FFCP PHASE1:Hg19::chr4:89080174..89080191,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:89080174..89080191,- to FFCP PHASE1:Hg19::chr4:89080174..89080191,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9429 | |EntrezGene=9429 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=74 | |HGNC=74 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UNQ0 | |UniProt=Q9UNQ0 | ||
|association_with_transcript=-110bp_to_ENST00000237612_5end | |||
|cluster_id=chr4:89080174..89080191,- | |||
|description=CAGE_peak_8_at_ABCG2_5end | |||
|id=chr4:89080174..89080191,- | |||
|ontology_enrichment_celltype=CL:0000039!6.68e-12!7;CL:0000586!6.68e-12!7;CL:0000066!7.66e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.14e-52;7!CL:0000586;5.14e-52;7!CL:0002541;1.02e-22;3!CL:0002563;3.22e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.59e-52,7;CL:0000586,5.59e-52,7;CL:0002541,1.10e-22,3;CL:0002563,4.31e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.82e-12;10!UBERON:0005564;4.82e-12;10!UBERON:0003124;4.52e-09;1!UBERON:0005754;1.27e-08;1 | |||
|ontology_enrichment_disease=DOID:305!4.17e-16!106;DOID:0050687!4.44e-12!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.67e-16;22!DOID:2994;4.67e-16;22!DOID:1799;3.44e-09;1!DOID:10165;3.44e-09;1!DOID:1798;3.44e-09;1!DOID:178;5.07e-09;1!DOID:326;5.07e-09;1!DOID:3978;5.07e-09;1!DOID:3394;5.07e-09;1!DOID:5844;5.07e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.79e-16,22;DOID:2994,4.79e-16,22;DOID:1799,3.31e-09,1;DOID:10165,3.31e-09,1;DOID:1798,3.31e-09,1;DOID:178,5.28e-09,1;DOID:326,5.28e-09,1;DOID:3978,5.28e-09,1;DOID:3394,5.28e-09,1;DOID:5844,5.28e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.96e-12!9;UBERON:0001007!1.11e-09!155;UBERON:0001555!1.11e-09!155;UBERON:0007026!1.11e-09!155;UBERON:0004119!1.93e-09!169;UBERON:0000925!1.93e-09!169;UBERON:0006595!1.93e-09!169;UBERON:0003101!1.78e-08!22;UBERON:0000079!1.78e-08!22;UBERON:0000062!3.40e-08!511;UBERON:0000077!9.83e-08!130;UBERON:0008947!1.21e-07!38;UBERON:0003258!1.21e-07!38;UBERON:0000064!3.29e-07!219;UBERON:0001004!4.11e-07!72;UBERON:0000473!5.28e-07!8;UBERON:0001557!7.87e-07!19;UBERON:0000065!9.37e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;9.10e-24;11!UBERON:0000473;7.17e-23;8!UBERON:0003124;1.02e-22;3!UBERON:0000920;1.02e-22;3!UBERON:0003101;1.14e-15;22!UBERON:0000079;1.14e-15;22!UBERON:0006947;6.28e-11;3!UBERON:0004054;6.28e-11;3!UBERON:0001000;5.07e-09;1!UBERON:0005352;5.07e-09;1!UBERON:0000998;1.27e-08;1!UBERON:0006868;1.27e-08;1!UBERON:0000991;1.27e-08;21!UBERON:0005904;2.07e-08;4!UBERON:0001052;2.27e-08;4!UBERON:0001242;3.22e-08;4!UBERON:0001262;3.22e-08;4!UBERON:0004786;3.22e-08;4!UBERON:0004808;3.22e-08;4!UBERON:0001277;3.22e-08;4!UBERON:0005631;3.49e-07;10!UBERON:0000158;3.49e-07;10!UBERON:0004907;7.36e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,7.93e-24,11;UBERON:0000