FFCP PHASE1:Hg19::chr19:7805780..7805799,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:7805780..7805799,- to FFCP PHASE1:Hg19::chr19:7805780..7805799,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:7805780..7805799,- | |||
|coexpression_cluster_id=C3833 | |||
|description=CAGE_peak_at_chr19:7805780..7805799,- | |||
|id=chr19:7805780..7805799,- | |||
|ontology_enrichment_celltype=CL:0000235!6.62e-11!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.85e-33;6!CL:0000840;1.03e-19;5!CL:0002619;1.64e-17;3!CL:0000990;2.37e-13;8!CL:0000451;4.98e-11;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.10e-33,6;CL:0000840,1.04e-19,5;CL:0001029,1.04e-19,5;CL:0002619,1.39e-17,3;CL:0002194,7.05e-16,59;CL:0000576,7.05e-16,59;CL:0000040,7.05e-16,59;CL:0000559,7.05e-16,59;CL:0002009,2.47e-15,61;CL:0000839,4.08e-14,66;CL:0000557,6.81e-14,67;CL:0000990,2.37e-13,8;CL:0000766,7.14e-13,72;CL:0000451,4.98e-11,10;CL:0000763,2.83e-08,108;CL:0000049,2.83e-08,108;CL:0002087,1.04e-07,115;CL:0002031,2.40e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.72e-13;1!UBERON:0006965;1.59e-07;2 | |||
|ontology_enrichment_disease=DOID:1287!6.45e-07!4;DOID:114!8.32e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-23!115;UBERON:0004151!4.09e-10!3;UBERON:0002081!2.58e-07!2;UBERON:0000062!4.08e-07!511;UBERON:0000341!4.59e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;3.50e-14;1!UBERON:0002363;1.72e-13;1!UBERON:0002108;5.56e-11;4!UBERON:0002360;2.18e-07;2!UBERON:0000094;2.18e-07;2!UBERON:0010743;2.18e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.50e-14,1;UBERON:0002363,1.42e-13,1;UBERON:0007645,1.42e-13,1;UBERON:0007647,1.42e-13,1;UBERON:0010115,1.42e-13,1;UBERON:0002371,3.76e-12,76;UBERON:0002405,3.84e-12,93;UBERON:0001474,3.37e-11,82;UBERON:0002108,5.29e-11,4;UBERON:0002193,2.66e-10,108;UBERON:0004765,4.02e-10,90;UBERON:0002390,3.22e-09,98;UBERON:0003061,3.22e-09,98;UBERON:0001434,5.14e-09,100;UBERON:0002360,1.99e-07,2;UBERON:0000094,1.99e-07,2;UBERON:0010743,1.99e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91090116511902,0,2.06060454107349,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,3.8945687238562,4.70150290708022,13.2957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,2.00902836572851,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,1.51647791108371,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0.717873024576814,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0.414239055347196,7.93865634899121,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,3.27839340755936,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0.426467963801962,0.476128862927481,0.193766729508018,0.0620747142958579,0,0.12729431655633,0.202117188958219,0.435433495793923,0.342233301085281,0,0.358611026963382,0,0,0,0,0,0,0,0,0,2.01273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91090116511902,0,2.06060454107349,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,3.8945687238562,4.70150290708022,13.2957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,2.00902836572851,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,1.51647791108371,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0.717873024576814,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0.414239055347196,7.93865634899121,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,3.27839340755936,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0.426467963801962,0.476128862927481,0.193766729508018,0.0620747142958579,0,0.12729431655633,0.202117188958219,0.435433495793923,0.342233301085281,0,0.358611026963382,0,0,0,0,0,0,0,0,0,2.01273793591026,0 | ||
|short_description=p@chr19:7805780..7805799,- | |||
}} | }} |
Latest revision as of 18:31, 27 July 2015
Short description: | p@chr19:7805780..7805799, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:7805780..7805799, - |
Coexpression cluster: | C3833_Dendritic_lymph_dura_CD14_duodenum_vein_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.10e-33 | 6 |
immature conventional dendritic cell | 1.04e-19 | 5 |
common dendritic progenitor | 1.04e-19 | 5 |
adult endothelial progenitor cell | 1.39e-17 | 3 |
monopoietic cell | 7.05e-16 | 59 |
monocyte | 7.05e-16 | 59 |
monoblast | 7.05e-16 | 59 |
promonocyte | 7.05e-16 | 59 |
macrophage dendritic cell progenitor | 2.47e-15 | 61 |
myeloid lineage restricted progenitor cell | 4.08e-14 | 66 |
granulocyte monocyte progenitor cell | 6.81e-14 | 67 |
conventional dendritic cell | 2.37e-13 | 8 |
myeloid leukocyte | 7.14e-13 | 72 |
dendritic cell | 4.98e-11 | 10 |
myeloid cell | 2.83e-08 | 108 |
common myeloid progenitor | 2.83e-08 | 108 |
nongranular leukocyte | 1.04e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.40e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
lymph node | 3.50e-14 | 1 |
dura mater | 1.42e-13 | 1 |
future meninx | 1.42e-13 | 1 |
ectomeninx | 1.42e-13 | 1 |
future dura mater | 1.42e-13 | 1 |
bone marrow | 3.76e-12 | 76 |
immune system | 3.84e-12 | 93 |
bone element | 3.37e-11 | 82 |
small intestine | 5.29e-11 | 4 |
hemolymphoid system | 2.66e-10 | 108 |
skeletal element | 4.02e-10 | 90 |
hematopoietic system | 3.22e-09 | 98 |
blood island | 3.22e-09 | 98 |
skeletal system | 5.14e-09 | 100 |
meninx | 1.99e-07 | 2 |
membrane organ | 1.99e-07 | 2 |
meningeal cluster | 1.99e-07 | 2 |