FFCP PHASE1:Hg19::chr15:39420495..39420503,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:39420495..39420503,+ to FFCP PHASE1:Hg19::chr15:39420495..39420503,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:39420495..39420503,+ | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr15:39420495..39420503,+ | |||
|id=chr15:39420495..39420503,+ | |||
|ontology_enrichment_celltype=CL:0000057!6.72e-25!75;CL:0002139!2.14e-23!24;CL:0000115!8.59e-20!35;CL:0000136!3.49e-15!15;CL:0000071!8.57e-15!18;CL:0002546!8.57e-15!18;CL:0000055!1.37e-14!180;CL:0002078!2.62e-14!44;CL:0002620!9.38e-14!23;CL:0002371!4.50e-13!591;CL:0000048!3.15e-12!430;CL:0000144!8.14e-12!625;CL:0000723!1.00e-11!436;CL:0000213!1.42e-11!57;CL:0000215!1.42e-11!57;CL:0002334!4.35e-11!12;CL:0000034!4.45e-11!444;CL:0005020!8.03e-11!6;CL:0002138!8.03e-11!6;CL:0005022!8.03e-11!6;CL:0000222!2.80e-10!119;CL:0000548!1.89e-08!679;CL:0000004!1.89e-08!679;CL:0000255!1.89e-08!679;CL:0000012!2.80e-08!682;CL:1000413!3.32e-08!9;CL:0002559!1.19e-07!4;CL:1000306!1.65e-07!4;CL:0002547!1.65e-07!4;CL:0000134!2.05e-07!358;CL:0002320!6.08e-07!365;CL:0002544!8.25e-07!6;CL:0002580!9.18e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002580;4.30e-17;3!CL:0002620;6.51e-17;23!CL:0002334;1.34e-15;12!CL:0002138;4.86e-09;6!CL:0000346;3.67e-08;3!CL:1000428;3.67e-08;3!CL:0002579;4.88e-08;3!CL:0000136;8.63e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,3.77e-17,3;CL:0002620,9.04e-17,23;CL:0000057,2.25e-16,76;CL:0002334,8.87e-16,12;CL:0005020,4.93e-09,6;CL:0002138,4.93e-09,6;CL:0005022,4.93e-09,6;CL:0000136,7.64e-09,15;CL:0000346,2.97e-08,3;CL:1000428,2.97e-08,3;CL:0002579,3.68e-08,3;CL:0000048,9.54e-08,427;CL:0000723,1.52e-07,433;CL:0000034,2.77e-07,441 | |||
|ontology_enrichment_development_v019=CL:0005022;4.86e-09;6 | |||
|ontology_enrichment_disease=DOID:17!6.05e-09!5;DOID:450!6.05e-09!5;DOID:66!6.05e-09!5;DOID:423!6.05e-09!5;DOID:0080000!6.05e-09!5;DOID:11722!6.05e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:17;4.00e-10;5!DOID:450;4.00e-10;5!DOID:66;4.00e-10;5!DOID:423;4.00e-10;5!DOID:0080000;4.00e-10;5!DOID:11722;4.00e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.20e-10,5;DOID:450,4.20e-10,5;DOID:66,4.20e-10,5;DOID:423,4.20e-10,5;DOID:0080000,4.20e-10,5;DOID:11722,4.20e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!1.19e-19!69;UBERON:0002049!5.19e-18!79;UBERON:0007798!5.19e-18!79;UBERON:0004535!2.99e-17!110;UBERON:0001009!1.88e-16!113;UBERON:0004872!6.88e-16!84;UBERON:0001986!8.57e-15!18;UBERON:0004638!8.57e-15!18;UBERON:0004852!8.57e-15!18;UBERON:0001981!8.64e-15!60;UBERON:0007500!8.64e-15!60;UBERON:0004537!8.64e-15!60;UBERON:0006965!8.64e-15!60;UBERON:0003914!1.94e-11!118;UBERON:0000487!2.05e-11!22;UBERON:0003688!4.18e-11!6;UBERON:0002358!4.18e-11!6;UBERON:0003684!4.18e-11!6;UBERON:0001178!4.18e-11!6;UBERON:0002097!5.95e-11!40;UBERON:0002199