473,6.27e-23,8;UBERON:0000920,1.10e-22,3;UBERON:0003124,2.97e-17,7;UBERON:0003101,1.12e-15,22;UBERON:0000079,1.12e-15,22;UBERON:0006947,5.15e-11,3;UBERON:0004054,5.15e-11,3;UBERON:0001000,4.89e-09,1;UBERON:0005352,4.89e-09,1;UBERON:0003133,8.28e-09,48;UBERON:0005156,8.84e-09,59;UBERON:0000990,8.84e-09,59;UBERON:0000998,9.74e-09,1;UBERON:0006868,9.74e-09,1;UBERON:0005631,1.04e-08,14;UBERON:0000158,1.04e-08,14;UBERON:0000991,1.21e-08,21;UBERON:0009196,1.21e-08,21;UBERON:0009117,1.21e-08,21;UBERON:0005564,1.21e-08,21;UBERON:0005904,1.78e-08,4;UBERON:0001052,2.88e-08,4;UBERON:0004176,3.05e-08,22;UBERON:0001242,4.31e-08,4;UBERON:0001262,4.31e-08,4;UBERON:0004786,4.31e-08,4;UBERON:0004808,4.31e-08,4;UBERON:0001277,4.31e-08,4;UBERON:0004907,8.92e-07,5 | |||
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| ||
|short_description=p8@ABCG2 | |||
}} | }} |
Latest revision as of 07:10, 19 September 2015
Short description: | p8@ABCG2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ABCG2_5end |
Coexpression cluster: | NA |
Association with transcript: | -110bp_to_ENST00000237612_5end |
EntrezGene: | ABCG2 |
HGNC: | 74 |
UniProt: | Q9UNQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.59e-52 | 7 |
germ cell | 5.59e-52 | 7 |
chorionic membrane mesenchymal stem cell | 1.10e-22 | 3 |
intestinal epithelial cell | 4.31e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 7.93e-24 | 11 |
testis | 6.27e-23 | 8 |
egg chorion | 1.10e-22 | 3 |
chorion | 2.97e-17 | 7 |
male organism | 1.12e-15 | 22 |
male reproductive system | 1.12e-15 | 22 |
male genital duct | 5.15e-11 | 3 |
internal male genitalia | 5.15e-11 | 3 |
vas deferens | 4.89e-09 | 1 |
spermatic cord | 4.89e-09 | 1 |
reproductive organ | 8.28e-09 | 48 |
reproductive structure | 8.84e-09 | 59 |
reproductive system | 8.84e-09 | 59 |
seminal vesicle | 9.74e-09 | 1 |
seminal fluid secreting gland | 9.74e-09 | 1 |
extraembryonic membrane | 1.04e-08 | 14 |
membranous layer | 1.04e-08 | 14 |
gonad | 1.21e-08 | 21 |
indifferent external genitalia | 1.21e-08 | 21 |
indifferent gonad | 1.21e-08 | 21 |
gonad primordium | 1.21e-08 | 21 |
duct of male reproductive system | 1.78e-08 | 4 |
rectum | 2.88e-08 | 4 |
external genitalia | 3.05e-08 | 22 |
intestinal mucosa | 4.31e-08 | 4 |
wall of intestine | 4.31e-08 | 4 |
gastrointestinal system mucosa | 4.31e-08 | 4 |
gastrointestinal system epithelium | 4.31e-08 | 4 |
intestinal epithelium | 4.31e-08 | 4 |
lower digestive tract | 8.92e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.79e-16 | 22 |
germ cell cancer | 4.79e-16 | 22 |
islet cell tumor | 3.31e-09 | 1 |
endocrine pancreas cancer | 3.31e-09 | 1 |
pancreatic endocrine carcinoma | 3.31e-09 | 1 |
vascular disease | 5.28e-09 | 1 |
ischemia | 5.28e-09 | 1 |
extrinsic cardiomyopathy | 5.28e-09 | 1 |
myocardial ischemia | 5.28e-09 | 1 |
myocardial infarction | 5.28e-09 | 1 |