FFCP PHASE1:Hg19::chr7:158380468..158380523,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:158380468..158380523,- to FFCP PHASE1:Hg19::chr7:158380468..158380523,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5799 | |EntrezGene=5799 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9677 | |HGNC=9677 | ||
|TSSclassifier=strong | |||
|UniProt=E7EM83,Q92932,E9PC57,Q9Y4I6 | |UniProt=E7EM83,Q92932,E9PC57,Q9Y4I6 | ||
|association_with_transcript=0bp_to_ENST00000409483,NM_002847,NM_130842,NM_130843,uc003wno.2,uc003wnp.2,uc003wnq.2,uc003wnr.2_5end | |||
|cluster_id=chr7:158380468..158380523,- | |||
|coexpression_cluster_id=C1635 | |||
|description=CAGE_peak_2_at_PTPRN2_5end | |||
|id=chr7:158380468..158380523,- | |||
|ontology_enrichment_celltype=CL:0000047!3.94e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.60e-17;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.88e-44!82;UBERON:0005743!9.03e-43!86;UBERON:0001049!1.06e-42!57;UBERON:0005068!1.06e-42!57;UBERON:0006241!1.06e-42!57;UBERON:0007135!1.06e-42!57;UBERON:0000073!2.48e-42!94;UBERON:0001016!2.48e-42!94;UBERON:0007023!1.41e-38!115;UBERON:0002780!1.55e-36!41;UBERON:0001890!1.55e-36!41;UBERON:0006240!1.55e-36!41;UBERON:0003080!2.74e-35!42;UBERON:0002616!4.96e-35!59;UBERON:0000955!2.77e-34!69;UBERON:0006238!2.77e-34!69;UBERON:0001893!3.74e-32!34;UBERON:0002020!4.28e-32!34;UBERON:0003528!4.28e-32!34;UBERON:0002791!4.80e-31!33;UBERON:0001869!1.16e-30!32;UBERON:0003075!2.34e-30!86;UBERON:0007284!2.34e-30!86;UBERON:0002346!5.53e-29!90;UBERON:0002619!1.31e-25!22;UBERON:0004121!1.66e-24!169;UBERON:0000924!6.16e-24!173;UBERON:0006601!6.16e-24!173;UBERON:0001950!1.26e-23!20;UBERON:0000956!2.76e-23!25;UBERON:0000203!2.76e-23!25;UBERON:0003056!3.69e-23!61;UBERON:0000033!1.06e-20!123;UBERON:0000153!2.93e-20!129;UBERON:0007811!2.93e-20!129;UBERON:0000481!3.54e-11!347;UBERON:0000922!3.59e-11!612;UBERON:0000025!6.55e-11!194;UBERON:0002420!1.88e-10!9;UBERON:0007245!1.88e-10!9;UBERON:0010009!1.88e-10!9;UBERON:0010011!1.88e-10!9;UBERON:0000454!1.88e-10!9;UBERON:0004111!2.85e-10!241;UBERON:0002308!3.25e-10!9;UBERON:0000125!3.25e-10!9;UBERON:0000064!6.30e-10!219;UBERON:0001871!8.09e-10!7;UBERON:0000468!4.62e-09!659;UBERON:0002050!6.91e-09!605;UBERON:0005423!6.91e-09!605;UBERON:0003076!1.02e-08!15;UBERON:0003057!1.02e-08!15;UBERON:0000923!1.39e-08!604;UBERON:0005291!1.39e-08!604;UBERON:0006598!1.39e-08!604;UBERON:0002532!1.39e-08!604;UBERON:0000062!1.72e-08!511;UBERON:0009663!2.11e-08!7;UBERON:0000475!3.20e-08!365;UBERON:0005409!3.52e-08!35;UBERON:0000477!9.05e-08!286;UBERON:0000200!9.42e-08!6;UBERON:0004732!3.89e-07!13;UBERON:0002021!5.18e-07!5;UBERON:0004921!5.86e-07!129;UBERON:0004185!5.86e-07!129;UBERON:0000160!8.00e-07!27;UBERON:0001872!8.03e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.05e-42;32!UBERON:0003528;1.64e-41;34!UBERON:0002020;1.64e-41;34!UBERON:0001893;1.69e-41;34!UBERON:0002791;2.18e-41;32!UBERON:0002780;9.18e-41;41!UBERON:0001890;9.18e-41;41!UBERON:0002619;2.16e-40;22!UBERON:0001950;3.45e-37;20!UBERON:0000073;2.21e-36;53!UBERON:0002616;2.21e-36;53!UBERON:0000956;8.44e-35;25!UBERON:0000203;8.44e-35;25!UBERON:0000955;1.96e-25;68!UBERON:0001017;6.41e-25;75!UBERON:0001016;4.04e-24;83!UBERON:0002420;6.85e-16;9!UBERON:0007245;6.85e-16;9!UBERON:0010009;6.85e-16;9!UBERON:0010011;6.85e-16;9!UBERON:0000454;6.85e-16;9!UBERON:0000125;1.65e-15;9!UBERON:0002308;1.65e-15;9!UBERON:0007023;1.34e-14;114!UBERON:0011216;2.18e-13;132!UBERON:0001871;2.81e-13;6!UBERON:0009663;1.36e-12;7!UBERON:0000200;1.52e-11;6!UBERON:0004732;2.50e-11;13!UBERON:0002021;2.45e-10;5!UBERON:0004733;3.58