FFCP PHASE1:Hg19::chr19:18313411..18313422,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:18313411..18313422,- to FFCP PHASE1:Hg19::chr19:18313411..18313422,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5864 | |EntrezGene=5864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9777 | |HGNC=9777 | ||
|TSSclassifier=strong | |||
|UniProt=P20336 | |UniProt=P20336 | ||
|association_with_transcript=127bp_to_AB464121,AF498931,EU831985,EU832078_5end | |||
|cluster_id=chr19:18313411..18313422,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_8_at_RAB3A_5end | |||
|id=chr19:18313411..18313422,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002262;7.60e-07;2!CL:1000398;7.60e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,7.20e-07,2;CL:1000398,7.20e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.76e-16;3!UBERON:0006601;8.71e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.66e-37!94;UBERON:0001016!4.66e-37!94;UBERON:0001049!6.49e-37!57;UBERON:0005068!6.49e-37!57;UBERON:0006241!6.49e-37!57;UBERON:0007135!6.49e-37!57;UBERON:0005743!1.56e-36!86;UBERON:0001017!4.86e-35!82;UBERON:0002616!3.96e-33!59;UBERON:0000955!2.40e-32!69;UBERON:0006238!2.40e-32!69;UBERON:0002780!8.96e-31!41;UBERON:0001890!8.96e-31!41;UBERON:0006240!8.96e-31!41;UBERON:0003080!7.23e-30!42;UBERON:0001893!1.09e-29!34;UBERON:0002020!2.37e-29!34;UBERON:0003528!2.37e-29!34;UBERON:0002791!7.77e-28!33;UBERON:0003075!2.16e-27!86;UBERON:0007284!2.16e-27!86;UBERON:0002346!2.24e-27!90;UBERON:0001869!1.25e-26!32;UBERON:0002619!3.89e-26!22;UBERON:0001950!1.02e-25!20;UBERON:0003056!3.69e-23!61;UBERON:0000924!1.23e-22!173;UBERON:0006601!1.23e-22!173;UBERON:0000956!1.60e-22!25;UBERON:0000203!1.60e-22!25;UBERON:0004121!2.60e-22!169;UBERON:0007023!1.35e-21!115;UBERON:0000033!3.14e-19!123;UBERON:0000153!7.63e-19!129;UBERON:0007811!7.63e-19!129;UBERON:0001871!2.23e-10!7;UBERON:0000200!4.70e-10!6;UBERON:0002298!3.80e-09!8;UBERON:0000064!4.36e-09!219;UBERON:0004733!2.43e-08!12;UBERON:0002028!2.43e-08!12;UBERON:0007277!2.43e-08!12;UBERON:0003076!2.93e-08!15;UBERON:0003057!2.93e-08!15;UBERON:0002308!3.07e-08!9;UBERON:0000125!3.07e-08!9;UBERON:0001872!3.73e-08!5;UBERON:0002021!6.36e-08!5;UBERON:0002771!7.12e-08!3;UBERON:0000025!8.85e-08!194;UBERON:0004732!1.32e-07!13;UBERON:0000988!5.10e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.85e-51;20!UBERON:0001893;4.67e-49;34!UBERON:0001869;6.87e-49;32!UBERON:0002619;1.02e-46;22!UBERON:0002791;1.63e-42;32!UBERON:0000956;3.37e-41;25!UBERON:0000203;3.37e-41;25!UBERON:0003528;9.14e-39;34!UBERON:0002020;9.14e-39;34!UBERON:0002780;3.96e-27;41!UBERON:0001890;3.96e-27;41!UBERON:0000073;1.07e-23;53!UBERON:0002616;1.07e-23;53!UBERON:0001872;1.62e-20;5!UBERON:0000955;9.33e-19;68!UBERON:0001017;1.25e-17;75!UBERON:0000200;2.00e-17;6!UBERON:0001871;5.02e-15;6!UBERON:0001016;2.23e-13;83!UBERON:0002