FFCP PHASE1:Hg19::chr17:48712191..48712198,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:48712191..48712198,+ to FFCP PHASE1:Hg19::chr17:48712191..48712198,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8714 | |EntrezGene=8714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=54 | |HGNC=54 | ||
|TSSclassifier=strong | |||
|UniProt=D6RJE5 | |UniProt=D6RJE5 | ||
|association_with_transcript=16bp_to_ENST00000513511_5end | |||
|cluster_id=chr17:48712191..48712198,+ | |||
|coexpression_cluster_id=C2419 | |||
|description=CAGE_peak_5_at_ABCC3_5end | |||
|id=chr17:48712191..48712198,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.64e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.93e-09;12!CL:0000650;8.22e-07;2!CL:1000500;8.22e-07;2!CL:1000618;8.22e-07;2!CL:1001318;8.22e-07;2!CL:0002173;8.22e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.42e-09,12;CL:0000223,2.19e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.74e-10;30!UBERON:0009497;5.41e-08;13!UBERON:0004161;6.92e-07;11 | |||
|ontology_enrichment_disease=DOID:305!4.39e-11!106;DOID:0050687!4.29e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:299;4.68e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.64e-11,106;DOID:0050687,5.56e-09,143;DOID:299,4.57e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.79e-16!169;UBERON:0000925!3.79e-16!169;UBERON:0006595!3.79e-16!169;UBERON:0001007!1.75e-15!155;UBERON:0001555!1.75e-15!155;UBERON:0007026!1.75e-15!155;UBERON:0004921!9.67e-14!129;UBERON:0004185!9.67e-14!129;UBERON:0000077!3.71e-12!130;UBERON:0001041!1.27e-09!98;UBERON:0003104!9.02e-09!238;UBERON:0009142!9.02e-09!238;UBERON:0000062!1.18e-08!511;UBERON:0000481!1.19e-08!347;UBERON:0005911!3.64e-08!82;UBERON:0003929!4.00e-08!54;UBERON:0005177!1.47e-07!107;UBERON:0002100!1.58e-07!216;UBERON:0000467!2.11e-07!625;UBERON:0007499!2.32e-07!25;UBERON:0000480!2.74e-07!626;UBERON:0000468!3.35e-07!659;UBERON:0009497!3.40e-07!25;UBERON:0000015!3.40e-07!25;UBERON:0002423!3.40e-07!25;UBERON:0006235!3.40e-07!25;UBERON:0004161!3.40e-07!25;UBERON:0000475!3.55e-07!365;UBERON:0008835!5.24e-07!22;UBERON:0003894!5.24e-07!22;UBERON:0009856!8.13e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;9.89e-13;25!UBERON:0002107;8.12e-12;19!UBERON:0006925;8.12e-12;19!UBERON:0001264;1.38e-11;10!UBERON:0000949;2.70e-09;43!UBERON:0002075;5.28e-08;18!UBERON:0002365;5.83e-08;31!UBERON:0002330;5.83e-08;31!UBERON:0003891;3.76e-07;4!UBERON:0003567;8.22e-07;2!UBERON:0003838;8.22e-07;2!UBERON:0003586;8.22e-07;2!UBERON:0005169;8.22e-07;2!UBERON:0002321;8.22e-07;2!UBERON:0005215;8.22e-07;2!UBERON:0002303;8.22e-07;2!UBERON:0002319;8.22e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,4.83e-13,25;UBERON:0000015,4.83e-13,25;UBERON:0002423,4.83e-13,25;UBERON:0006235,4.83e-13,25;UBERON:0004161,4.83e-13,25;UBERON:0007499,7.30e-13,25;UBERON:0000949,1.48e-12,45;UBERON:0008835,1.76e-12,22;UBERON:0003894,1.76e-12,22;UBERON:0009856,2.83e-12,26;UBERON:0002107,6.05e-12,19;UBERON:0006925,6.05e-12,19;UBERON:0008836,6.05e-12,19;UBERON:0009854,7.58e-12,23;UBERON:0001264,1.36e-11,10;UBERON:0005177,1.33e-10,101;UBERON:0005911,5.17e-09,82;UBERON:0002365,3.74e-08,31;UBERON:0002330,3.74e-08,31;UBERON:0003929,4.18e-08,54;UBERON:0002075,4.37e-08,18;UBERON:0004921,3.18e-07,118;UBERON:0003891,9.54e-07,4 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0,0,2.53299878168311,0.631719873426831,1.30592814099919,0.491467873003018,0,0.218441372130172,0,0.618831764800233,0.994192127183747,0.672325146451775,0.602694528023977,0,0,0,0.204000691244253,0.313454721478088,0.286235987131057,0.821246550437305,0.502170558379211,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0.290796477559129,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.376484679085209,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0.570025487482497,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,1.15877215168659,0,0,0,0.221729397462564,0.43917392846563,0,0,0.370784442784429,1.62273696827342,1.39303789839414,0.797747763113191,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.49333509683432,0.622422070799533,0.269421344139376,0,0,0,0.234321431833797,0.312160076830321,0,0.747243402759005,0.23486899728753,0.323745888736263,0,0.61246251376468,0.368502951935304,0.723280468230358,0,0.494533858557114,0.910161361938026,0.718618141816238,0.168336113954066,0,0.277064115484183,0.438977620880838,0,0.600952235626387,0.113432183160021,0.179389635688862,0.213557388818567,0.423863802319124,0.300091096084402,0.103052529238439,1.54584324027377,0.18611685633159,0.843881661206331,0.0974370051611986,0,0