FFCP PHASE1:Hg19::chr1:50489619..50489650,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:50489619..50489650,- to FFCP PHASE1:Hg19::chr1:50489619..50489650,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84871 | |EntrezGene=84871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25892 | |HGNC=25892 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VU57,B1AMW3 | |UniProt=Q5VU57,B1AMW3 | ||
|association_with_transcript=0bp_to_NM_032785,uc001cru.2,uc010omw.1,uc010omx.1_5end | |||
|cluster_id=chr1:50489619..50489650,- | |||
|coexpression_cluster_id=C257 | |||
|description=CAGE_peak_2_at_AGBL4_5end | |||
|id=chr1:50489619..50489650,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.41e-19;82!UBERON:0006241;6.05e-07;3!UBERON:0003057;6.05e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.12e-56!115;UBERON:0001049!1.17e-53!57;UBERON:0005068!1.17e-53!57;UBERON:0006241!1.17e-53!57;UBERON:0007135!1.17e-53!57;UBERON:0002346!7.85e-48!90;UBERON:0003075!2.41e-46!86;UBERON:0007284!2.41e-46!86;UBERON:0005743!1.31e-45!86;UBERON:0001017!3.58e-45!82;UBERON:0000073!6.12e-45!94;UBERON:0001016!6.12e-45!94;UBERON:0002616!1.15e-44!59;UBERON:0000955!1.57e-43!69;UBERON:0006238!1.57e-43!69;UBERON:0002780!3.48e-42!41;UBERON:0001890!3.48e-42!41;UBERON:0006240!3.48e-42!41;UBERON:0003080!7.72e-41!42;UBERON:0001893!8.25e-34!34;UBERON:0002020!1.36e-33!34;UBERON:0003528!1.36e-33!34;UBERON:0003056!1.32e-32!61;UBERON:0002791!1.81e-32!33;UBERON:0001869!4.18e-32!32;UBERON:0000924!3.43e-28!173;UBERON:0006601!3.43e-28!173;UBERON:0000033!1.03e-27!123;UBERON:0000153!1.15e-27!129;UBERON:0007811!1.15e-27!129;UBERON:0004121!9.25e-27!169;UBERON:0002619!3.48e-26!22;UBERON:0000956!4.94e-24!25;UBERON:0000203!4.94e-24!25;UBERON:0001950!6.07e-24!20;UBERON:0003076!1.69e-13!15;UBERON:0003057!1.69e-13!15;UBERON:0000025!3.08e-13!194;UBERON:0004111!2.09e-11!241;UBERON:0002420!3.01e-11!9;UBERON:0007245!3.01e-11!9;UBERON:0010009!3.01e-11!9;UBERON:0010011!3.01e-11!9;UBERON:0000454!3.01e-11!9;UBERON:0002308!5.56e-11!9;UBERON:0000125!5.56e-11!9;UBERON:0004733!1.29e-10!12;UBERON:0002028!1.29e-10!12;UBERON:0007277!1.29e-10!12;UBERON:0001894!9.60e-10!7;UBERON:0006222!9.60e-10!7;UBERON:0004732!1.45e-09!13;UBERON:0000477!2.64e-09!286;UBERON:0000200!3.30e-09!6;UBERON:0009663!7.36e-09!7;UBERON:0000483!1.56e-08!309;UBERON:0001871!1.66e-08!7;UBERON:0000119!3.03e-08!312;UBERON:0000062!6.72e-08!511;UBERON:0000064!1.24e-07!219;UBERON:0002298!1.41e-07!8;UBERON:0002021!1.57e-07!5;UBERON:0001872!1.61e-07!5;UBERON:0000349!1.63e-07!5;UBERON:0002680!2.01e-07!9;UBERON:0001895!2.01e-07!9;UBERON:0010092!2.01e-07!9;UBERON:0000481!3.60e-07!347;UBERON:0000475!4.52e-07!365;UBERON:0003296!8.32e-07!4;UBERON:0010133!8.32e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.35e-43;41!UBERON:0001890;6.35e-43;41!UBERON:0001893;5.08e-41;34!UBERON:0001869;1.02e-40;32!UBERON:0002619;3.20e-40;22!UBERON:0003528;4.35e-40;34!UBERON:0002020;4.35e-40;34!UBERON:0000073;2.05e-38;53!UBERON:0002616;2.05e-38;53!UBERON:0002791;1.18e-37;32!UBERON:0001950;4.79e-36;20!UBERON:0000956;7.17e-35;25!UBERON:0000203;7.17e-35;25!UBERON:0000955;4.06e-27;68!UBERON:0001017;6.76e-25;75!UBERON:0001016;6.79e-21;83!UBERON:0007023;6.79e-17;114!UBERON:0001894;9.92e-17;7!UBERON:0000200;1.26e-15;6!UBERON:0002298;6.69e-14;6!UBERON:0002420;7.18e-13;9!UBERON:0007245;7.18e-13;9!UBERON:0010009;7.18e-13;9!UBERON:0010011;7.18e-