FFCP PHASE1:Hg19::chr19:10736183..10736247,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:10736183..10736247,+ to FFCP PHASE1:Hg19::chr19:10736183..10736247,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57153 | |EntrezGene=57153 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17292 | |HGNC=17292 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETY3 | |UniProt=E7ETY3 | ||
|association_with_transcript=0bp_to_ENST00000380614_5end | |||
|cluster_id=chr19:10736183..10736247,+ | |||
|coexpression_cluster_id=C3745 | |||
|description=CAGE_peak_2_at_SLC44A2_5end | |||
|id=chr19:10736183..10736247,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.35e-17!254;CL:0002076!1.76e-10!43;CL:0002321!2.02e-07!248;CL:0000220!3.60e-07!246;CL:0002368!9.14e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.60e-08;42!CL:0000349;9.08e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.19e-16,253;CL:0002076,2.11e-10,42;CL:0000349,8.28e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.33e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.45e-22!365;UBERON:0000481!4.18e-21!347;UBERON:0000468!7.60e-18!659;UBERON:0004119!1.09e-17!169;UBERON:0000925!1.09e-17!169;UBERON:0006595!1.09e-17!169;UBERON:0000064!3.26e-15!219;UBERON:0003104!1.80e-14!238;UBERON:0009142!1.80e-14!238;UBERON:0000467!1.86e-13!625;UBERON:0002100!2.45e-13!216;UBERON:0000480!3.57e-13!626;UBERON:0000483!2.54e-12!309;UBERON:0001007!2.92e-12!155;UBERON:0001555!2.92e-12!155;UBERON:0007026!2.92e-12!155;UBERON:0000062!4.68e-12!511;UBERON:0000922!5.03e-12!612;UBERON:0000119!7.79e-12!312;UBERON:0002050!8.13e-11!605;UBERON:0005423!8.13e-11!605;UBERON:0000923!1.44e-10!604;UBERON:0005291!1.44e-10!604;UBERON:0006598!1.44e-10!604;UBERON:0002532!1.44e-10!604;UBERON:0001004!2.35e-10!72;UBERON:0000464!6.47e-10!104;UBERON:0000077!1.89e-09!130;UBERON:0004111!2.49e-09!241;UBERON:0000477!6.97e-09!286;UBERON:0005631!8.60e-09!14;UBERON:0000158!8.60e-09!14;UBERON:0009569!1.38e-08!113;UBERON:0000466!2.49e-08!126;UBERON:0004921!2.69e-08!129;UBERON:0004185!2.69e-08!129;UBERON:0004121!3.07e-08!169;UBERON:0000915!4.45e-08!52;UBERON:0005157!1.47e-07!51;UBERON:0000161!1.86e-07!35;UBERON:0005177!2.32e-07!107;UBERON:0000924!3.00e-07!173;UBERON:0006601!3.00e-07!173;UBERON:0001008!3.24e-07!45;UBERON:0006554!4.06e-07!44;UBERON:0000065!4.79e-07!53;UBERON:0005256!5.08e-07!143;UBERON:0005156!5.87e-07!59;UBERON:0000990!5.87e-07!59;UBERON:0005911!7.84e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.30e-17,160;UBERON:0000925,2.30e-17,160;UBERON:0006595,2.30e-17,160;UBERON:0001007,7.98e-12,145;UBERON:0001555,7.98e-12,145;UBERON:0007026,7.98e-12,145;UBERON:0000483,4.01e-11,306;UBERON:0000119,1.43e-10,309;UBERON:0002100,1.49e-10,199;UBERON:0000922,1.62e-10,592;UBERON:0001004,2.12e-10,74;UBERON:0005423,9.35e-10,581;UBERON:0011216,2.02e-09,223;UBERON:0001008,2.95e-09,48;UBERON:0006554,3.67e-09,47;UBERON:0005631,7.40e-09,14;UBERON:0000158,7.40e-09,14;UBERON:0004111,3.08e-08,240;UBERON:0004921,9.51e-08,118;UBERON:0009569,1.05e-07,112;UBERON:0000915,1.18e-07,52;UBERON:0000161,1.27e-07,36;UBERON:0004923,1.66e-07,66;UBERON:0002050,1.75e-07,564;UBERON:0003102,2.72e-07,99;UBERON:0004121,3.74e-07,171;UBERON:0000924,3.74e-07,171;UBERON:0006601,3.74e-07,171;UBERON:0005156,5.54e-07,59;UBERON:0000990,5.54e-07,59;UBERON:0000065,5.91e-07,54;UBERON:0005157,5.92e-07,47 | |||