.276149695926898,0,0.710019185033229,0.10075209822764,0,0,0,0.860413786167011,0,0,0,0,0.252320850875628,0,0,0.643240938192885,0,0.928735856063958,0,0.828147600278907,0.168584690078102,0.723033089650446,0.441175890929576,0.435758888184812,0.474541238222193,0.269662616320329,0.588664395376038,0.38474715694639,0,0,0,1.47008711385542,2.53510069643662,2.94848165003288,2.36315962672562,0,0.737930631258681,1.02940686179115,0,0,0.703702806881416,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0.936017060556951,0.594524649154913,0,0.335964256397719,0.567100388969546,0.268675568108545,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,1.04007436911366,0.514414748524284,1.41849132023278,0,0.142977993658148,0,0,0,0.355391948742546,0,0.602878754119172,0.871533458600294,0.499864955910285,1.2162378064119,0.502257091432126,0,0,0,0,0,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0.813795071099207,0.831883446123229,0,0,0.585707074963566,0,0,2.0694614258501,0,0.184369168541703,0.260650843404249,0.587403472388222,0,0,0.431428401637234,0,0,0,0,0.248107807818777,1.07423381301644,0,0.128139149255701,0,0.321707842287215,1.48418066444991,0,0.177561725313127,0,0,0.116210378459959,0.362578348774867,0,0.552485933615378,0.229628896329213,0.546273504020151,0.393373244878272,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,1.08378575017541,1.00337954770971,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0,0.824328093181778,0,0.082509499920588,0,0.650060246036521,0,0,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0.290033387828457,0.0852266274161009,0,0.165284915360978,0,1.65896526242959,0.4046311234222,0,0,0.6970372701606,0,0.532306030317022,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0.975267478179181,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0.563391205064483,0,0.196498082026242,0.35667105148125,0,0.422215270595328,0.329294892959902,0.379473173765715,0.699869440489966,0.0962221127255121,0,0,0.847294206991012,0.86101074534246,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24568648489864,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,1.02268682502155,0,0,0.359473404589307,1.9692329214317,0,0,0,1.11136990144637,1.93866549219044,0,0,0,0.0874599999961957,0.724999575434793,1.4793148277115,1.01701460117107,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0,0,0.435753854075961,0.278847488557207,0,1.25336261431701,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0.141353071433941,0,2.98578579323551,0.442287822516696,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,1.20990716048664,0,0.379119477770928,0,0,4.6525771089503,2.31694369112849,2.19753042885058,3.58417289318877,3.41531455235751,0,0.173559738335131,0.195984794828755,0,0,0,0.580537987734511,0.65780385377567,0.656923656425674,0.0969890164884194,0,0,0,0,0,0,1.68333522528221,0.213452994739353,0,1.29681375438695,0,0,1.00838358591705,1.86378803348149,0.707082103850386,0.407712618220842,0.104602846312333,1.52997326454483,0,0,0,0,2.14882720709979,0,0,0,0,0,0,0,0,1.08089965062721,0,0.6302654584577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| 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| ||
|short_description=p5@ABCC3 | |||
}} | }} |
Latest revision as of 03:23, 16 September 2015
Short description: | p5@ABCC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ABCC3_5end |
Coexpression cluster: | C2419_tubular_hepatoma_lung_signet_bile_pleomorphic_Mesenchymal |
Association with transcript: | 16bp_to_ENST00000513511_5end |
EntrezGene: | ABCC3 |
HGNC: | 54 |
UniProt: | D6RJE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.42e-09 | 12 |
endodermal cell | 2.19e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 4.83e-13 | 25 |
anatomical boundary | 4.83e-13 | 25 |
hepatobiliary system | 4.83e-13 | 25 |
foregut-midgut junction | 4.83e-13 | 25 |
septum transversum | 4.83e-13 | 25 |
epithelial sac | 7.30e-13 | 25 |
endocrine system | 1.48e-12 | 45 |
hepatic diverticulum | 1.76e-12 | 22 |
liver primordium | 1.76e-12 | 22 |
sac | 2.83e-12 | 26 |
liver | 6.05e-12 | 19 |
digestive gland | 6.05e-12 | 19 |
liver bud | 6.05e-12 | 19 |
digestive tract diverticulum | 7.58e-12 | 23 |
pancreas | 1.36e-11 | 10 |
trunk region element | 1.33e-10 | 101 |
endo-epithelium | 5.17e-09 | 82 |
exocrine gland | 3.74e-08 | 31 |
exocrine system | 3.74e-08 | 31 |
gut epithelium | 4.18e-08 | 54 |
viscus | 4.37e-08 | 18 |
subdivision of digestive tract | 3.18e-07 | 118 |
stroma | 9.54e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.64e-11 | 106 |
cell type cancer | 5.56e-09 | 143 |
adenocarcinoma | 4.57e-07 | 25 |