FFCP PHASE1:Hg19::chr1:2398876..2398928,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:2398876..2398928,+ to FFCP PHASE1:Hg19::chr1:2398876..2398928,+: NSchange) |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9651 | |EntrezGene=9651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29037 | |HGNC=29037 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000449969,ENST00000498669_5end | |||
|cluster_id=chr1:2398876..2398928,+ | |||
|coexpression_cluster_id=C118 | |||
|description=CAGE_peak_1_at_PLCH2_5end | |||
|id=chr1:2398876..2398928,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000307;8.08e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.07e-07,3;CL:0000069,1.07e-07,3;CL:0000307,1.07e-07,3;CL:0000377,1.07e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.94e-16;82!UBERON:0006215;7.72e-10;3!CL:0000377;8.08e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.43e-46!82;UBERON:0005743!2.81e-45!86;UBERON:0000073!2.22e-44!94;UBERON:0001016!2.22e-44!94;UBERON:0001049!1.43e-43!57;UBERON:0005068!1.43e-43!57;UBERON:0006241!1.43e-43!57;UBERON:0007135!1.43e-43!57;UBERON:0000955!8.31e-39!69;UBERON:0006238!8.31e-39!69;UBERON:0002616!1.04e-35!59;UBERON:0003075!3.81e-35!86;UBERON:0007284!3.81e-35!86;UBERON:0002780!3.85e-34!41;UBERON:0001890!3.85e-34!41;UBERON:0006240!3.85e-34!41;UBERON:0003080!4.73e-33!42;UBERON:0002346!8.97e-33!90;UBERON:0004121!2.43e-32!169;UBERON:0000033!3.08e-31!123;UBERON:0000924!5.02e-31!173;UBERON:0006601!5.02e-31!173;UBERON:0000153!6.47e-31!129;UBERON:0007811!6.47e-31!129;UBERON:0007023!9.97e-29!115;UBERON:0003056!2.80e-28!61;UBERON:0001893!6.37e-28!34;UBERON:0002020!1.68e-27!34;UBERON:0003528!1.68e-27!34;UBERON:0002791!1.27e-26!33;UBERON:0001869!4.29e-26!32;UBERON:0002619!3.83e-24!22;UBERON:0001950!2.62e-21!20;UBERON:0000956!1.65e-20!25;UBERON:0000203!1.65e-20!25;UBERON:0000064!1.30e-12!219;UBERON:0003076!2.20e-11!15;UBERON:0003057!2.20e-11!15;UBERON:0000477!5.37e-11!286;UBERON:0001737!1.25e-10!9;UBERON:0000481!3.62e-10!347;UBERON:0000200!8.16e-10!6;UBERON:0000062!1.21e-09!511;UBERON:0000922!2.29e-09!612;UBERON:0001871!2.64e-09!7;UBERON:0002420!4.63e-09!9;UBERON:0007245!4.63e-09!9;UBERON:0010009!4.63e-09!9;UBERON:0010011!4.63e-09!9;UBERON:0000454!4.63e-09!9;UBERON:0000475!4.74e-09!365;UBERON:0000349!1.24e-08!5;UBERON:0004733!1.78e-08!12;UBERON:0002028!1.78e-08!12;UBERON:0007277!1.78e-08!12;UBERON:0002308!2.08e-08!9;UBERON:0000125!2.08e-08!9;UBERON:0000063!2.76e-08!97;UBERON:0000923!3.80e-08!604;UBERON:0005291!3.80e-08!604;UBERON:0006598!3.80e-08!604;UBERON:0002532!3.80e-08!604;UBERON:0002050!4.44e-08!605;UBERON:0005423!4.44e-08!605;UBERON:0000119!7.77e-08!312;UBERON:0000025!7.81e-08!194;UBERON:0000467!1.12e-07!625;UBERON:0004732!1.18e-07!13;UBERON:0000480!1.30e-07!626;UBERON:0001894!1.35e-07!7;UBERON:0006222!1.35e-07!7;UBERON:0000065!1.53e-07!53;UBERON:0008947!1.55e-07!38;UBERON:0003258!1.55e-07!38;UBERON:0002680!2.33e-07!9;UBERON:0001895!2.33e-07!9;UBERON:0010092!2.33e-07!9;UBERON:0004111!2.91e-07!241;UBERON:0000483!3.03e-07!309;UBERON:0001004!7.12e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.54e-40;22!UBERON:0002780;3.97e-36;41!UBERON:0001890;3.97e-36;41!UBERON:0001893;7.47e-35;34!UBERON:0001869;8.33e-35;32!UBERON:0001950;1.09e-34;20!UBERON:0000956;1.49e-34;25!UBERON:0000203;1.49e-34;25!UBERON:0002791;2.85e-31;32!UBERON:0000073;1.90e-30;53!UBERON:0002616;1.90e-30;53!UBERON:0003528;5.70e-29;34!UBERON:0002020;5.70e-29;34!UBERON:0000955;5.14e-24;68!UBERON:0001017;8.05e-23;75!UBERON:0001016;7.37e-20;83!UBERON:0000200;1.59e-16;6!UBERON:0000349;2.33e-14;5!UBERON:0001894;6.83e-13;7!UBERON:0001871;4.71e-10;6!UBERON:0007023;8.58e-10;114!UBERON:0001872;2.49e-09;5!UBERON:0001870;3.74e-09;3!UBERON:0002021;5.31e-09;5!UBERON:0011216;3.65e-08;132!UBERON:0002420;4.54e-07;9!UBERON:0007245;4.54e-07;9!UBERON:0010009;4.54e-07;9!UBERON:0010011;4.54e-07;9!UBERON:0000454;4.54e-07;9!UBERON:0001954;5.88e-07;2!UBERON:0003022;5.88e-07;2!UBERON:0002421;5.88e-07;2!UBERON:0002600;5.88e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.56e-53,89;UBERON:0000073,5.51e-53,53;UBERON:0002616,5.51e-53,53;UBERON:0001049,1.49e-52,56;UBERON:0005068,1.49e-52,56;UBERON:0006241,1.49e-52,56;UBERON:0007135,1.49e-52,56;UBERON:0000955,1.55e-52,68;