FFCP PHASE1:Hg19::chr22:19747040..19747054,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6899 | |EntrezGene=6899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11592 | |HGNC=11592 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-110bp_to_GU014843_5end | |||
|cluster_id=chr22:19747040..19747054,+ | |||
|description=CAGE_peak_3_at_TBX1_5end | |||
|id=chr22:19747040..19747054,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.37e-25!24;CL:0000115!1.12e-15!35;CL:0000071!1.47e-14!18;CL:0002546!1.47e-14!18;CL:0005020!7.49e-14!6;CL:0002138!7.49e-14!6;CL:0005022!7.49e-14!6;CL:0002078!5.76e-13!44;CL:0000213!4.89e-10!57;CL:0000215!4.89e-10!57;CL:0002368!1.15e-08!13;CL:0002543!5.95e-08!6;CL:0002144!7.04e-08!3;CL:0000076!3.17e-07!62;CL:0000066!3.61e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.90e-48;24!CL:0002138;7.68e-43;6!CL:0000115;4.63e-25;36!CL:0002078;7.60e-23;45!CL:0002144;1.26e-22;3!CL:0000071;7.12e-19;18!CL:0000213;5.62e-13;58!CL:0000215;5.62e-13;58!CL:1000413;9.46e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.04e-48,24;CL:0005020,1.38e-42,6;CL:0002138,1.38e-42,6;CL:0005022,1.38e-42,6;CL:0000115,3.11e-31,36;CL:0002078,1.84e-28,45;CL:0000213,7.35e-25,58;CL:0000215,7.35e-25,58;CL:0002144,1.36e-22,3;CL:0000071,8.41e-19,18;CL:0002546,8.41e-19,18;CL:0000222,4.79e-12,121;CL:0000066,1.29e-09,253;CL:0000076,6.51e-08,63;CL:1000413,1.08e-07,9 | |||
|ontology_enrichment_development_v019=CL:0005022;7.68e-43;6!CL:0002546;7.12e-19;18!UBERON:0004874;2.20e-08;1!UBERON:0008947;2.52e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.07e-18!9;UBERON:0001986!1.47e-14!18;UBERON:0004638!1.47e-14!18;UBERON:0004852!1.47e-14!18;UBERON:0001557!1.09e-13!19;UBERON:0006914!1.96e-13!25;UBERON:0000487!2.09e-13!22;UBERON:0000065!5.48e-13!53;UBERON:0000055!4.69e-12!69;UBERON:0000072!2.12e-11!46;UBERON:0002049!9.09e-11!79;UBERON:0007798!9.09e-11!79;UBERON:0008947!3.09e-10!38;UBERON:0003258!3.09e-10!38;UBERON:0001473!3.94e-10!8;UBERON:0004536!3.94e-10!8;UBERON:0006558!3.94e-10!8;UBERON:0001004!7.82e-10!72;UBERON:0002465!6.69e-08!10;UBERON:0001915!7.04e-08!3;UBERON:0001982!7.04e-08!3;UBERON:0001981!2.82e-07!60;UBERON:0007500!2.82e-07!60;UBERON:0004537!2.82e-07!60;UBERON:0006965!2.82e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;4.81e-32;8!UBERON:0004536;4.81e-32;8!UBERON:0006558;4.81e-32;8!UBERON:0001737;7.29e-28;9!UBERON:0001557;7.29e-28;9!UBERON:0002465;1.47e-25;10!UBERON:0010523;1.26e-22;3!UBERON:0001915;1.26e-22;3!UBERON:0001982;1.26e-22;3!UBERON:0004638;7.12e-19;18!UBERON:0001986;7.12e-19;18!UBERON:0004852;7.12e-19;18!UBERON:0006914;2.53e-17;25!UBERON:0000487;2.67e-15;22!UBERON:0000055;7.04e-11;65!UBERON:0000490;1.08e-09;33!UBERON:0002405;3.68e-09;27!UBERON:0002049;6.45e-09;75!UBERON:0007798;6.45e-09;75!UBERON:0000989;2.20e-08;1!UBERON:0008811;2.20e-08;1!UBERON:0003915