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|phase1_expression=9.08391896352783,5.78071414505655,8.45726424575827,8.00586386825043,7.59833860526389,27.0424942471114,20.2639902534648,2.52687949370732,4.17897005119742,139.822609869359,533.120092330935,215.82007566461,202.836806257681,7.1784484716827,12.2617029019329,1.34465029290355,0.602694528023977,0.730310090387373,0.975865597581014,16.7444638984432,27.7440940092184,47.3316629431913,19.1778111377808,16.4249310087461,14.6884888325919,0,0,0,0.393364276848904,0,4.64448369948228,76.3119616317509,74.3978619382278,82.4551442671936,0,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,3.35350429851818,21.0973227041825,45.9027723528399,12.5334477658972,16.3676566425731,5.5670016293577,32.117901439974,6.14476311566441,5.09977614163897,3.24988707064566,44.1399484427292,179.233281839931,129.032986088981,0,0,0,0,0,0,3.37896092523399,3.4409383804245,3.12426451446835,2.82653970962005,4.61449379830897,1.92582629358047,4.80688423034664,0.516833518338658,1.06729878806013,0,2.81980521976403,5.32190474002959,3.41686880567437,3.67663080345869,0.81014194788176,2.85759130509055,3.14341121676638,2.47745257063309,3.06633274931766,0,0.183201743930407,0,0,136.497438320613,31.3092329568051,32.4174109861324,16.1539200592127,110.432098988293,26.2454602826784,2.80338800071154,7.47242970107935,7.4000264525148,4.97937656639626,4.84958419450877,3.43269996538263,1.96764655938411,0,11.0131072961884,3.43376084513353,4.56377457235559,1.94283284717341,1.29177948508141,1.78060238804945,0.98315564691574,16.9447962141561,5.03620700978249,16.3254734257709,20.1960485737949,15.5778165445491,17.2930658768225,22.9957805381196,4.20840284885166,4.75450375513464,23.5504498161555,21.9488810440419,10.7270728529657,11.1176163590882,6.23877007380116,28.3435624388402,5.76604949810132,4.87443372666992,18.3055568611485,1.95799805553034,16.7466351029659,21.2173216218012,25.6540025006725,13.4463067122454,23.7287747789468,5.89119351310716,1.45481451136931,38.3410359917943,22.3669658065361,12.5474838309761,59.1378210679688,48.5488094651686,45.0283214760736,21.711319691068,25.1806559810822,20.4501339450352,12.1283434367983,20.4379889209259,18.9788226719432,3.12899064659632,1.92972281457866,4.14404764057442,2.3218396401599,18.7688665234092,19.4023152065344,17.5328077681226,14.2196507631254,15.8823320734647,18.5197527478545,13.2871546702214,21.0336840729856,24.1352402104176,13.4661504931237,0.738155454624648,22.4386838085513,41.5689751444714,42.6325263018072,0,0,2.95394953340702,0,55.4677857829442,1.20097467208968,50.2656307171505,106.781665594739,51.3703049023434,56.0160093209104,11.7290989911717,14.5590869939141,1.44331342025273,9.73815401790645,12.2105042005255,8.08452107462013,10.648666789262,4.18559134916116,115.369842102054,111.603201072333,0,0.234004265139238,0,27.1828118561653,76.4318683304811,48.4870832568962,50.3318897590007,33.4229029291056,46.3893041789906,0,0.176096868026452,3.93923419527467,10.6648765528551,14.3916374106073,1.14296209725904,0,0,11.9750712215894,1.13110241973656,0,0,1.68196626518041,1.30788020649984,0.66004457238855,5.94649892485778,10.7296933755565,0,11.9672152463192,14.5610411675913,17.2328940755635,38.2992656462851,17.3174416360465,23.8773249409106,10.8524321078289,35.3993344815731,0.325736184293735,23.8112605657506,24.5505080609363