FFCP PHASE1:Hg19::chr15:69278159..69278160,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:69278159..69278160,+ | |||
|coexpression_cluster_id=C2346 | |||
|description=CAGE_peak_at_chr15:69278159..69278160,+ | |||
|id=chr15:69278159..69278160,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.88e-50;1!UBERON:0003056;7.35e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.52e-13!57;UBERON:0005068!4.52e-13!57;UBERON:0006241!4.52e-13!57;UBERON:0007135!4.52e-13!57;UBERON:0002616!1.76e-12!59;UBERON:0007023!1.94e-12!115;UBERON:0000200!6.82e-12!6;UBERON:0002780!8.70e-12!41;UBERON:0001890!8.70e-12!41;UBERON:0006240!8.70e-12!41;UBERON:0001869!1.35e-11!32;UBERON:0003080!1.98e-11!42;UBERON:0000955!4.89e-11!69;UBERON:0006238!4.89e-11!69;UBERON:0001017!5.50e-11!82;UBERON:0002020!7.05e-11!34;UBERON:0003528!7.05e-11!34;UBERON:0002346!7.54e-11!90;UBERON:0001893!9.09e-11!34;UBERON:0003075!1.86e-10!86;UBERON:0007284!1.86e-10!86;UBERON:0005743!3.03e-10!86;UBERON:0000073!6.23e-10!94;UBERON:0001016!6.23e-10!94;UBERON:0002791!1.96e-09!33;UBERON:0002771!6.79e-09!3;UBERON:0002308!1.17e-07!9;UBERON:0000125!1.17e-07!9;UBERON:0001950!1.47e-07!20;UBERON:0001870!4.45e-07!2;UBERON:0003056!6.69e-07!61;UBERON:0003135!7.61e-07!11;UBERON:0002619!8.67e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.88e-50;1!UBERON:0001785;1.88e-50;1!UBERON:0002464;1.88e-50;1!UBERON:0004904;1.88e-50;1!UBERON:0001021;1.88e-50;1!UBERON:0003714;4.90e-26;2!UBERON:0005162;4.90e-26;2!UBERON:0000122;4.90e-26;2!UBERON:0002702;9.18e-26;2!UBERON:0001870;1.12e-17;3!UBERON:0001950;1.86e-10;20!UBERON:0002619;1.22e-09;22!UBERON:0000200;1.57e-09;6!UBERON:0000956;1.20e-08;25!UBERON:0000203;1.20e-08;25!UBERON:0001871;2.18e-08;6!UBERON:0002791;1.25e-07;32!UBERON:0001869;1.25e-07;32!UBERON:0000473;1.54e-07;8!UBERON:0003528;3.81e-07;34!UBERON:0002020;3.81e-07;34!UBERON:0000010;7.69e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.42e-50,1;UBERON:0001785,2.42e-50,1;UBERON:0002464,2.42e-50,1;UBERON:0004904,2.42e-50,1;UBERON:0001021,2.42e-50,1;UBERON:0003902,2.42e-50,1;UBERON:0005425,2.42e-50,1;UBERON:0003714,5.56e-26,2;UBERON:0005162,5.56e-26,2;UBERON:0000122,5.56e-26,2;UBERON:0002702,9.18e-26,2;UBERON:0001870,1.12e-17,3;UBERON:0001781,1.00e-13,4;UBERON:0001950,1.86e-10,20;UBERON:0002619,1.22e-09,22;UBERON:0000966,1.32e-09,6;UBERON:0005388,1.32e-09,6;UBERON:0001802,1.32e-09,6;UBERON:0000200,1.57e-09,6;UBERON:0000956,1.20e-08,25;UBERON:0000203,1.20e-08,25;UBERON:0001871,2.18e-08,6;UBERON:0003056,4.61e-08,61;UBERON:0000473,1.49e-07,8;UBERON:0002791,5.04e-07,32;UBERON:0001869,5.04e-07,32;UBERON:0000010,7.91e-07,8 | |||
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| ||
|short_description=p@chr15:69278159..69278160,+ | |||
}} | }} |
Latest revision as of 03:46, 25 July 2015
Short description: | p@chr15:69278159..69278160, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:69278159..69278160, + |
Coexpression cluster: | C2346_optic_testis_brain_medulla_spinal_duodenum_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.42e-50 | 1 |
cranial nerve | 2.42e-50 | 1 |
nerve trunk | 2.42e-50 | 1 |
nerve connecting eye with brain | 2.42e-50 | 1 |
nerve | 2.42e-50 | 1 |
retinal neural layer | 2.42e-50 | 1 |
presumptive neural retina | 2.42e-50 | 1 |
neural tissue | 5.56e-26 | 2 |
multi cell component structure | 5.56e-26 | 2 |
neuron projection bundle | 5.56e-26 | 2 |
middle frontal gyrus | 9.18e-26 | 2 |
frontal cortex | 1.12e-17 | 3 |
layer of retina | 1.00e-13 | 4 |
neocortex | 1.86e-10 | 20 |
regional part of cerebral cortex | 1.22e-09 | 22 |
retina | 1.32e-09 | 6 |
photoreceptor array | 1.32e-09 | 6 |
posterior segment of eyeball | 1.32e-09 | 6 |
gyrus | 1.57e-09 | 6 |
cerebral cortex | 1.20e-08 | 25 |
pallium | 1.20e-08 | 25 |
temporal lobe | 2.18e-08 | 6 |
pre-chordal neural plate | 4.61e-08 | 61 |
testis | 1.49e-07 | 8 |
regional part of telencephalon | 5.04e-07 | 32 |
cerebral hemisphere | 5.04e-07 | 32 |
peripheral nervous system | 7.91e-07 | 8 |