;9.46e-08;9!UBERON:0004700;9.46e-08;9!UBERON:0001917;9.46e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,7.45e-32,8;UBERON:0004536,7.45e-32,8;UBERON:0006558,7.45e-32,8;UBERON:0001737,8.45e-28,9;UBERON:0002465,2.09e-25,10;UBERON:0010523,1.36e-22,3;UBERON:0001915,1.36e-22,3;UBERON:0001982,1.36e-22,3;UBERON:0004638,8.41e-19,18;UBERON:0001986,8.41e-19,18;UBERON:0004852,8.41e-19,18;UBERON:0006914,3.35e-17,25;UBERON:0000055,2.09e-15,68;UBERON:0002049,2.35e-15,78;UBERON:0007798,2.35e-15,78;UBERON:0000487,3.06e-15,22;UBERON:0001557,6.11e-13,19;UBERON:0004535,3.07e-10,109;UBERON:0001009,6.78e-10,112;UBERON:0000989,1.18e-08,1;UBERON:0008811,1.18e-08,1;UBERON:0006258,1.18e-08,1;UBERON:0005876,1.18e-08,1;UBERON:0004874,1.18e-08,1;UBERON:0003915,1.08e-07,9;UBERON:0004700,1.08e-07,9;UBERON:0001917,1.08e-07,9 | |||
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| ||
|short_description=p3@TBX1 | |||
}} | }} |
Latest revision as of 03:33, 19 September 2015
Short description: | p3@TBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TBX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -110bp_to_GU014843_5end |
EntrezGene: | TBX1 |
HGNC: | 11592 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.04e-48 | 24 |
lymphangioblast | 1.38e-42 | 6 |
endothelial cell of lymphatic vessel | 1.38e-42 | 6 |
vascular lymphangioblast | 1.38e-42 | 6 |
endothelial cell | 3.11e-31 | 36 |
meso-epithelial cell | 1.84e-28 | 45 |
lining cell | 7.35e-25 | 58 |
barrier cell | 7.35e-25 | 58 |
capillary endothelial cell | 1.36e-22 | 3 |
blood vessel endothelial cell | 8.41e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.41e-19 | 18 |
mesodermal cell | 4.79e-12 | 121 |
epithelial cell | 1.29e-09 | 253 |
squamous epithelial cell | 6.51e-08 | 63 |
endothelial cell of artery | 1.08e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 7.45e-32 | 8 |
lymph vasculature | 7.45e-32 | 8 |
lymphatic part of lymphoid system | 7.45e-32 | 8 |
larynx | 8.45e-28 | 9 |
lymphoid system | 2.09e-25 | 10 |
microcirculatory vessel | 1.36e-22 | 3 |
endothelium of capillary | 1.36e-22 | 3 |
capillary | 1.36e-22 | 3 |
blood vessel endothelium | 8.41e-19 | 18 |
endothelium | 8.41e-19 | 18 |
cardiovascular system endothelium | 8.41e-19 | 18 |
squamous epithelium | 3.35e-17 | 25 |
vessel | 2.09e-15 | 68 |
vasculature | 2.35e-15 | 78 |
vascular system | 2.35e-15 | 78 |
simple squamous epithelium | 3.06e-15 | 22 |
upper respiratory tract | 6.11e-13 | 19 |
cardiovascular system | 3.07e-10 | 109 |
circulatory system | 6.78e-10 | 112 |
penis | 1.18e-08 | 1 |
intromittent organ | 1.18e-08 | 1 |
lateral plate mesenchyme | 1.18e-08 | 1 |
undifferentiated genital tubercle | 1.18e-08 | 1 |
somatopleure | 1.18e-08 | 1 |
endothelial tube | 1.08e-07 | 9 |
arterial system endothelium | 1.08e-07 | 9 |
endothelium of artery | 1.08e-07 | 9 |