FFCP PHASE1:Hg19::chr17:56033198..56033217,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:56033198..56033217,- to FFCP PHASE1:Hg19::chr17:56033198..56033217,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:56033198..56033217,- | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_at_chr17:56033198..56033217,- | |||
|id=chr17:56033198..56033217,- | |||
|ontology_enrichment_celltype=CL:0000066!2.92e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.57e-19;2!CL:0000242;3.57e-19;2!CL:0000239;1.89e-12;3!CL:1000615;1.89e-12;3!CL:0002306;1.89e-12;3!CL:0002553;5.78e-10;1!CL:1000507;2.59e-08;10!CL:1000494;2.59e-08;10!CL:0000312;3.30e-08;5!CL:0002681;5.26e-07;12!CL:0002584;5.26e-07;12!CL:0000240;5.66e-07;6!CL:0000311;5.66e-07;6!CL:0000079;5.66e-07;6!CL:0000237;5.66e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.10e-19,2;CL:0000239,3.56e-12,3;CL:1000615,3.56e-12,3;CL:0002306,3.56e-12,3;CL:0002553,3.71e-10,1;CL:1000507,3.42e-08,10;CL:1000494,3.42e-08,10;CL:0000312,3.48e-08,5;CL:0000240,5.92e-07,6;CL:0000311,5.92e-07,6;CL:0000079,5.92e-07,6;CL:0000237,5.92e-07,6;CL:0000036,5.92e-07,6;CL:0000357,5.92e-07,6;CL:0000114,5.92e-07,6;CL:0002681,6.61e-07,12;CL:0002584,6.61e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000357;5.66e-07;6!CL:0000114;5.66e-07;6 | |||
|ontology_enrichment_disease=DOID:0050687!1.23e-09!143;DOID:305!3.53e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.98e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0009569!1.94e-09!113;UBERON:0000058!3.53e-09!26;UBERON:0000464!2.94e-08!104;UBERON:0000062!6.43e-08!511;UBERON:0008947!6.43e-08!38;UBERON:0003258!6.43e-08!38;UBERON:0000064!6.70e-08!219;UBERON:0005177!2.08e-07!107;UBERON:0000475!2.42e-07!365;UBERON:0000466!2.81e-07!126;UBERON:0002048!7.91e-07!22;UBERON:0000117!7.91e-07!22;UBERON:0000171!7.91e-07!22;UBERON:0000170!7.91e-07!22;UBERON:0005597!7.91e-07!22;UBERON:0000118!7.91e-07!22;UBERON:0005178!8.39e-07!34;UBERON:0002224!8.39e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.80e-20;4!UBERON:0010133;2.80e-20;4!UBERON:0001905;1.25e-18;2!UBERON:0002757;1.25e-18;2!UBERON:0010134;1.25e-18;2!UBERON:0005408;1.25e-18;2!UBERON:0001899;1.25e-18;2!UBERON:0006853;1.89e-12;3!UBERON:0007685;1.89e-12;3!UBERON:0004134;1.89e-12;3!UBERON:0001894;7.68e-12;7!UBERON:0004913;5.78e-10;1!UBERON:0003703;5.78e-10;1!UBERON:0001174;5.78e-10;1!UBERON:0004914;5.78e-10;1!UBERON:0002784;8.81e-10;4!UBERON:0004211;2.59e-08;10!UBERON:0009773;2.59e-08;10!UBERON:0001231;2.59e-08;10!UBERON:0004810;2.59e-08;10!UBERON:0001225;5.26e-07;12!UBERON:0008987;5.26e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.72e-20,4;UBERON:0010133,1.72e-20,4;UBERON:0001905,7.03e-19,2;UBERON:0002757,7.03e-19,2;UBERON:0010134,7.03e-19,2;UBERON:0005408,7.03e-19,2;UBERON:0001899,7.03e-19,2;UBERON:0006853,3.56e-12,3;UBERON:0007685,3.56e-12,3;UBERON:0004134,3.56e-12,3;UBERON:0001894,5.83e-12,7;UBERON:0006222,5.83e-12,7;UBERON:0004913,3.10e-10,1;UBERON:0003703,3.10e-10,1;UBERON:0001174,3.10e-10,1;UBERON:0004914,3.10e-10,1;UBERON:0002784,6.63e-10,4;UBERON:0004810,3.42e-08,10;UBERON:0001225,6.61e-07,12;UBERON:0008987,6.61e-07,12 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,1.0007329835313,0,0,0,0,0,0.491467873003018,0.697801167972428,0.218441372130172,0.263766978228454,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0.121973706129595,0,0,0,0,0,0,0,1.38134921352481,0,0,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,1.35359883872224,0.462092022626489,0,0,0.422206515571503,0,0,0,0,0.541892875087706,0,1.01950509218015,0.831076008928724,1.11937377361089,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,1.34060455107157,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98895302764489,0,0.593929361665277,0,0,0,0,0,3.80025734630388,0,0,0,0.102268682502155,0,0,0.898683511473268,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.384751292518985,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0.485560759068186,0.789168805698781,0,0,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0.277349346026277,0.347119476670262,0,0,0,0,0,0,0,0.387956065953678,0.0882561266915003,0.90392296312213,0,0,0,0,1.04206466326994,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.412618309791701,0,0,0,0.0607495566580247,0,0.788057072991982,0.262272940674991,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0.513260513652988,0,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0.110929051536852,0.124192805882767,0.830091809617385,0.124980407962107,0,0.285465333544967,0,3.27834434064817,9.27494583109281,0,0,0.554805861502613,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0.57785949122191,0,0,0,0,0,0,0,0,0,0,0.168942440653073,1.53744911152768,0,0,0,0,0,0,0.655219697692825,0.245772908753719,0.633936370075881,0,0,0,0,0,0,0,1.02315497042921,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,1.92212912082159,0,0,0,0,0,0,0,0,0,3.74991285114801,1.68141861109412,0,1.36597314810779,0,0,0.514464028312255,0,0,0.118193840883968,0,0.156