FFCP PHASE1:Hg19::chr18:48345970..48346016,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:48345970..48346016,- to FFCP PHASE1:Hg19::chr18:48345970..48346016,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83876 | |EntrezGene=83876 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24121 | |HGNC=24121 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=55bp_to_uc010xdn.1_5end | |||
|cluster_id=chr18:48345970..48346016,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_MRO_5end | |||
|id=chr18:48345970..48346016,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.40e-20;82!UBERON:0006241;3.28e-07;3!UBERON:0003057;3.28e-07;3!UBERON:0006215;8.00e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.41e-51!115;UBERON:0001049!1.57e-42!57;UBERON:0005068!1.57e-42!57;UBERON:0006241!1.57e-42!57;UBERON:0007135!1.57e-42!57;UBERON:0001017!5.41e-37!82;UBERON:0002616!9.52e-36!59;UBERON:0005743!1.04e-35!86;UBERON:0000955!1.42e-35!69;UBERON:0006238!1.42e-35!69;UBERON:0000073!2.78e-35!94;UBERON:0001016!2.78e-35!94;UBERON:0003075!4.21e-34!86;UBERON:0007284!4.21e-34!86;UBERON:0002780!5.30e-33!41;UBERON:0001890!5.30e-33!41;UBERON:0006240!5.30e-33!41;UBERON:0003080!7.33e-32!42;UBERON:0002346!1.49e-31!90;UBERON:0001893!3.01e-26!34;UBERON:0002020!4.46e-26!34;UBERON:0003528!4.46e-26!34;UBERON:0002791!3.20e-25!33;UBERON:0000153!7.19e-25!129;UBERON:0007811!7.19e-25!129;UBERON:0003056!9.69e-25!61;UBERON:0001869!4.14e-24!32;UBERON:0000033!1.06e-23!123;UBERON:0004121!8.69e-22!169;UBERON:0000924!1.16e-20!173;UBERON:0006601!1.16e-20!173;UBERON:0002619!1.94e-18!22;UBERON:0000956!1.21e-16!25;UBERON:0000203!1.21e-16!25;UBERON:0001950!3.47e-16!20;UBERON:0000481!2.06e-14!347;UBERON:0000062!8.39e-13!511;UBERON:0000475!9.56e-12!365;UBERON:0002420!1.14e-11!9;UBERON:0007245!1.14e-11!9;UBERON:0010009!1.14e-11!9;UBERON:0010011!1.14e-11!9;UBERON:0000454!1.14e-11!9;UBERON:0003076!1.56e-11!15;UBERON:0003057!1.56e-11!15;UBERON:0002308!2.20e-11!9;UBERON:0000125!2.20e-11!9;UBERON:0000477!8.48e-11!286;UBERON:0000064!3.22e-10!219;UBERON:0004732!1.19e-09!13;UBERON:0000922!1.23e-09!612;UBERON:0009663!2.04e-09!7;UBERON:0000468!4.99e-09!659;UBERON:0004733!1.31e-08!12;UBERON:0002028!1.31e-08!12;UBERON:0007277!1.31e-08!12;UBERON:0000119!1.54e-08!312;UBERON:0001894!3.20e-08!7;UBERON:0006222!3.20e-08!7;UBERON:0000483!3.42e-08!309;UBERON:0000923!3.75e-08!604;UBERON:0005291!3.75e-08!604;UBERON:0006598!3.75e-08!604;UBERON:0002532!3.75e-08!604;UBERON:0002050!4.57e-08!605;UBERON:0005423!4.57e-08!605;UBERON:0000025!5.77e-08!194;UBERON:0000200!1.11e-07!6;UBERON:0001871!1.38e-07!7;UBERON:0002298!1.85e-07!8;UBERON:0000349!2.27e-07!5;UBERON:0000467!2.91e-07!625;UBERON:0000480!3.51e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.48e-42;41!UBERON:0001890;3.48e-42;41!UBERON:0001893;4.75e-40;34!UBERON:0000073;2.97e-39;53!UBERON:0002616;2.97e-39;53!UBERON:0003528;3.51e-39;34!UBERON:0002020;3.51e-39;34!UBERON:0002791;1.28e-38;32!UBERON:0001869;1.35e-38;32!UBERON:0002619;7.73e-34;22!UBERON:0001950;1.15e-29;20!UBERON:0000956;3.42e-29;25!UBERON:0000203;3.42e-29;25!UBERON:0000955;1.51e-26;68!UBERON:0001017;3.50e-26;75!UBERON:0001016;2.35e-22;83!UBERON:0002420;5.07e-20;9!UBERON:0007245;5.07e-20;9!UBERON:0010009;5.07e-20;9!UBERON:0010011;5.07e-20;9!UBERON:0000454;5.07e-20;9!UBERON:0000125;1.57e-19;9!UBERON:0002308;1.57e-19;9!UBERON:0007023;5.53e-17;114!UBERON:0009663;6.67e-16;7!UBERON:0004732;6.34e-15;13!UBERON:0001894;9.48e-14;7!UBERON:0004733;4.50e-13;12!UBERON:0002028;4.50e-13;12!UBERON:0002298;5.55e-13;6!UBERON:0000200;8.92e-13;6!UBERON:0000349;3.41e-12;5!UBERON:0011216;2.94e-11;132!UBERON:0001871;3.57e-11;6!UBERON:0000369;7.03e-10;4!UBERON:0002435;7.03e-10;4!UBERON:0000204;7.03e-10;4!UBERON:0010314;8.29e-10;132!UBERON:0002784;1.20e-08;4!UBERON:0002680;6.88e-08;9!UBERON:0001895;6.88e-08;9!UBERON:0003296;8.10e-08;4!UBERON:0010133;8.10e-08;4!UBERON:0005383;8.94e-08;3!UBERON:0005382;8.94e-08;3!UBERON:0001896;1.52e-07;3!UBERON:0005290;1.52e-07;3!UBERON:0001870;2.69e-07;3!UBERON:0002021;3.14e-07;5!UBERON:0002240;3.28e-07;3!UBERON:0005174;3.28e-07;3!UBERON:0001137;3.28e-07;3!UBERON:0001872;3.49e-07;5!UBERON:0000988;4.25e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.87e-77,56;UBERON:0005068,2.87e-77,56;UBERON:0006241,2.87e-77,56;UBERON:0007135,2.87e-77,56;UBERON:0000073,2.05e-71,53;UBERON:0002616,2.05e-71,53;UBERON:0003075,8.59e-65,82;UBERON:0007284,8.59e-65,82;UBERON:0002346,4.97e-61,86;UBERON:0001017,1.98e-60,81;UBERON:0000955,7.31e-60,68;UBERON:0006238,7.31e-60,68;UBERON:0002780,2.90e-59,41;UBERON:0001890,2.90e-59,41;UBERON:0003080,2.90e-59,41;UBERON:0006240,2.90e-59,41;UBERON:0007023,1.70e-58,114;UBERON:0001016,1.28e-57,89;UBERON:0010371,1.31e-49,104;UBERON:0010314,6.05e-49,132;UBERON:0003056,5.10e-48,61;UBERON:0001893,7.97e-47,34;UBERON:0003528,1.65e-46,34;UBERON:0002020,1.65e-46,34;UBERON:0001869,6.89e-43,32;UBERON:0002791,7.26e-43,32;UBERON:0002619,8.35e-34,22;UBERON:0004121,2.18e-33,171;UBERON:0000924,2.18e-33,171;UBERON:0006601,2.18e-33,171;UBERON:0001950,1.24e-29,20;UBERON:0000956,3.66e-29,25;UBERON:0000203,3.66e-29,25;UBERON:0011216,1.14e-26,223;UBERON:0000025,2.28e-22,192;UBERON:0002420,4.93e-20,9;UBERON:0007245,4.93e-20,9;UBERON:0010009,4.93e-20,9;UBERON:0010011,4.93e-20,9;UBERON:0000454,4.93e-20,9;UBERON:0000125,1.63e-19,9;UBERON:0002308,1.63e-19,9;UBERON:0003076,2.70e-18,15;UBERON:0003057,2.70e-18,15;UBERON:0004111,4.02e-17,240;UBERON:0009663,6.48e-16,7;UBERON:0004732,6.60e-15,13;UBERON:0000483,2.27e-14,306;UBERON:0000119,4.64e-14,309;UBERON:0001894,9.79e-14,7;UBERON:0006222,9.79e-14,7;UBERON:0004733,4.75e-13,12;UBERON:0002028,4.75e-13,12;UBERON:0007277,4.75e-13,12;UBERON:0002298,5.80e-13,6;UBERON:0000200,9.51e-13,6;UBERON:0000349,3.49e-12,5;UBERON:0001871,3.45e-11,6;UBERON:0000369,6.89e-10,4;UBERON:0002435,6.89e-10,4;UBERON:0000204,6.89e-10,4;UBERON:0010082,6.89e-10,4;UBERON:0000923,1.40e-08,560;UBERON:0010316,1.40e-08,560;UBERON:0005291,1.40e-08,560;UBERON:0006598,1.40e-08,560;UBERON:0010317,1.40e-08,560;UBERON:0002532,1.40e-08,560;UBERON:0002784,1.42e-08,4;UBERON:0002050,2.28e-08,564;UBERON:0005423,5.71e-08,581;UBERON:0000922,6.58e-08,592;UBERON:0002680,7.25e-08,9;UBERON:0001895,7.25e-08,9;UBERON:0010092,7.25e-08,9;UBERON:0005383,8.57e-08,3;UBERON:0005382,8.57e-08,3;UBERON:0003296,9.17e-08,4;UBERON:0010133,9.17e-08,4;UBERON:0001896,1.50e-07,3;UBERON:0005290,1.50e-07,3;UBERON:0010096,1.50e-07,3;UBERON:0001870,2.72e-07,3;UBERON:0002240,2.96e-07,3;UBERON:0005174,2.96e-07,3;UBERON:0001137,2.96e-07,3;UBERON:0002021,3.28e-07,5;UBERON:0001872,3.61e-07,5;UBERON:0000988,4.48e-07,3 | |||
|phase1_expression=0.54503513781167,1.71280419112787,0.281908808191942,0,3.12872766099101,0,0,0,2.35067065379855,0,0,0,0,3.46545788288131,5.63375538737457,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671746422719773,0,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,3.35350429851818,1.40648818027883,0,0,0,0,0,0,0,0,3.86388272718252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55605517699883,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0.161872944368132,0,3.47062091133319,0,4.23635702820638,0,0,0,0,0.841680569770331,0,0.277064115484183,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.10366105501537,0,0,0,0.643240938192885,0,0,0.721879481669586,0.709840800239063,0.168584690078102,0,0.110293972732394,0.217879444092406,0.71181185733329,0.134831308160164,0.588664395376038,0,0,0,0,0,0,0,4.72631925345123,0,0.122988