FFCP PHASE1:Hg19::chr5:134369973..134369984,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:134369973..134369984,- to FFCP PHASE1:Hg19::chr5:134369973..134369984,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5307 | |EntrezGene=5307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9004 | |HGNC=9004 | ||
|TSSclassifier=strong | |||
|UniProt=P78337 | |UniProt=P78337 | ||
|association_with_transcript=3bp_to_ENST00000265340_5end | |||
|cluster_id=chr5:134369973..134369984,- | |||
|coexpression_cluster_id=C4464 | |||
|description=CAGE_peak_3_at_PITX1_5end | |||
|id=chr5:134369973..134369984,- | |||
|ontology_enrichment_celltype=CL:0000066!2.94e-18!254;CL:0000223!4.60e-17!59;CL:0002076!4.22e-16!43;CL:0002251!1.10e-10!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.75e-11;42!CL:0002251;6.89e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.15e-13,42;CL:0000223,4.89e-13,58;CL:0000066,1.01e-11,253;CL:0002251,6.48e-09,20 | |||
|ontology_enrichment_development_v019=CL:0000223;1.94e-08;58 | |||
|ontology_enrichment_disease=DOID:162!1.52e-31!235;DOID:305!5.17e-31!106;DOID:14566!2.69e-30!239;DOID:0050687!3.87e-27!143;DOID:0050686!4.15e-08!137;DOID:1749!6.74e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.07e-16,235;DOID:14566,3.46e-15,239;DOID:305,9.31e-12,106;DOID:0050687,1.59e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.48e-26!169;UBERON:0000925!7.48e-26!169;UBERON:0006595!7.48e-26!169;UBERON:0001007!8.33e-26!155;UBERON:0001555!8.33e-26!155;UBERON:0007026!8.33e-26!155;UBERON:0004921!1.21e-21!129;UBERON:0004185!1.21e-21!129;UBERON:0000077!1.08e-18!130;UBERON:0001004!1.85e-16!72;UBERON:0000161!1.17e-15!35;UBERON:0001041!4.15e-13!98;UBERON:0000072!7.37e-12!46;UBERON:0000065!2.93e-11!53;UBERON:0003104!3.36e-11!238;UBERON:0009142!3.36e-11!238;UBERON:0008947!1.05e-10!38;UBERON:0003258!1.05e-10!38;UBERON:0005911!2.88e-10!82;UBERON:0000166!1.45e-09!21;UBERON:0000344!1.30e-08!12;UBERON:0000165!1.36e-08!28;UBERON:0000930!1.36e-08!28;UBERON:0005153!1.63e-08!37;UBERON:0001737!6.05e-08!9;UBERON:0001046!6.17e-08!19;UBERON:0000162!1.44e-07!14;UBERON:0001353!1.44e-07!14;UBERON:0000163!1.44e-07!14;UBERON:0006866!1.44e-07!14;UBERON:0000164!1.44e-07!14;UBERON:0000931!1.44e-07!14;UBERON:0005178!1.84e-07!34;UBERON:0002224!1.84e-07!34;UBERON:0003929!3.01e-07!54;UBERON:0005181!5.05e-07!35;UBERON:0004122!9.15e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.00e-10;9!UBERON:0001557;2.00e-10;9!UBERON:0000344;2.99e-10;20!UBERON:0003350;4.22e-09;8!UBERON:0000161;7.77e-09;19!UBERON:0000166;7.77e-09;19!UBERON:0000072;1.07e-08;37!UBERON:0001004;1.87e-08;65!UBERON:0000165;3.41e-08;28!UBERON:0003929;4.32e-08;7!UBERON:0000065;2.08e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.44e-18,160;UBERON:0000925,5.44e-18,160;UBERON:0006595,5.44e-18,160;UBERON:0001007,7.33e-18,145;UBERON:0001555,7.33e-18,145;UBERON:0007026,7.33e-18,145;UBERON:0004921,4.32e-17,118;UBERON:0000161,3.60e-16,36;UBERON:0001004,3.74e-15,74;UBERON:0001041,1.45e-12,87;UBERON:0000072,3.06e-11,47;UBERON:0000065,4.89e-11,54;UBERON:0001737,8.92e-11,9;UBERON:0000344,2.73e-10,20;UBERON:0000166,5.05e-10,22;UBERON:0001557,9.71e-10,19;UBERON:0001046,2.44e-09,19;UBERON:0003350,7.80e-09,8;UBERON:0008947,8.08e-09,38;UBERON:0003258,8.08e-09,38;UBERON:0000165,6.01e-08,29;UBERON:0000930,6.01e-08,29;UBERON:0000162,1.30e-07,14;UBERON:0001353,1.30e-07