FFCP PHASE1:Hg19::chr2:56145014..56145064,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:56145014..56145064,+ to FFCP PHASE1:Hg19::chr2:56145014..56145064,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:56145014..56145064,+ | |||
|coexpression_cluster_id=C395 | |||
|description=CAGE_peak_at_chr2:56145014..56145064,+ | |||
|id=chr2:56145014..56145064,+ | |||
|ontology_enrichment_celltype=CL:0000222!6.17e-26!119;CL:0000213!2.86e-17!57;CL:0000215!2.86e-17!57;CL:0002139!7.05e-17!24;CL:0000055!2.55e-15!180;CL:0000220!2.85e-15!246;CL:0002321!9.84e-15!248;CL:0000071!1.12e-12!18;CL:0002546!1.12e-12!18;CL:0002078!3.43e-12!44;CL:0000076!6.10e-12!62;CL:0000115!1.61e-11!35;CL:0000680!5.14e-11!57;CL:0000056!5.14e-11!57;CL:0000355!5.14e-11!57;CL:0000187!6.18e-11!54;CL:0000057!4.21e-10!75;CL:0000183!8.53e-10!59;CL:0000393!2.82e-09!60;CL:0000211!2.82e-09!60;CL:0000192!1.70e-08!42;CL:0000514!1.70e-08!42;CL:0000359!3.02e-08!32;CL:1000413!5.09e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.06e-22;24!CL:0000071;1.59e-16;18!CL:0000115;4.38e-14;36!CL:0000213;9.80e-13;58!CL:0000215;9.80e-13;58!CL:0002078;3.09e-12;45!CL:1000413;5.14e-09;9!CL:0002138;2.74e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.46e-29,121;CL:0000213,9.20e-23,58;CL:0000215,9.20e-23,58;CL:0002139,2.62e-22,24;CL:0002078,2.23e-17,45;CL:0000071,1.30e-16,18;CL:0002546,1.30e-16,18;CL:0000115,1.45e-16,36;CL:0002321,8.20e-13,250;CL:0000057,1.15e-11,76;CL:0000076,2.32e-11,63;CL:0000187,1.35e-09,55;CL:0000680,4.14e-09,58;CL:0000056,4.14e-09,58;CL:0000355,4.14e-09,58;CL:1000413,5.85e-09,9;CL:0000393,1.18e-07,61;CL:0000211,1.18e-07,61;CL:0000192,1.29e-07,43;CL:0000514,1.29e-07,43;CL:0005020,2.89e-07,6;CL:0002138,2.89e-07,6;CL:0005022,2.89e-07,6;CL:0000359,3.29e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002546;1.59e-16;18!CL:0000222;2.35e-08;121!CL:0005022;2.74e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.06e-26!84;UBERON:0002049!1.55e-25!79;UBERON:0007798!1.55e-25!79;UBERON:0000055!1.55e-22!69;UBERON:0001009!2.87e-21!113;UBERON:0004535!5.37e-21!110;UBERON:0001981!5.96e-21!60;UBERON:0007500!5.96e-21!60;UBERON:0004537!5.96e-21!60;UBERON:0006965!5.96e-21!60;UBERON:0003914!6.91e-19!118;UBERON:0000477!1.96e-17!286;UBERON:0000490!2.94e-16!138;UBERON:0001637!5.19e-15!42;UBERON:0003509!5.19e-15!42;UBERON:0004572!5.19e-15!42;UBERON:0000483!8.74e-15!309;UBERON:0000119!4.49e-14!312;UBERON:0006914!2.76e-13!25;UBERON:0004111!7.36e-13!241;UBERON:0001986!1.12e-12!18;UBERON:0004638!1.12e-12!18;UBERON:0004852!1.12e-12!18;UBERON:0004573!1.76e-12!33;UBERON:0004571!1.76e-12!33;UBERON:0000487!8.15e-12!22;UBERON:0000468!2.99e-11!659;UBERON:0002385!2.90e-10!63;UBERON:0001015!2.90e-10!63;UBERON:0000383!2.90e-10!63;UBERON:0001134!3.68e-10!61;UBERON:0002036!3.68e-10!61;UBERON:0003082!3.68e-10!61;UBERON:0000025!7.49e-10!194;UBERON:0000947!9.35e-10!21;UBERON:0010191!9.35e-10!21;UBERON:0000467!2.13e-09!625;UBERON:0000486!2.16e-09!82;UBERON:0000480!3.09e-09!626;UBERON:0000475!1.82e-08!365;UBERON:0007100!2.19e-08!27;UBERON:0000948!2.65e-08!24;UBERON:0005498!2.65e-08!24;UBERON:0004140!2.65e-08!24;UBERON:0009881!2.65e-08!24;UBERON:0004141!2.65e-08!24;UBERON:0003084!2.65e-08!24;UBERON:0007005!2.65e-08!24;UBERON:0004139!2.65e-08!24;UBERON:0004291!2.65e-08!24;UBERON:0004290!9.44e-08!70;UBERON:0000914!4.61e-07!83;UBERON:0002329!4.61e-07!83;UBERON:0003077!4.61e-07!83;UBERON:0003059!4.61e-07!83;UBERON:0007282!4.61e-07!83;UBERON:0009618!4.61e-07!83;UBERON:0007285!4.61e-07!83;UBERON:0003915!5.09e-07!9;UBERON:0004