM_182932, NM_183002, uc001xlw.2, uc001xlx.2, uc001xly.2, uc001xlz.2, uc010ara.2_5end |
EntrezGene: | SLC8A3 |
HGNC: | 11070 |
UniProt: | Q96QG2P57103Q96QG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.87e-19 | 5 |
basophil mast progenitor cell | 4.87e-19 | 5 |
endocrine cell | 1.28e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 6.99e-07 | 1 |
monogenic disease | 6.99e-07 | 1 |
xeroderma pigmentosum | 6.99e-07 | 1 |