FFCP PHASE1:Hg19::chr4:149363662..149363688,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:149363662..149363688,- to FFCP PHASE1:Hg19::chr4:149363662..149363688,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4306 | |EntrezGene=4306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7979 | |HGNC=7979 | ||
|TSSclassifier=strong | |||
|UniProt=B0ZBF7,P08235,F5GZH0,B0ZBF6,B0ZBF5,Q2NKL1 | |UniProt=B0ZBF7,P08235,F5GZH0,B0ZBF6,B0ZBF5,Q2NKL1 | ||
|association_with_transcript=0bp_to_ENST00000355292,ENST00000358102,ENST00000544252,NM_000901,NM_001166104_5end | |||
|cluster_id=chr4:149363662..149363688,- | |||
|coexpression_cluster_id=C652 | |||
|description=CAGE_peak_6_at_NR3C2_5end | |||
|id=chr4:149363662..149363688,- | |||
|ontology_enrichment_celltype=CL:0000791!5.64e-09!18;CL:0000789!5.64e-09!18;CL:0002420!5.64e-09!18;CL:0002419!5.64e-09!18;CL:0000790!5.64e-09!18;CL:0000838!4.76e-08!52;CL:0000084!8.06e-08!25;CL:0000827!8.06e-08!25;CL:0000542!1.10e-07!53;CL:0000051!1.10e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.41e-09;18!CL:0000789;2.41e-09;18!CL:0002419;2.41e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.12e-09,18;CL:0000789,1.12e-09,18;CL:0002420,1.12e-09,18;CL:0002419,1.12e-09,18;CL:0000790,1.12e-09,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.37e-16;82!CL:0000790;2.41e-09;18!UBERON:0006215;1.76e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.09e-54!115;UBERON:0001049!4.19e-29!57;UBERON:0005068!4.19e-29!57;UBERON:0006241!4.19e-29!57;UBERON:0007135!4.19e-29!57;UBERON:0003080!1.52e-23!42;UBERON:0002616!4.12e-23!59;UBERON:0002780!6.72e-23!41;UBERON:0001890!6.72e-23!41;UBERON:0006240!6.72e-23!41;UBERON:0002346!1.02e-20!90;UBERON:0000955!1.61e-20!69;UBERON:0006238!1.61e-20!69;UBERON:0003075!3.95e-20!86;UBERON:0007284!3.95e-20!86;UBERON:0001017!1.19e-18!82;UBERON:0005743!1.70e-18!86;UBERON:0001893!4.85e-18!34;UBERON:0002020!8.27e-18!34;UBERON:0003528!8.27e-18!34;UBERON:0002791!3.07e-17!33;UBERON:0001869!1.05e-16!32;UBERON:0000073!1.05e-16!94;UBERON:0001016!1.05e-16!94;UBERON:0003056!6.00e-15!61;UBERON:0002619!1.69e-13!22;UBERON:0001950!4.53e-12!20;UBERON:0000153!7.34e-12!129;UBERON:0007811!7.34e-12!129;UBERON:0000956!1.18e-11!25;UBERON:0000203!1.18e-11!25;UBERON:0000033!1.97e-10!123;UBERON:0002420!3.59e-08!9;UBERON:0007245!3.59e-08!9;UBERON:0010009!3.59e-08!9;UBERON:0010011!3.59e-08!9;UBERON:0000454!3.59e-08!9;UBERON:0002308!5.94e-08!9;UBERON:0000125!5.94e-08!9;UBERON:0000924!1.01e-07!173;UBERON:0006601!1.01e-07!173;UBERON:0004121!2.99e-07!169;UBERON:0003076!7.61e-07!15;UBERON:0003057!7.61e-07!15;UBERON:0002298!9.86e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.84e-36;34!UBERON:0000073;6.23e-35;53!UBERON:0002616;6.23e-35;53!UBERON:0002780;1.12e-34;41!UBERON:0001890;1.12e-34;41!UBERON:0003528;5.27e-34;34!UBERON:0002020;5.27e-34;34!UBERON:0001869;1.17e-33;32!UBERON:0002791;2.40e-33;32!UBERON:0002619;1.53e-31;22!UBERON:0001950;5.26e-28;20!UBERON:0000956;3.10e-27;25!UBERON:0000203;3.10e-27;25!UBERON:0000955;1.62e-23;68!UBERON:0001017;3.40e-22;75!UBERON:0001016;5.08e-17;83!UBERON:0007023;6.92e-17;114!UBERON:0002420;3.02e-15;9!UBERON:0000125;3.02e-15;9!UBERON:0007245;3.02e-15;9!UBERON:0002308;3.02e-15;9!UBERON:0010009;3.02e-15;9!UBERON:0010011;3.02e-15;9!UBERON:0000454;3.02e-15;9!UBERON:0004732;3.95e-15;13!UBERON:0000200;1.00e-13;6!UBERON:0004733;1.42e-13;12!UBERON:0002028;1.42e-13;12!UBERON:0002298;4.84e-12;6!UBERON:0009663;1.04e-11;7!UBERON:0000349;9.21e-11;5!UBERON:0000369;2.82e-10;4!UBERON:0002435;2.82e-10;4!UBERON:0000204;2.82e-10;4!UBERON:0003296;4.89e-10;4!UBERON:0010133;