438543114,0.171567810298526,0,0,0,0,0,2.07986957055916,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,3.57656445851882,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0.355391948742546,0,0,0,0.599837947092342,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,3.43536176813592,0,1.08506009479894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.246381468041427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0.096670718292122,0.616194468458578,0.307007349452259,0,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,1.9676842561399,0,0,0,0,0,0,0,0,0,1.13841952129715,2.44954304171488,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0,0,16.9005100120271,16.45832172003,0,0,0,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0.197286811273867,0,0,13.5706584453331,12.7092294481736,1.99613798001194,0,0,0,0,0,0,0,0,0,21.2577932595321,13.9891868805473,6.10326945268333,6.52417633594225,5.02430952221031,15.3569778007781,0.544692317594951,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0.995261931078505,3.09601475761687,1.22206028986725,0,0,0,18.4005093037248,0.802577647298789,14.9929245264217,0,0,0,2.76209081994573,7.25944296291983,0,1.13735843331278,0,0,0,0,0,0,0,0.277349346026277,0,0,0,2.44617335538842,0,0.290268993867255,0.292357268344742,0.164230914106418,0.193978032976839,0,0.225980740780532,0,0,14.4981722738962,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0.101998217636322,0,18.6130289500035,16.5655508459312,0,0,0,1.67569440763353,2.7499250881402,0,0.399358000997982,0.858452096273142,0.223171457441873,0,0,0,0,0,0,0,1.6087933092499,19.0855125554233,23.0183756328563,0.482259445395058,0,0,0,0,12.0891617749469,0,1.49730843868477,0.996637174564964,0,0,0,0.714695326373367,3.31045985182716,0,1.08599920350743,0,0,0,0,0,0.113312091520126,1.31897010310274,1.32506888912221,9.04980694530854,9.12404952024561,0,0,0,0.157204305099666,0,0,0,0,0,1.08803560673895,1.0027595760908,1.22538230705385,0,0,7.08854543973589,9.15196986764724,11.517565624998,13.1884115008716,9.20711127755874,17.8837640471184,0.276697269872462,0,0.151649117541648,2.28372266835974,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0.537266523244462,0,0,0,0,0.168942440653073,0,0.345430341731199,0,9.26331522216596,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,2.23457967189298,0.318004350653419,0,0,0,0,17.0207446505618,7.08482881627925,11.4936378521149,10.2558182120378,0,12.3099909386308,15.3401863350259,15.704636228507,0,0,0,0,0,0,0,0.82731361184183,0,0,0,0.163771917510097,0,12.0216900620742,6.24862478891078,8.06078506354618,12.6831620387814,0,0,0,0,0,1.07140367175657,4.03540466662589,3.64179362541979,2.73194629621557,0.0887023701626388,0,0,8.22433769019664,12.0364175620014,0.236387681767936,0,0.39246546425257,14.6117498621882,0,0,0,0,2.93053831124291,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0.846774100381858,0,0,0,0,0,0,1.29485767437579,0.821302454849976,0,0,0,0.198950775161368,0.118920090777569,0,0.219881033490858,0,4.78479780269257,7.21246549663059,0,0,0,13.3489757638163,17.5257376192981,2.9585900930838,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,10.3204499869045,0,14.4141959204739,0,6.87734892670021,0,0,0,0,0.218531143927391,0,0,1.06886962106224,0.36757959813938,0,0.833565680400634,0.267964130156178,16.5833887891756,12.92912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| ||
|short_description=p1@MRO | |||
}} | }} |
Latest revision as of 18:33, 19 September 2015
Short description: | p1@MRO |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRO_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 55bp_to_uc010xdn.1_5end |
EntrezGene: | MRO |
HGNC: | 24121 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data