13;9!UBERON:0000454;7.18e-13;9!UBERON:0001872;9.95e-13;5!UBERON:0000349;1.33e-12;5!UBERON:0000125;2.20e-12;9!UBERON:0002308;2.20e-12;9!UBERON:0003296;2.71e-11;4!UBERON:0010133;2.71e-11;4!UBERON:0000369;1.57e-10;4!UBERON:0002435;1.57e-10;4!UBERON:0000204;1.57e-10;4!UBERON:0002784;4.16e-10;4!UBERON:0001871;2.90e-09;6!UBERON:0002021;6.22e-09;5!UBERON:0009663;8.15e-09;7!UBERON:0010314;1.05e-08;132!UBERON:0004733;1.15e-08;12!UBERON:0002028;1.15e-08;12!UBERON:0001870;2.14e-08;3!UBERON:0005383;3.90e-08;3!UBERON:0005382;3.90e-08;3!UBERON:0011216;3.95e-08;132!UBERON:0004732;6.46e-08;13!UBERON:0001896;8.00e-08;3!UBERON:0005290;8.00e-08;3!UBERON:0000988;9.55e-08;3!UBERON:0002240;6.05e-07;3!UBERON:0005174;6.05e-07;3!UBERON:0001137;6.05e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.47e-73,56;UBERON:0005068,1.47e-73,56;UBERON:0006241,1.47e-73,56;UBERON:0007135,1.47e-73,56;UBERON:0000073,6.16e-68,53;UBERON:0002616,6.16e-68,53;UBERON:0002780,1.91e-61,41;UBERON:0001890,1.91e-61,41;UBERON:0003080,1.91e-61,41;UBERON:0006240,1.91e-61,41;UBERON:0001017,5.90e-59,81;UBERON:0000955,8.89e-58,68;UBERON:0006238,8.89e-58,68;UBERON:0003075,1.70e-56,82;UBERON:0007284,1.70e-56,82;UBERON:0007023,2.19e-53,114;UBERON:0002346,2.94e-53,86;UBERON:0001016,8.33e-52,89;UBERON:0001893,1.79e-46,34;UBERON:0001869,3.60e-46,32;UBERON:0003528,3.99e-46,34;UBERON:0002020,3.99e-46,34;UBERON:0010371,6.56e-44,104;UBERON:0003056,2.45e-43,61;UBERON:0002791,3.12e-42,32;UBERON:0002619,3.65e-40,22;UBERON:0010314,4.30e-40,132;UBERON:0001950,4.80e-36,20;UBERON:0000956,8.04e-35,25;UBERON:0000203,8.04e-35,25;UBERON:0004121,5.99e-26,171;UBERON:0000924,5.99e-26,171;UBERON:0006601,5.99e-26,171;UBERON:0000025,9.68e-21,192;UBERON:0011216,1.83e-18,223;UBERON:0001894,1.10e-16,7;UBERON:0006222,1.10e-16,7;UBERON:0000200,1.08e-15,6;UBERON:0004111,1.13e-14,240;UBERON:0002298,4.79e-14,6;UBERON:0003076,1.99e-13,15;UBERON:0003057,1.99e-13,15;UBERON:0002420,6.00e-13,9;UBERON:0007245,6.00e-13,9;UBERON:0010009,6.00e-13,9;UBERON:0010011,6.00e-13,9;UBERON:0000454,6.00e-13,9;UBERON:0001872,1.40e-12,5;UBERON:0000349,1.44e-12,5;UBERON:0000125,1.49e-12,9;UBERON:0002308,1.49e-12,9;UBERON:0000483,2.74e-11,306;UBERON:0003296,2.86e-11,4;UBERON:0010133,2.86e-11,4;UBERON:0000119,4.80e-11,309;UBERON:0000369,1.34e-10,4;UBERON:0002435,1.34e-10,4;UBERON:0000204,1.34e-10,4;UBERON:0010082,1.34e-10,4;UBERON:0002784,4.81e-10,4;UBERON:0001871,2.56e-09,6;UBERON:0002021,6.43e-09,5;UBERON:0009663,7.58e-09,7;UBERON:0004733,8.71e-09,12;UBERON:0002028,8.71e-09,12;UBERON:0007277,8.71e-09,12;UBERON:0001870,1.78e-08,3;UBERON:0005383,3.14e-08,3;UBERON:0005382,3.14e-08,3;UBERON:0004732,5.02e-08,13;UBERON:0000988,6.63e-08,3;UBERON:0001896,8.21e-08,3;UBERON:0005290,8.21e-08,3;UBERON:0010096,8.21e-08,3;UBERON:0002240,4.81e-07,3;UBERON:0005174,4.81e-07,3;UBERON:0001137,4.81e-07,3 | |||
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| ||
|short_description=p2@AGBL4 | |||
}} | }} |
Latest revision as of 10:44, 18 September 2015
Short description: | p2@AGBL4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AGBL4_5end |
Coexpression cluster: | C257_pineal_insula_frontal_occipital_temporal_medial_paracentral |
Association with transcript: | 0bp_to_NM_032785, uc001cru.2, uc010omw.1, uc010omx.1_5end |
EntrezGene: | AGBL4 |
HGNC: | 25892 |
UniProt: | Q5VU57B1AMW3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data