!2.65e-10!45;UBERON:0002416!2.65e-10!45;UBERON:0006914!1.32e-09!25;UBERON:0001637!3.89e-09!42;UBERON:0003509!3.89e-09!42;UBERON:0004572!3.89e-09!42;UBERON:0003915!3.32e-08!9;UBERON:0004700!3.32e-08!9;UBERON:0001917!3.32e-08!9;UBERON:0001473!7.47e-08!8;UBERON:0004536!7.47e-08!8;UBERON:0006558!7.47e-08!8;UBERON:0002073!1.19e-07!4;UBERON:0005086!1.19e-07!4;UBERON:0000415!1.65e-07!4;UBERON:0007240!1.65e-07!4;UBERON:0005742!1.65e-07!4;UBERON:0005734!1.65e-07!4;UBERON:0004664!1.65e-07!4;UBERON:0004663!1.65e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.82e-09;41!UBERON:0000310;6.04e-09;10!UBERON:0002199;7.44e-09;46!UBERON:0002416;7.44e-09;46!UBERON:0003688;1.29e-08;6!UBERON:0002358;1.29e-08;6!UBERON:0003684;1.29e-08;6!UBERON:0001178;1.29e-08;6!UBERON:0000412;3.67e-08;3!UBERON:0001992;3.67e-08;3!UBERON:0001443;3.88e-08;11!UBERON:0001473;7.07e-07;8!UBERON:0004536;7.07e-07;8!UBERON:0006558;7.07e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.49e-13,41;UBERON:0002199,1.18e-11,46;UBERON:0002416,1.18e-11,46;UBERON:0000310,5.80e-09,10;UBERON:0003688,1.12e-08,6;UBERON:0002358,1.12e-08,6;UBERON:0003684,1.12e-08,6;UBERON:0001178,1.12e-08,6;UBERON:0000412,2.97e-08,3;UBERON:0001992,2.97e-08,3;UBERON:0001443,3.75e-08,11;UBERON:0001473,7.16e-07,8;UBERON:0004536,7.16e-07,8;UBERON:0006558,7.16e-07,8 | |||
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|short_description=p@chr15:39420495..39420503,+ | |||
}} | }} |
Latest revision as of 01:09, 25 July 2015
Short description: | p@chr15:39420495..39420503, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39420495..39420503, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 3.77e-17 | 3 |
skin fibroblast | 9.04e-17 | 23 |
fibroblast | 2.25e-16 | 76 |
preadipocyte | 8.87e-16 | 12 |
lymphangioblast | 4.93e-09 | 6 |
endothelial cell of lymphatic vessel | 4.93e-09 | 6 |
vascular lymphangioblast | 4.93e-09 | 6 |
fat cell | 7.64e-09 | 15 |
hair follicle dermal papilla cell | 2.97e-08 | 3 |
stem cell of epidermis | 2.97e-08 | 3 |
omentum preadipocyte | 3.68e-08 | 3 |
multi fate stem cell | 9.54e-08 | 427 |
somatic stem cell | 1.52e-07 | 433 |
stem cell | 2.77e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.49e-13 | 41 |
integument | 1.18e-11 | 46 |
integumental system | 1.18e-11 | 46 |
breast | 5.80e-09 | 10 |
omentum | 1.12e-08 | 6 |
peritoneum | 1.12e-08 | 6 |
abdominal cavity | 1.12e-08 | 6 |
visceral peritoneum | 1.12e-08 | 6 |
dermal papilla | 2.97e-08 | 3 |
papillary layer of dermis | 2.97e-08 | 3 |
chest | 3.75e-08 | 11 |
lymphatic vessel | 7.16e-07 | 8 |
lymph vasculature | 7.16e-07 | 8 |
lymphatic part of lymphoid system | 7.16e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.20e-10 | 5 |
myotonic disease | 4.20e-10 | 5 |
muscle tissue disease | 4.20e-10 | 5 |
myopathy | 4.20e-10 | 5 |
muscular disease | 4.20e-10 | 5 |
myotonic dystrophy | 4.20e-10 | 5 |