581;1.96e-12;1!UBERON:0002902;1.96e-12;1!UBERON:0001882;1.96e-12;1!UBERON:0002022;1.96e-12;1!UBERON:0001874;1.96e-12;1!UBERON:0009899;1.96e-12;1!UBERON:0007190;1.96e-12;1!UBERON:0005403;1.96e-12;1!UBERON:0000369;4.82e-12;4!UBERON:0002435;4.82e-12;4!UBERON:0000204;4.82e-12;4!UBERON:0002021;8.11e-10;5!UBERON:0007023;1.41e-08;114!UBERON:0002037;2.51e-08;6!UBERON:0009663;2.95e-07;7!UBERON:0002771;4.55e-07;2!UBERON:0001281;7.60e-07;2!UBERON:0003497;7.60e-07;2!UBERON:0003909;7.60e-07;2!UBERON:0003835;7.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.07e-54,32;UBERON:0001893,1.75e-51,34;UBERON:0001950,2.74e-51,20;UBERON:0002619,9.84e-47,22;UBERON:0002791,1.25e-46,32;UBERON:0000073,6.91e-44,53;UBERON:0002616,6.91e-44,53;UBERON:0003528,6.99e-44,34;UBERON:0002020,6.99e-44,34;UBERON:0002780,1.23e-42,41;UBERON:0001890,1.23e-42,41;UBERON:0003080,1.23e-42,41;UBERON:0006240,1.23e-42,41;UBERON:0001049,1.76e-41,56;UBERON:0005068,1.76e-41,56;UBERON:0006241,1.76e-41,56;UBERON:0007135,1.76e-41,56;UBERON:0000956,3.27e-41,25;UBERON:0000203,3.27e-41,25;UBERON:0000955,3.16e-38,68;UBERON:0006238,3.16e-38,68;UBERON:0001017,6.19e-32,81;UBERON:0001016,1.29e-28,89;UBERON:0003056,2.40e-28,61;UBERON:0003075,6.76e-28,82;UBERON:0007284,6.76e-28,82;UBERON:0002346,1.59e-26,86;UBERON:0010371,7.33e-25,104;UBERON:0001872,2.60e-20,5;UBERON:0007023,9.35e-20,114;UBERON:0010314,3.42e-19,132;UBERON:0000200,3.50e-17,6;UBERON:0004121,3.18e-16,171;UBERON:0000924,3.18e-16,171;UBERON:0006601,3.18e-16,171;UBERON:0001871,3.97e-15,6;UBERON:0001874,8.85e-13,1;UBERON:0002902,9.92e-13,1;UBERON:0009899,9.92e-13,1;UBERON:0000025,1.54e-12,192;UBERON:0001882,2.20e-12,1;UBERON:0005403,2.20e-12,1;UBERON:0002022,2.75e-12,1;UBERON:0002581,3.08e-12,1;UBERON:0000369,3.45e-12,4;UBERON:0002435,3.45e-12,4;UBERON:0000204,3.45e-12,4;UBERON:0010082,3.45e-12,4;UBERON:0007190,3.85e-12,1;UBERON:0011216,6.75e-12,223;UBERON:0002021,4.35e-10,5;UBERON:0004111,1.36e-09,240;UBERON:0002037,3.25e-08,6;UBERON:0006215,3.25e-08,6;UBERON:0000483,3.38e-08,306;UBERON:0000119,4.28e-08,309;UBERON:0009663,2.45e-07,7;UBERON:0002771,4.56e-07,2;UBERON:0001281,7.20e-07,2;UBERON:0003497,7.20e-07,2;UBERON:0003909,7.20e-07,2;UBERON:0003835,7.20e-07,2 | |||
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|short_description=p8@RAB3A | |||
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Latest revision as of 14:43, 16 September 2015
Short description: | p8@RAB3A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RAB3A_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 127bp_to_AB464121, AF498931, EU831985, EU832078_5end |
EntrezGene: | RAB3A |
HGNC: | 9777 |
UniProt: | P20336 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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endothelial cell of sinusoid | 7.20e-07 | 2 |
endothelial cell of hepatic sinusoid | 7.20e-07 | 2 |