UBERON:0006238,1.55e-52,68;UBERON:0001017,2.39e-52,81;UBERON:0002780,1.47e-50,41;UBERON:0001890,1.47e-50,41;UBERON:0003080,1.47e-50,41;UBERON:0006240,1.47e-50,41;UBERON:0003075,8.82e-42,82;UBERON:0007284,8.82e-42,82;UBERON:0003056,1.65e-41,61;UBERON:0002619,7.96e-40,22;UBERON:0002346,2.46e-39,86;UBERON:0001893,3.41e-39,34;UBERON:0001869,1.24e-38,32;UBERON:0002791,4.38e-35,32;UBERON:0001950,1.01e-34,20;UBERON:0000956,1.41e-34,25;UBERON:0000203,1.41e-34,25;UBERON:0010371,2.36e-34,104;UBERON:0003528,1.04e-32,34;UBERON:0002020,1.04e-32,34;UBERON:0004121,3.67e-30,171;UBERON:0000924,3.67e-30,171;UBERON:0006601,3.67e-30,171;UBERON:0007023,1.13e-27,114;UBERON:0011216,1.39e-26,223;UBERON:0010314,3.27e-26,132;UBERON:0000200,1.64e-16,6;UBERON:0000349,2.24e-14,5;UBERON:0001894,7.15e-13,7;UBERON:0006222,7.15e-13,7;UBERON:0000025,5.24e-11,192;UBERON:0001871,4.55e-10,6;UBERON:0001872,2.41e-09,5;UBERON:0001870,3.96e-09,3;UBERON:0002021,5.05e-09,5;UBERON:0000119,1.04e-07,309;UBERON:0000483,2.31e-07,306;UBERON:0002050,2.43e-07,564;UBERON:0000922,2.57e-07,592;UBERON:0002420,4.54e-07,9;UBERON:0007245,4.54e-07,9;UBERON:0010009,4.54e-07,9;UBERON:0010011,4.54e-07,9;UBERON:0000454,4.54e-07,9;UBERON:0004111,5.80e-07,240;UBERON:0000923,5.93e-07,560;UBERON:0010316,5.93e-07,560;UBERON:0005291,5.93e-07,560;UBERON:0006598,5.93e-07,560;UBERON:0010317,5.93e-07,560;UBERON:0002532,5.93e-07,560;UBERON:0001954,5.97e-07,2;UBERON:0003022,5.97e-07,2;UBERON:0002421,5.97e-07,2;UBERON:0002600,5.97e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,6.6265302131215,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604820229674197,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,3.6019245761871,0.364295288292542,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0.709840800239063,1.01150814046861,1.68707720918437,0.441175890929576,0.435758888184812,0.949082476444386,1.34831308160164,0.392442930250692,1.92373578473195,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,4.0738915869753,0,0,0,1.39116485970092,0,0,0.462985512576611,0,0,0,0,0,0,4.68669169933885,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.897048674762886,0,1.10007428731425,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513372145118994,0,0,1.54657762555539,0.837581326671744,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46143819627044,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.661139661443912,1.34533047155574,3.1903178123646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79044126903985,1.34060455107157,1.08890984861323,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9356241254293,7.17414023693615,0,0,0,0.19924798825107,0,0.755798243562828,0,0,0,0.179736702294654,0,0,0,0,0,27.1413168906661,3.33965153382665,3.99227596002388,0,0,0,3.18621655199399,0,0.236387681767936,10.3423011972439,0,1.38899995946634,1.77148277162768,1.08536794762867,24.4130778107333,35.6065216978543,56.154047601174,6.80094731177315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.265372693510018,0,0,0,0,1.41542379259422,0,4.68528891450678,0,0,0,0.394584402849391,0,0.91821828489147,0.189559738885464,0,0,0.664653872707185,0,1.56966459203613,0,0.284609546029793,0,0,0,0,1.92199335066233,0,0,0,0,0,0.0882561266915003,12.6549214837098,0,0,19.0565495827195,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,31.8091875923721,12.3945099561534,0.160753148465019,0.137539436597234,0,0,0,21.1408457169926,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.775697738169303,0.79339561045614,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,8.86068179966986,11.7145214305885,6.13435560461849,0,2.5513681853476,0.807253238237985,14.5266066683042,0.37494122388632,0,0,0,1.87333962322753,4.34763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.05118024373827,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,3.19735928259129,2.372145850727,0,2.18419276384028,0,0,0,0,0,0,0,0,0,9.24900841389017,2.8339315265117,3.19267718114303,11.0762836690008,0,15.3529100470564,9.04263615538366,0,0,0,0,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0,0,9.18511150810167,9.37293718336617,6.40729069153671,11.2880142145154,0,0.548257766857182,0,0,0,0,3.02655349996942,1.82089681270989,2.04895972216168,0,0,0,2.7867590520501,14.798874051641,0.118