700!5.09e-07!9;UBERON:0001917!5.09e-07!9;UBERON:0002100!7.11e-07!216;UBERON:0005256!7.79e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.59e-16;18!UBERON:0001986;1.59e-16;18!UBERON:0004852;1.59e-16;18!UBERON:0006914;6.43e-16;25!UBERON:0000487;6.04e-15;22!UBERON:0001637;1.04e-13;42!UBERON:0003509;1.04e-13;42!UBERON:0004572;1.04e-13;42!UBERON:0000055;8.74e-13;65!UBERON:0007500;9.50e-13;56!UBERON:0001981;9.50e-13;56!UBERON:0004537;9.50e-13;56!UBERON:0004573;1.07e-12;33!UBERON:0004571;1.07e-12;33!UBERON:0002049;1.67e-12;75!UBERON:0007798;1.67e-12;75!UBERON:0000947;1.96e-10;21!UBERON:0010191;1.96e-10;21!UBERON:0000490;9.20e-10;33!UBERON:0003915;5.14e-09;9!UBERON:0004700;5.14e-09;9!UBERON:0001917;5.14e-09;9!UBERON:0001009;4.51e-08;112!UBERON:0003914;5.47e-08;74!UBERON:0004535;1.07e-07;109!UBERON:0001638;2.62e-07;9!UBERON:0003920;2.62e-07;9!UBERON:0004582;2.62e-07;9!UBERON:0004457;3.56e-07;9!UBERON:0000042;3.56e-07;9!UBERON:0000948;8.80e-07;22 | |||
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|phase1_expression=13.4442000660212,4.06790995392868,8.59821864985424,11.0080628188443,11.1740273606822,34.8935409640147,0,0.631719873426831,4.96252693579693,0.245733936501509,0,1.09220686065086,0,1.23766352960047,3.64537113300707,4.70627602516243,4.21886169616784,3.65155045193687,4.39139518911456,0.123121058076788,0.816002764977012,0.313454721478088,0,0.136874425072884,1.25542639594803,0,0,0,0,0,0.154816123316076,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,7.37770945674,21.6087729515566,63.2518516672991,6.01605492763067,52.2895933448574,0,7.29952305453954,1.60709189178915,1.33037638477538,1.84453049955565,0.196468613246569,0.728590576585084,1.85392221392215,0,0,0.132957960518865,0,0,0,3.18019851786728,7.74211135595512,15.2741820707341,6.21838736116411,18.8774746294458,10.7296036356626,3.34391946458897,15.2465887909904,11.3845204059747,9.0374565446461,16.1131726843659,9.12326526862215,22.2096472368834,20.2214694190228,21.0636906449257,13.7521581557483,14.3698798480749,12.0494284117155,9.19899824795299,1.89853131913626,9.52649068438118,0,0,1.3082821564276,8.44852317882041,9.49728837484348,8.474187572046,36.1414142143505,4.61068896857864,9.53151920241922,0,5.92002116201184,8.40269795579369,6.33140158727534,8.50001896189985,2.11900398702904,5.18558332031999,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0,0,0,0.245668634623536,0.206651562351531,1.18800285728205,0.494533858557114,0,0,0,0,0,0.877955241761676,2.14541457059314,2.25357088359895,13.2715654297225,7.71375433462106,13.0270007179326,9.32500365102072,5.40163972951924,2.57631323096097,1.54584324027377,0.930584281657949,2.19409231913646,1.16924406193438,5.80597680761463,8.28449087780694,7.75901072730297,9.58525899794859,1.5112814734146,0.847802961552438,0.193260853163297,0.272746120590835,0.860413786167011,0,0,0,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0.928735856063958,1.44375896333917,0.591534000199219,1.18009283054671,1.44606617930089,0.992645754591546,0.435758888184812,0,0.943819157121151,0.784885860501384,0.769494313892781,0,0,2.057870056657,0,0,0,0,0,0,1.88724591328378,0.439001141634502,0,0.201057944823262,0.462942225792648,0,0,4.3299402607582,0.34779121492523,4.93116515790451,14.1479118805852,18.982406015641,22.8304982681518,0,0,0,0,0,0,0.335964256397719,0,2.32852159027406,1.16253575405585,1.53353071666084,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,1.29271715757778,0,0,0,0,0,0,0,7.14889968290738,1.08524321078289,0.823240336780769,0,6.39705507736582,2.37585561880