,7.53598442648965,7.84380112740265,17.595246448042,0,0,2.10833939483032,11.0227433526128,27.5668646001873,27.1010119577365,28.2323548001779,15.4107241912788,73.9521778180769,0,0,0,0,19.3111914409072,24.7265722329481,7.73288812777695,3.01529277601828,4.46557126157214,0.749007023947182,0,0,13.2506811056671,10.5035809422532,5.42530047399471,13.1021642764408,38.0053746137955,34.0637216473299,8.43418187947535,24.3766340779452,43.2074257706371,14.4862299809507,13.2845119707087,12.9058417979192,10.9473354229784,14.6850868097055,23.3337528191382,0,0,0,158.535719866394,223.023488944066,207.137350930831,29.7729369382532,17.0342790349749,16.8396056659844,18.1957591943095,16.8863392192012,11.2597744800525,37.1045166112477,4.78050050788232,5.14929003408069,6.57017248110473,2.59627214591811,5.694308544538,39.7627589156437,51.9311758085508,43.0939028219995,18.7147550508309,10.925470080403,10.7522020266728,183.638242453317,69.3908187310777,29.0209414595436,17.5367069583913,7.28306239360842,1.13733384070897,1.87103075804167,2.59099099322567,4.62681758070868,18.1534113154381,25.5861784665975,155.219650284428,230.208054473257,17.6861056230521,0,0,12.5660561307031,12.4645565365888,11.0628654185863,45.0289220900546,3.11336180382368,3.79543699634705,36.752994431755,32.5030123018261,40.1709824610399,23.8776674181541,1.84858340537573,2.91656981979646,8.1323577765873,11.4939662009053,12.6164523705379,5.71018403687876,25.4631621949669,60.328994106757,50.738177784388,66.7414486346675,56.4460417173969,10.2266020845403,104.517699147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| ||
|short_description=p2@SLC44A2 | |||
}} | }} |
Latest revision as of 02:24, 25 September 2015
Short description: | p2@SLC44A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC44A2_5end |
Coexpression cluster: | C3745_Alveolar_Renal_Placental_Amniotic_amniotic_choriocarcinoma_pancreatic |
Association with transcript: | 0bp_to_ENST00000380614_5end |
EntrezGene: | SLC44A2 |
HGNC: | 17292 |
UniProt: | E7ETY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.19e-16 | 253 |
endo-epithelial cell | 2.11e-10 | 42 |
extraembryonic cell | 8.28e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.30e-17 | 160 |
endoderm | 2.30e-17 | 160 |
presumptive endoderm | 2.30e-17 | 160 |
digestive system | 7.98e-12 | 145 |
digestive tract | 7.98e-12 | 145 |
primitive gut | 7.98e-12 | 145 |
epithelium | 4.01e-11 | 306 |
cell layer | 1.43e-10 | 309 |
trunk | 1.49e-10 | 199 |
embryo | 1.62e-10 | 592 |
respiratory system | 2.12e-10 | 74 |
developing anatomical structure | 9.35e-10 | 581 |
organ system subdivision | 2.02e-09 | 223 |
renal system | 2.95e-09 | 48 |
urinary system structure | 3.67e-09 | 47 |
extraembryonic membrane | 7.40e-09 | 14 |
membranous layer | 7.40e-09 | 14 |
anatomical conduit | 3.08e-08 | 240 |
subdivision of digestive tract | 9.51e-08 | 118 |
subdivision of trunk | 1.05e-07 | 112 |
thoracic segment of trunk | 1.18e-07 | 52 |
orifice | 1.27e-07 | 36 |
organ component layer | 1.66e-07 | 66 |
embryonic structure | 1.75e-07 | 564 |
surface structure | 2.72e-07 | 99 |
ectoderm-derived structure | 3.74e-07 | 171 |
ectoderm | 3.74e-07 | 171 |
presumptive ectoderm | 3.74e-07 | 171 |
reproductive structure | 5.54e-07 | 59 |
reproductive system | 5.54e-07 | 59 |
respiratory tract | 5.91e-07 | 54 |
epithelial fold | 5.92e-07 | 47 |