4.89e-10;4!UBERON:0002680;8.94e-09;9!UBERON:0001895;8.94e-09;9!UBERON:0001894;2.07e-08;7!UBERON:0005383;2.53e-08;3!UBERON:0005382;2.53e-08;3!UBERON:0002021;4.08e-08;5!UBERON:0001871;6.20e-08;6!UBERON:0001872;6.89e-08;5!UBERON:0001870;1.84e-07;3!UBERON:0011216;6.67e-07;132!UBERON:0000988;7.66e-07;3!UBERON:0001896;7.66e-07;3!UBERON:0005290;7.66e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.17e-63,56;UBERON:0005068,1.17e-63,56;UBERON:0006241,1.17e-63,56;UBERON:0007135,1.17e-63,56;UBERON:0000073,2.62e-61,53;UBERON:0002616,2.62e-61,53;UBERON:0007023,1.04e-59,114;UBERON:0000955,2.17e-52,68;UBERON:0006238,2.17e-52,68;UBERON:0001017,6.24e-49,81;UBERON:0002780,1.03e-48,41;UBERON:0001890,1.03e-48,41;UBERON:0003080,1.03e-48,41;UBERON:0006240,1.03e-48,41;UBERON:0003075,6.14e-46,82;UBERON:0007284,6.14e-46,82;UBERON:0002346,1.64e-45,86;UBERON:0001016,9.65e-45,89;UBERON:0001893,1.01e-41,34;UBERON:0003528,3.89e-41,34;UBERON:0002020,3.89e-41,34;UBERON:0001869,2.69e-38,32;UBERON:0002791,8.03e-38,32;UBERON:0003056,6.47e-34,61;UBERON:0010371,2.03e-33,104;UBERON:0002619,4.49e-32,22;UBERON:0001950,2.20e-28,20;UBERON:0000956,1.06e-27,25;UBERON:0000203,1.06e-27,25;UBERON:0010314,6.22e-25,132;UBERON:0004121,2.83e-20,171;UBERON:0000924,2.83e-20,171;UBERON:0006601,2.83e-20,171;UBERON:0011216,4.75e-17,223;UBERON:0002420,1.52e-15,9;UBERON:0007245,1.52e-15,9;UBERON:0010009,1.52e-15,9;UBERON:0010011,1.52e-15,9;UBERON:0000454,1.52e-15,9;UBERON:0003076,1.75e-15,15;UBERON:0003057,1.75e-15,15;UBERON:0000125,4.91e-15,9;UBERON:0002308,4.91e-15,9;UBERON:0004732,7.46e-15,13;UBERON:0000200,6.44e-14,6;UBERON:0004733,2.48e-13,12;UBERON:0002028,2.48e-13,12;UBERON:0007277,2.48e-13,12;UBERON:0000025,5.58e-13,192;UBERON:0009663,9.85e-12,7;UBERON:0002298,1.00e-11,6;UBERON:0000349,2.57e-11,5;UBERON:0000369,2.19e-10,4;UBERON:0002435,2.19e-10,4;UBERON:0000204,2.19e-10,4;UBERON:0010082,2.19e-10,4;UBERON:0003296,5.99e-10,4;UBERON:0010133,5.99e-10,4;UBERON:0004111,7.47e-10,240;UBERON:0002680,1.28e-08,9;UBERON:0001895,1.28e-08,9;UBERON:0010092,1.28e-08,9;UBERON:0005383,2.35e-08,3;UBERON:0005382,2.35e-08,3;UBERON:0001894,2.78e-08,7;UBERON:0006222,2.78e-08,7;UBERON:0001871,3.14e-08,6;UBERON:0002021,4.38e-08,5;UBERON:0001872,7.46e-08,5;UBERON:0001870,1.60e-07,3;UBERON:0001896,9.50e-07,3;UBERON:0005290,9.50e-07,3;UBERON:0010096,9.50e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,1.15148819429164,0.154816123316076,0,0,0,0.232401601740905,0.568676929949686,0.293600439334847,0.553995408531877,0.200544447470142,0.217010870715852,0.223915474239924,0,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0.425208599930087,0,0,0.150176892841506,0,0,0.19891667719909,0,3.51992488922645,0,0.889509253863555,0.426730222566507,1.60158394814405,0.574752439954483,0.661044872784862,0,1.1384259382189,0,1.52909291250092,0,0,0,1.37696839079683,2.75107533924415,1.43921049299656,0.167186495390678,0.977766799900771,0.946895611469467,1.94826728407911,0.111410456885174,0.589211814949674,0.664601683750863,0.541607727530031,0,0.130059347559878,0,0,0,3.70716407905151,2.94294910898684,5.22677619024884,0.113309342697566,1.91610246800961,2.40539211837841,2.02415753615602,1.59282707162048,2.60433381542567,0.950452044448374,0.451725357233318,0.76791966692651,0,0.473554504088034,1.64225599384209,1.81446068902259,1.87208137048455,1.88271725047639,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0,0.175669571386252,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,1.03366703667732,0.35576626268671,0.33472061276467,0,0.760272105718513,0.24406205754817,0.735326160691737,0,0.446498641420399,0