193840883968,0,0,0,0,0,0,0,10.0781927289085,36.8171715337253,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,17.0407800955415,0.150962843566674,0,0,0,0,0,0.785233868459781,0.891139200981258,1.2679671827502,0,0,0,0,0,0,0.401206833445841,0,0,0.143339583151451,1.57771562193185,25.0208683902566,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.803892390468535,14.0958804707992,2.0686599172379,0,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,1.61693751166575,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,6.6265302131215,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604820229674197,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,3.6019245761871,0.364295288292542,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0.709840800239063,1.01150814046861,1.68707720918437,0.441175890929576,0.435758888184812,0.949082476444386,1.34831308160164,0.392442930250692,1.92373578473195,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,4.0738915869753,0,0,0,1.39116485970092,0,0,0.462985512576611,0,0,0,0,0,0,4.68669169933885,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.897048674762886,0,1.10007428731425,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513372145118994,0,0,1.54657762555539,0.837581326671744,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46143819627044,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.661139661443912,1.34533047155574,3.1903178123646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79044126903985,1.34060455107157,1.08890984861323,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9356241254293,7.17414023693615,0,0,0,0.19924798825107,0,0.755798243562828,0,0,0,0.179736702294654,0,0,0,0,0,27.1413168906661,3.33965153382665,3.99227596002388,0,0,0,3.18621655199399,0,0.236387681767936,10.3423011972439,0,1.38899995946634,1.77148277162768,1.08536794762867,24.4130778107333,35.6065216978543,56.154047601174,6.80094731177315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.265372693510018,0,0,0,0,1.41542379259422,0,4.68528891450678,0,0,0,0.394584402849391,0,0.91821828489147,0.189559738885464,0,0,0.664653872707185,0,1.56966459203613,0,0.284609546029793,0,0,0,0,1.92199335066233,0,0,0,0,0,0.0882561266915003,12.6549214837098,0,0,19.0565495827195,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,31.8091875923721,12.3945099561534,0.160753148465019,0.137539436597234,0,0,0,21.1408457169926,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.775697738169303,0.79339561045614,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,8.86068179966986,11.7145214305885,6.13435560461849,0,2.5513681853476,0.807253238237985,14.5266066683042,0.37494122388632,0,0,0,1.87333962322753,4.34763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.05118024373827,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,3.19735928259129,2.372145850727,0,2.18419276384028,0,0,0,0,0,0,0,0,0,9.24900841389017,2.8339315265117,3.19267718114303,11.0762836690008,0,15.3529100470564,9.04263615538366,0,0,0,0,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0,0,9.18511150810167,9.37293718336617,6.40729069153671,11.2880142145154,0,0.548257766857182,0,0,0,0,3.02655349996942,1.82089681270989,2.04895972216168,0,0,0,2.7867590520501,14.798874051641,0.118193840883968,0,0,0,0,0,0,0,10.0781927289085,36.8171715337253,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,17.0407800955415,0.150962843566674,0,0,0,0,0,0.785233868459781,0.891139200981258,1.2679671827502,0,0,0,0,0,0,0.401206833445841,0,0,0.143339583151451,1.57771562193185,25.0208683902566,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.803892390468535,14.0958804707992,2.0686599172379,0,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,1.61693751166575,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@PLCH2 | |||
}} | }} |
Latest revision as of 16:30, 16 September 2015
Short description: | p1@PLCH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLCH2_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 0bp_to_ENST00000449969, ENST00000498669_5end |
EntrezGene: | PLCH2 |
HGNC: | 29037 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.07e-07 | 3 |
branched duct epithelial cell | 1.07e-07 | 3 |
tracheal epithelial cell | 1.07e-07 | 3 |
tracheoblast | 1.07e-07 | 3 |