986185701028,0.157115589916002,0,0,0,0,0.78624198594322,3.31828584638726,1.3948971044175,0,0,0,0,0,0,0,0.0852134047591577,0.846774100381858,1.14553434272025,0,0,0.335566295393377,0.098150233615243,0.243835849964539,0,0.102662806856247,1.1598144313382,0,0.701818390386317,0,0,0,0.769583617218004,2.56636834063345,0,0,0.940634592723046,0,0.942706188406504,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0.240724100067505,0.730336388246517,0,0.143339583151451,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0.12729431655633,0.202117188958219,0,0,0,0.286888821570705,0,0.162806537221949,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0.214100523890983,0.281908808191942,1.0007329835313,0,0,0,0,0,0.491467873003018,0.697801167972428,0.218441372130172,0.263766978228454,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0.121973706129595,0,0,0,0,0,0,0,1.38134921352481,0,0,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,1.35359883872224,0.462092022626489,0,0,0.422206515571503,0,0,0,0,0.541892875087706,0,1.01950509218015,0.831076008928724,1.11937377361089,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,1.34060455107157,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98895302764489,0,0.593929361665277,0,0,0,0,0,3.80025734630388,0,0,0,0.102268682502155,0,0,0.898683511473268,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.384751292518985,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0.485560759068186,0.789168805698781,0,0,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0.277349346026277,0.347119476670262,0,0,0,0,0,0,0,0.387956065953678,0.0882561266915003,0.90392296312213,0,0,0,0,1.04206466326994,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.412618309791701,0,0,0,0.0607495566580247,0,0.788057072991982,0.262272940674991,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0.513260513652988,0,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0.110929051536852,0.124192805882767,0.830091809617385,0.124980407962107,0,0.285465333544967,0,3.27834434064817,9.27494583109281,0,0,0.554805861502613,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0.57785949122191,0,0,0,0,0,0,0,0,0,0,0.168942440653073,1.53744911152768,0,0,0,0,0,0,0.655219697692825,0.245772908753719,0.633936370075881,0,0,0,0,0,0,0,1.02315497042921,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,1.92212912082159,0,0,0,0,0,0,0,0,0,3.74991285114801,1.68141861109412,0,1.36597314810779,0,0,0.514464028312255,0,0,0.118193840883968,0,0.156986185701028,0.157115589916002,0,0,0,0,0.78624198594322,3.31828584638726,1.3948971044175,0,0,0,0,0,0,0,0.0852134047591577,0.846774100381858,1.14553434272025,0,0,0.335566295393377,0.098150233615243,0.243835849964539,0,0.102662806856247,1.1598144313382,0,0.701818390386317,0,0,0,0.769583617218004,2.56636834063345,0,0,0.940634592723046,0,0.942706188406504,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0.240724100067505,0.730336388246517,0,0.143339583151451,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0.12729431655633,0.202117188958219,0,0,0,0.286888821570705,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:56033198..56033217,- | |||
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Latest revision as of 19:13, 25 July 2015
Short description: | p@chr17:56033198..56033217, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:56033198..56033217, - |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.10e-19 | 2 |
brush border epithelial cell | 3.56e-12 | 3 |
kidney cortex tubule cell | 3.56e-12 | 3 |
epithelial cell of proximal tubule | 3.56e-12 | 3 |
lung fibroblast | 3.71e-10 | 1 |
kidney tubule cell | 3.42e-08 | 10 |
nephron tubule epithelial cell | 3.42e-08 | 10 |
keratinocyte | 3.48e-08 | 5 |
stratified squamous epithelial cell | 5.92e-07 | 6 |
keratin accumulating cell | 5.92e-07 | 6 |
stratified epithelial cell | 5.92e-07 | 6 |
keratinizing barrier epithelial cell | 5.92e-07 | 6 |
epithelial fate stem cell | 5.92e-07 | 6 |
stratified epithelial stem cell | 5.92e-07 | 6 |
surface ectodermal cell | 5.92e-07 | 6 |
kidney cortical cell | 6.61e-07 | 12 |
renal cortical epithelial cell | 6.61e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 1.72e-20 | 4 |
neuroendocrine gland | 1.72e-20 | 4 |
pineal body | 7.03e-19 | 2 |
regional part of epithalamus | 7.03e-19 | 2 |
secretory circumventricular organ | 7.03e-19 | 2 |
circumventricular organ | 7.03e-19 | 2 |
epithalamus | 7.03e-19 | 2 |
renal cortex tubule | 3.56e-12 | 3 |
region of nephron tubule | 3.56e-12 | 3 |
proximal tubule | 3.56e-12 | 3 |
diencephalon | 5.83e-12 | 7 |
future diencephalon | 5.83e-12 | 7 |
hepatopancreatic ampulla | 3.10e-10 | 1 |
extrahepatic bile duct | 3.10e-10 | 1 |
common bile duct | 3.10e-10 | 1 |
duodenal papilla | 3.10e-10 | 1 |
regional part of diencephalon | 6.63e-10 | 4 |
nephron tubule epithelium | 3.42e-08 | 10 |
cortex of kidney | 6.61e-07 | 12 |
renal parenchyma | 6.61e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.98e-07 | 143 |