,14;UBERON:0000163,1.30e-07,14;UBERON:0006866,1.30e-07,14;UBERON:0000164,1.30e-07,14;UBERON:0000931,1.30e-07,14;UBERON:0005911,1.48e-07,82;UBERON:0011216,2.34e-07,223;UBERON:0004122,5.72e-07,15;UBERON:0003929,8.36e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.50602959389125,4.06729411183466,1.08454080812422,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53007406669196,2.50668955317945,2.17269778441236,0.795285947051099,1.94653948121054,0,0,0,0,0.364295288292542,0.741568885568859,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0.103325781175765,2.37600571456411,0.741800787835671,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0,0.751190294532984,0,0,0.213557388818567,0,0,0,0,0,0,0.292311015483596,0,0,0.323292113637624,0,0,0,3.09217365061275,1.09098448236334,1.14721838155602,0,0,0,0,0,0,0,1.28648187638577,0,0,0,2.60274960087657,2.86593973132773,1.20505514941741,2.75734931830985,0.871517776369625,2.60997681022206,2.29213223872279,1.76599318612811,2.30848294167834,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,1.94435734832912,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0.234004265139238,0,1.87467667973554,1.00789276919316,1.13420077793909,0.268675568108545,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0,1.06375246633948,1.04007436911366,1.02882949704857,0,2.1313774321288,0.57191197463259,1.62786481617433,1.64648067356154,0.977208552881205,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,2.27407504055985,1.03473071292505,0.664225598535437,0,1.47702144595741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0,0,0.116210378459959,1.32945394550784,0.40101294060657,4.51196845785892,2.52591785962135,0,1.83574180943194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,1.19040304263846,1.07262349896764,0,1.30012049207304,0,0.676695028044854,0,0,0.137836572484531,0.537101224341368,1.0151168573996,0,0.801288320820636,0.661139661443912,1.72971060628596,0,1.8208400553999,0.464845549297286,0,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,1.02359116524534,0.855877976067841,0,0,0.539617372749944,0.823611089208164,0.942499218765491,0,0,0,2.92580243453754,0,0,1.63799893689583,3.81794666275024,0,0,0,0,0,0,0.811641507850816,0.92947049429925,0.845086807596724,1.00387946542836,0.785992328104969,0,0,1.26664581178598,0.658589785919804,0.379473173765715,0,2.11688647996127,4.02181365321472,1.08890984861323,0,0,0,2.21715076768338,0,0,0,0,0,0,0,0,0,0.961416640147258,0,1.47024129588619,1.11481905075431,0,0.0711418433484141,0.956557636372934,0,0,0,0,0,0,5.17043656050977,0,0,0,0,0,0,0,0,0,0,0,3.69262196843137,1.35227839237992,2.33150377598474,0,1.30998378285754,0.293016358543788,0,0,0.852408440419239,0,0,0,0,0,0.556543525114529,0,7.17826387635178,0,0,0,0.920418142519393,0,0,1.25815691606258,1.25314822272926,4.09257896181497,1.1837208676432,0,0,0,0,0,0.260427761085233,0.61221999997337,0,1.2517279311405,2.54253650292766,0,1.03423011972439,0,0.694499979733169,0,0,0,0,0,0,0.871507708151921,4.74040730547251,0.692552326534174,0.113942055847001,0,0.269272933229316,0,0,0.457987967009312,0,0,0,2.49317522850235,1.35357396370308,1.9606253431774,1.1747511088309,2.27704479269022,0,0,0,2.26164914294305,3.02944095638928,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,2.37191225980366,0.391329237864179,0.242780379534093,0,1.20990716048664,0,0,0.450970258243478,0.72581733978073,0,0,