FFCP PHASE1:Hg19::chr1:104068293..104068300,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:104068293..104068300,+ to FFCP PHASE1:Hg19::chr1:104068293..104068300,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55599 | |EntrezGene=55599 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18666 | |HGNC=18666 | ||
|TSSclassifier=strong | |||
|UniProt=A8K1C9 | |UniProt=A8K1C9 | ||
|association_with_transcript=-12bp_to_ENST00000524631_5end | |||
|cluster_id=chr1:104068293..104068300,+ | |||
|description=CAGE_peak_3_at_RNPC3_5end | |||
|id=chr1:104068293..104068300,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.87e-10!172;CL:0000566!6.87e-10!172;CL:0000988!4.00e-09!182;CL:0002032!9.63e-09!165;CL:0000837!9.63e-09!165;CL:0000738!1.14e-08!140;CL:0002031!3.86e-07!124;CL:0002087!7.87e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.15e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.17e-19!57;UBERON:0005068!1.17e-19!57;UBERON:0006241!1.17e-19!57;UBERON:0007135!1.17e-19!57;UBERON:0002780!2.79e-18!41;UBERON:0001890!2.79e-18!41;UBERON:0006240!2.79e-18!41;UBERON:0000955!4.85e-18!69;UBERON:0006238!4.85e-18!69;UBERON:0002616!1.06e-17!59;UBERON:0003080!3.20e-17!42;UBERON:0001017!6.15e-17!82;UBERON:0005743!3.44e-16!86;UBERON:0007023!2.37e-15!115;UBERON:0002020!2.68e-15!34;UBERON:0003528!2.68e-15!34;UBERON:0001893!4.77e-15!34;UBERON:0000073!1.19e-14!94;UBERON:0001016!1.19e-14!94;UBERON:0002791!1.23e-14!33;UBERON:0001869!3.25e-14!32;UBERON:0002619!4.71e-13!22;UBERON:0001950!6.88e-12!20;UBERON:0002346!1.91e-11!90;UBERON:0003075!5.69e-11!86;UBERON:0007284!5.69e-11!86;UBERON:0000956!2.39e-10!25;UBERON:0000203!2.39e-10!25;UBERON:0003056!4.13e-09!61;UBERON:0000153!1.02e-07!129;UBERON:0007811!1.02e-07!129;UBERON:0000033!2.42e-07!123;UBERON:0002420!9.57e-07!9;UBERON:0007245!9.57e-07!9;UBERON:0010009!9.57e-07!9;UBERON:0010011!9.57e-07!9;UBERON:0000454!9.57e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.46e-30;32!UBERON:0003528;3.27e-29;34!UBERON:0002020;3.27e-29;34!UBERON:0001893;4.38e-29;34!UBERON:0002791;6.59e-28;32!UBERON:0002780;1.26e-27;41!UBERON:0001890;1.26e-27;41!UBERON:0002619;8.10e-27;22!UBERON:0001950;5.45e-24;20!UBERON:0000956;5.83e-23;25!UBERON:0000203;5.83e-23;25!UBERON:0000073;9.40e-23;53!UBERON:0002616;9.40e-23;53!UBERON:0000955;3.91e-13;68!UBERON:0002420;2.41e-12;9!UBERON:0007245;2.41e-12;9!UBERON:0010009;2.41e-12;9!UBERON:0010011;2.41e-12;9!UBERON:0000454;2.41e-12;9!UBERON:0001017;2.75e-12;75!UBERON:0000125;5.79e-12;9!UBERON:0002308;5.79e-12;9!UBERON:0000200;1.07e-10;6!UBERON:0001016;1.47e-10;83!UBERON:0000349;2.19e-09;5!UBERON:0001871;2.72e-09;6!UBERON:0009663;3.66e-09;7!UBERON:0001872;9.54e-09;5!UBERON:0000369;1.71e-08;4!UBERON:0002435;1.71e-08;4!UBERON:0000204;1.71e-08;4!UBERON:0007023;1.94e-07;114!UBERON:0005383;7.52e-07;3!UBERON:0005382;7.52e-07;3 | |||
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| ||
|short_description=p3@RNPC3 | |||
}} | }} |
Latest revision as of 06:35, 25 September 2015
Short description: | p3@RNPC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RNPC3_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000524631_5end |
EntrezGene: | RNPC3 |
HGNC: | 18666 |
UniProt: | A8K1C9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data