e-10;12!UBERON:0002028;3.58e-10;12!UBERON:0001872;4.71e-10;5!UBERON:0002298;5.36e-10;6!UBERON:0000349;7.17e-10;5!UBERON:0005409;1.81e-09;22!UBERON:0001894;8.85e-09;7!UBERON:0000369;9.81e-09;4!UBERON:0002435;9.81e-09;4!UBERON:0000204;9.81e-09;4!UBERON:0000160;1.98e-07;17!UBERON:0005383;5.83e-07;3!UBERON:0005382;5.83e-07;3!UBERON:0004921;7.70e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.54e-69,56;UBERON:0005068,1.54e-69,56;UBERON:0006241,1.54e-69,56;UBERON:0007135,1.54e-69,56;UBERON:0001016,9.59e-68,89;UBERON:0001017,2.83e-67,81;UBERON:0000073,2.82e-65,53;UBERON:0002616,2.82e-65,53;UBERON:0000955,1.02e-56,68;UBERON:0006238,1.02e-56,68;UBERON:0002780,1.36e-56,41;UBERON:0001890,1.36e-56,41;UBERON:0003080,1.36e-56,41;UBERON:0006240,1.36e-56,41;UBERON:0001893,4.28e-49,34;UBERON:0003528,5.31e-49,34;UBERON:0002020,5.31e-49,34;UBERON:0007023,2.57e-48,114;UBERON:0003075,3.42e-48,82;UBERON:0007284,3.42e-48,82;UBERON:0001869,1.13e-46,32;UBERON:0011216,2.14e-46,223;UBERON:0002791,5.83e-46,32;UBERON:0002346,3.48e-45,86;UBERON:0002619,2.23e-40,22;UBERON:0003056,6.14e-40,61;UBERON:0010371,1.48e-37,104;UBERON:0001950,3.62e-37,20;UBERON:0000956,8.66e-35,25;UBERON:0000203,8.66e-35,25;UBERON:0004121,5.37e-33,171;UBERON:0000924,5.37e-33,171;UBERON:0006601,5.37e-33,171;UBERON:0010314,3.19e-26,132;UBERON:0000025,2.76e-16,192;UBERON:0002420,7.04e-16,9;UBERON:0007245,7.04e-16,9;UBERON:0010009,7.04e-16,9;UBERON:0010011,7.04e-16,9;UBERON:0000454,7.04e-16,9;UBERON:0000125,1.69e-15,9;UBERON:0002308,1.69e-15,9;UBERON:0003076,6.40e-14,15;UBERON:0003057,6.40e-14,15;UBERON:0004111,1.78e-13,240;UBERON:0001871,2.94e-13,6;UBERON:0009663,1.39e-12,7;UBERON:0000200,1.54e-11,6;UBERON:0004732,2.40e-11,13;UBERON:0002021,2.38e-10,5;UBERON:0004733,3.46e-10,12;UBERON:0002028,3.46e-10,12;UBERON:0007277,3.46e-10,12;UBERON:0001872,4.80e-10,5;UBERON:0002298,5.10e-10,6;UBERON:0000349,7.04e-10,5;UBERON:0000923,9.24e-10,560;UBERON:0010316,9.24e-10,560;UBERON:0005291,9.24e-10,560;UBERON:0006598,9.24e-10,560;UBERON:0010317,9.24e-10,560;UBERON:0002532,9.24e-10,560;UBERON:0002050,1.65e-09,564;UBERON:0000483,4.48e-09,306;UBERON:0000119,7.92e-09,309;UBERON:0001894,8.30e-09,7;UBERON:0006222,8.30e-09,7;UBERON:0000922,8.95e-09,592;UBERON:0000369,9.73e-09,4;UBERON:0002435,9.73e-09,4;UBERON:0000204,9.73e-09,4;UBERON:0010082,9.73e-09,4;UBERON:0005423,1.76e-08,581;UBERON:0005409,5.32e-08,25;UBERON:0000160,2.03e-07,17;UBERON:0005383,5.78e-07,3;UBERON:0005382,5.78e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0.572471974262113,0,0,0,0,0,0,0,0.309632246632152,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,8.12070268085818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.989067717114227,0,0,0,0,0,0,0,0.600952235626387,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09776335516636,0.662648841607426,0.348581828608555,0.621966330092223,0.756962552626885,6.20461510428911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,2.36315962672562,0,5.16551441881077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,22.1237751557957,6.18631050222156,13.9038500227509,11.4828975297569,0,0,0,0.49076596687656,0,0.271265023699736,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,4.10922128611516,0,1.74953878978203,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.457847324091717,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0.255225424989168,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0,0,0.211107635297664,0,0,0.349934720244983,0,0.670302275535787,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0,0,0.890894042497916,0,46.724939445016,44.3108661693115,0,0,0.422250