0,0,0,1.38674673013139,0,2.84177952501695,0.435296032902013,0,0.687944129886466,2.03188295707079,2.41194746384412,3.530964653288,4.75246180793255,0,0,0.959293472527256,0.19871461170299,0,1.36885967914362,0.480952921509202,0.640358984218058,0.39961921916426,0.576361668616424,0.916292769327325,0.171594997861965,2.16082196982225,0.745515213392595,8.24929121158784,1.9026588850306,1.15063130943567,1.83596791745379,0.866851769704557,0,0,0,1.28929632425987,0,0,0,0,0.399358000997982,0,0,0,0,1.16495949527454,1.3393140992228,1.64831716762333,1.48287796479207,0.78741985211799,0,0,0,0,0,0,0,0,0,4.02521625119119,0,0,1.26720403823288,2.33073541132698,0.575745591958336,0,0,0,0,0,0,0,3.61207091297091,0,0.906496732161005,0,0,0,0,0.513260513652988,1.40963004463334,0,0,0,0,0.592834895693833,0.487170393523584,0.638341257770182,0,0,0,0,0.471162288750703,0,0,0,0,0.110929051536852,0,0.276697269872462,1.49976489554528,0,0,1.17632909849086,0.936669811613763,0.869526171664951,0,0,0,0.378806010550178,0.50313580350515,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,1.03018711554838,0,0,0.57785949122191,1.07220795687463,1.04397716786085,0.906823702049089,0.231522474323834,0.244736704506468,0.71635536432595,1.54400723580486,1.09642024789354,2.47364804324233,0.771656153083659,1.68942440653073,0,1.38172136692479,0.303859956177382,0,0,0,0,0,0.49154581750743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| 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| ||
|short_description=p3@PITX1 | |||
}} | }} |
Latest revision as of 17:45, 24 September 2015
Short description: | p3@PITX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PITX1_5end |
Coexpression cluster: | C4464_anaplastic_Prostate_esophagus_Smooth_glassy_cervical_biphenotypic |
Association with transcript: | 3bp_to_ENST00000265340_5end |
EntrezGene: | PITX1 |
HGNC: | 9004 |
UniProt: | P78337 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.15e-13 | 42 |
endodermal cell | 4.89e-13 | 58 |
epithelial cell | 1.01e-11 | 253 |
epithelial cell of alimentary canal | 6.48e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.44e-18 | 160 |
endoderm | 5.44e-18 | 160 |
presumptive endoderm | 5.44e-18 | 160 |
digestive system | 7.33e-18 | 145 |
digestive tract | 7.33e-18 | 145 |
primitive gut | 7.33e-18 | 145 |
subdivision of digestive tract | 4.32e-17 | 118 |
orifice | 3.60e-16 | 36 |
respiratory system | 3.74e-15 | 74 |
foregut | 1.45e-12 | 87 |
segment of respiratory tract | 3.06e-11 | 47 |
respiratory tract | 4.89e-11 | 54 |
larynx | 8.92e-11 | 9 |
mucosa | 2.73e-10 | 20 |
oral opening | 5.05e-10 | 22 |
upper respiratory tract | 9.71e-10 | 19 |
hindgut | 2.44e-09 | 19 |
epithelium of mucosa | 7.80e-09 | 8 |
respiratory primordium | 8.08e-09 | 38 |
endoderm of foregut | 8.08e-09 | 38 |
mouth | 6.01e-08 | 29 |
stomodeum | 6.01e-08 | 29 |
cloaca | 1.30e-07 | 14 |
anal region | 1.30e-07 | 14 |
embryonic cloaca | 1.30e-07 | 14 |
terminal part of digestive tract | 1.30e-07 | 14 |
primitive urogenital sinus | 1.30e-07 | 14 |
proctodeum | 1.30e-07 | 14 |
endo-epithelium | 1.48e-07 | 82 |
organ system subdivision | 2.34e-07 | 223 |
genitourinary system | 5.72e-07 | 15 |
gut epithelium | 8.36e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.07e-16 | 235 |
disease of cellular proliferation | 3.46e-15 | 239 |
carcinoma | 9.31e-12 | 106 |
cell type cancer | 1.59e-09 | 143 |