029,0.602878754119172,0,1.19967589418468,0,0,0,0.718874566474748,2.29723871668228,0,1.15825045334063,0.410952645100767,0.179060963239896,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,3.31267027641678,4.50153468953709,1.89885516589815,8.52680532276309,1.42743191037729,8.67363282686641,6.32563640960651,1.20378439891088,2.27407504055985,0,2.65690239414175,0.184369168541703,1.91143951829782,0,0,0,0,0,0.909382714338778,3.32870879020994,1.5119514666484,8.68377327365719,13.8115775959256,7.57782254969299,6.91951405980785,5.11707249066703,5.46903331888265,20.7785293022987,0,0.887808626565635,0.0821271560138091,0,0.232420756919918,0,1.20303882181971,0.276242966807689,1.03333003348146,0,1.44236856455367,0,0.15403067420883,0,0,0.105551628892876,2.27466768141793,2.04112446331819,13.6027027144348,4.62681758070868,0,0.501689773854853,0,0,0,0,0,0,1.31205858279882,1.62689197332152,1.33953315142039,0,0,0.574265537996172,0,3.21367859688319,0.386682873168488,1.69453478826109,1.38153307253517,0.413509717453592,2.36324538710202,2.32026710262766,0.511359764496605,1.24644849905432,1.81813406897076,3.65161127993702,2.4246415373971,0.809262246844399,0.464845549297286,5.98143458978216,0,5.5446044431696,0.532306030317022,0.869932992075073,1.48259375283136,1.28812398067792,0.372158369359667,1.58189712359363,17.9192382288395,0.255897791311334,2.56763392820352,2.22742273548156,0.78494864019923,3.77732160924961,3.29444435683266,2.35624804691373,0.808729926293264,1.58510321173008,4.21258456238981,0,6.09283724078211,5.28250733783777,0.136499911407986,1.27264888758341,2.26016233240486,0,7.29782872765342,6.13831239355268,0,1.9676842561399,0.405820753925408,3.40805847909725,1.97186921772569,1.29070216983646,4.51945588660357,0,0.354761064070598,63.3322905892992,68.4933377356596,0.75894634753143,0,0.577332676353072,0.670302275535787,0,0.470719003883896,0,3.36942951335251,1.7737206141467,1.83778720165568,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,1.43246690842614,1.48482340416319,2.15012491469462,0,0,2.78271762557265,0,0,5.57894367102995,0,0,4.60209071259697,0,2.17727711363265,0.449341755736634,0,0,0.789147245095469,0,2.22273980289274,0,0.278304294485554,0,0,0,0.724999575434793,0.68276068971299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| ||
|short_description=p@chr2:56145014..56145064,+ | |||
}} | }} |
Latest revision as of 11:01, 29 July 2015
Short description: | p@chr2:56145014..56145064, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56145014..56145064, + |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.46e-29 | 121 |
lining cell | 9.20e-23 | 58 |
barrier cell | 9.20e-23 | 58 |
endothelial cell of vascular tree | 2.62e-22 | 24 |
meso-epithelial cell | 2.23e-17 | 45 |
blood vessel endothelial cell | 1.30e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.30e-16 | 18 |
endothelial cell | 1.45e-16 | 36 |
embryonic cell | 8.20e-13 | 250 |
fibroblast | 1.15e-11 | 76 |
squamous epithelial cell | 2.32e-11 | 63 |
muscle cell | 1.35e-09 | 55 |
muscle precursor cell | 4.14e-09 | 58 |
myoblast | 4.14e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.14e-09 | 58 |
endothelial cell of artery | 5.85e-09 | 9 |
electrically responsive cell | 1.18e-07 | 61 |
electrically active cell | 1.18e-07 | 61 |
smooth muscle cell | 1.29e-07 | 43 |
smooth muscle myoblast | 1.29e-07 | 43 |
lymphangioblast | 2.89e-07 | 6 |
endothelial cell of lymphatic vessel | 2.89e-07 | 6 |
vascular lymphangioblast | 2.89e-07 | 6 |
vascular associated smooth muscle cell | 3.29e-07 | 32 |