816255987,0.996239941255349,2.21027132424918,45.8517601094782,0,0,0,0,1.25314822272926,0,0.0986434056369336,0,0,99.8412728478075,37.4783116573879,97.8107610205851,0,0,0,0.227586896570999,0,0,9.30807107751954,0,5.72962483279864,48.7157762197611,65.1220768577203,12.2065389053667,12.9377734119533,17.4373095182593,32.249653381634,0,0,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,18.9099766904916,3.71521770914025,15.2757536233406,0,0,0,7.14452009595177,0,48.2584758194199,0,0,0.242780379534093,0,43.556657777519,61.214552326098,1.20054501294127,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0.0882561266915003,7.45736444575757,0,0,50.5853259687471,0.195551382734803,0,3.84215390530835,0.39961921916426,4.03453168031497,0,66.7504541683042,0,0,0,0,0,0,0,30.0210144354895,9.8571872802235,0,0,0,0.279282401272254,0,0,0,0,0,0.134366944973453,0,1.16495949527454,8.82371641840905,9.31299199707181,8.22323235021056,0,0,34.9901063516093,36.911123056237,0.964518890790115,1.10031549277787,0.415440338029185,0,0,58.0765761650716,0,0,0.209818352539992,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,14.7382570252168,20.0993554648889,0,0,0.427149650270779,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0,46.0755453582833,36.2418006758831,38.308424796189,4.58727356552057,8.65246601987448,12.3571841853353,0.276697269872462,0,0,0.570930667089935,0,1.40500471742064,5.21715702998971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,1.26184898228651,0,0,0.260994291965212,0,0,0.244736704506468,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0.303859956177382,34.1498337294775,0,0,0,0,0,11.4108546613659,0,0,0,0,0,0,1.24415452006595,5.49945796605702,5.82253981542082,0,19.0024770454104,0,0,0,0,0,0,19.2136979588513,0.705351887381368,0.3062454773532,61.7242853176976,41.0920071344196,37.992858455602,90.0460839016914,94.0227426907009,61.9648982079392,49.5730232089783,4.28308260777463,0,0,0,0,0,0,0.596748666348824,0,0,24.2269343482259,0,0,0.147856086217045,58.4200106949114,24.2134210570293,40.7172989107333,54.5375967667599,66.7309267002228,0,3.47347824872506,0.175871244359621,0.255524855279191,0,1.3451348888753,29.1343490033583,47.3537358010699,0.266107110487916,0,0,22.0221934844935,57.4196313203672,0,0.111231401892069,4.31712010677827,80.600297626909,0.280272163313789,33.7868726588513,0,0,3.28792103212619,1.42212250559454,0,0,0,0,0,0,2.15113679410139,0,0,0.423387050190929,0,0,0,0,8.34276985729565,0.487671699929078,0,0,0,0.485710993059139,50.0630451808906,15.9160620129095,0.118920090777569,0,0,64.6120970465363,2.31522474323834,4.15263164957519,117.579324090381,0.245148321753905,83.193821126874,8.63757255305759,2.97046400327086,18.5968520136696,0,0,0.0644578879735772,0,0,0,0,44.5505196830375,0.917458566809082,1.14671666521161,0.157771562193185,64.0479837598416,85.524735306714,12.6966441723696,0,0.462175628631418,0,0,0.109265571963696,0,0.815910637935854,0.26721740526556,0.551369397209069,1.25353769646188,1.13668047327359,1.07185652062471,13.26671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| ||
|short_description=p2@PTPRN2 | |||
}} | }} |
Latest revision as of 12:03, 17 September 2015
Short description: | p2@PTPRN2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTPRN2_5end |
Coexpression cluster: | C1635_brain_smallcell_occipital_somatostatinoma_temporal_duodenum_small |
Association with transcript: | 0bp_to_ENST00000409483, NM_002847, NM_130842, NM_130843, uc003wno.2, uc003wnp.2, uc003wnq.2, uc003wnr.2_5end |
EntrezGene: | PTPRN2 |
HGNC: | 9677 |
UniProt: | E7EM83Q92932E9PC57Q9Y4I6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data