.22452937262617,0.450445921933289,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0,0.286804595389004,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,1.26755034821831,0,0,0,0.368965315629341,0,0.219500570817251,0,0,0,0,0,0,0.34779121492523,0,0,0,0.190254152234598,0,0,0.984868024349589,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0,0.414656231081544,1.29707958075265,0.6312121671319,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,1.97030760201927,1.07813787429759,0.77005821767849,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,1.07857100409308,0.853820462427555,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0.105551628892876,0,0.510281115829547,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.721287081534056,0.0915694648183434,0.165018999841176,0,0,0,0.193341436584244,0,0.614014698904518,0,0.107420244868274,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0.238231775457789,0.822724546172388,0,0,0.79312517629427,0,0,0.245040215981032,0,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.879049075631364,0,0.66866030566487,0,0.71623345421307,0,0.307160702099232,1.9882952955326,2.95405774462077,0.445234820091624,0.329607748453519,0,0.597743964753209,0.828851746593443,0,0.102268682502155,0,0,0.0898683511473268,0.716084698702437,0,0.690503839458535,2.3948309234694,0,5.81599647657131,3.24688343566479,1.99613798001194,0,0.349839999984783,1.44999915086959,0.227586896570999,0.254253650292766,0.236387681767936,0,0.291604613383254,0.173624994933292,3.54296554325536,4.5826646677655,4.5774520895125,12.8271941520221,4.43321428430321,2.4132393686937,0.10893846351899,0.41827123283581,0.923403102045565,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0.158936578980379,0.421996129056054,0,0,0.216388639742091,0,0.707660516026713,0.611030144933625,0.296521128680622,0,0,2.3590396543237,0.802577647298789,0.702793337176017,0,0,0,0.789168805698781,0,0.91821828489147,0.505492637027904,0,0.311064574191741,0,0,0.627865836814451,0,0,0.138674673013139,0.520679215005393,0,0,0.17472666824203,0.171986032471617,0,0,0,1.06687918137261,0.0882561266915003,1.58186518546373,0,0,2.40581024632339,0,0.160317640503067,0.640358984218058,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,2.46429682005587,0,0,0.262887354279314,0.558564802544508,1.60412296808179,0.717873024576814,0.599037001496973,0.429226048136571,0.223171457441873,0.739018197353989,0,0,0,0.0824158583811665,0,0,0,1.59045937961861,2.99647493445466,0,0,0,0,0,2.79447960626913,0,0.630445658393585,0.891727998294968,0.105600336519406,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,1.0342636508924,2.24795422962573,0.171086837884329,0,0.640724475406168,0.943225830597996,0.414239055347196,0.992332043623902,0.197611631897944,0,0,0,0.5013797880454,0,0.655745261419609,0.157054096250234,1.77213635993397,2.9286303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| ||
|short_description=p6@NR3C2 | |||
}} | }} |
Latest revision as of 00:48, 16 September 2015
Short description: | p6@NR3C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NR3C2_5end |
Coexpression cluster: | C652_cerebellum_occipital_pineal_pituitary_medial_parietal_amygdala |
Association with transcript: | 0bp_to_ENST00000355292, ENST00000358102, ENST00000544252, NM_000901, NM_001166104_5end |
EntrezGene: | NR3C2 |
HGNC: | 7979 |
UniProt: | B0ZBF7P08235F5GZH0B0ZBF6B0ZBF5Q2NKL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.12e-09 | 18 |
alpha-beta T cell | 1.12e-09 | 18 |
immature T cell | 1.12e-09 | 18 |
mature T cell | 1.12e-09 | 18 |
immature alpha-beta T cell | 1.12e-09 | 18 |