FFCP PHASE1:Hg19::chr8:93029879..93029904,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=862 | |EntrezGene=862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1535 | |HGNC=1535 | ||
|TSSclassifier=strong | |||
|UniProt=Q06455,Q7Z4J5 | |UniProt=Q06455,Q7Z4J5 | ||
|association_with_transcript=3bp_to_NM_175636,uc003yfb.1,uc003yff.1,uc003yfg.1_5end | |||
|cluster_id=chr8:93029879..93029904,- | |||
|coexpression_cluster_id=C210 | |||
|description=CAGE_peak_30_at_RUNX1T1_5end | |||
|id=chr8:93029879..93029904,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000785;7.62e-26;1!CL:0000819;7.62e-26;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,9.79e-26,1;CL:0000785,1.37e-13,2;CL:0000955,1.37e-13,2;CL:0000818,1.37e-13,2;CL:0000954,1.37e-13,2;CL:0000816,1.37e-13,2;CL:0000817,1.67e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.00e-50;2!UBERON:0006222;7.62e-26;1!CL:0000954;1.21e-13;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;7.62e-26;1!DOID:8675;7.62e-26;1!DOID:0060058;5.98e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,9.79e-26,1;DOID:8675,9.79e-26,1;DOID:0060058,6.28e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0002420!5.63e-20!9;UBERON:0007245!5.63e-20!9;UBERON:0010009!5.63e-20!9;UBERON:0010011!5.63e-20!9;UBERON:0000454!5.63e-20!9;UBERON:0009663!1.45e-19!7;UBERON:0000369!2.43e-16!4;UBERON:0002435!2.43e-16!4;UBERON:0000204!2.43e-16!4;UBERON:0010082!2.43e-16!4;UBERON:0002780!3.38e-16!41;UBERON:0001890!3.38e-16!41;UBERON:0006240!3.38e-16!41;UBERON:0003080!9.77e-16!42;UBERON:0002308!4.71e-15!9;UBERON:0000125!4.71e-15!9;UBERON:0002791!7.60e-13!33;UBERON:0005383!1.06e-12!3;UBERON:0005382!1.06e-12!3;UBERON:0001017!2.06e-12!82;UBERON:0001893!2.10e-12!34;UBERON:0005743!1.25e-11!86;UBERON:0001869!3.07e-11!32;UBERON:0001049!9.50e-11!57;UBERON:0005068!9.50e-11!57;UBERON:0006241!9.50e-11!57;UBERON:0007135!9.50e-11!57;UBERON:0002020!1.83e-10!34;UBERON:0003528!1.83e-10!34;UBERON:0003075!2.08e-10!86;UBERON:0007284!2.08e-10!86;UBERON:0002616!2.83e-10!59;UBERON:0000073!4.15e-10!94;UBERON:0001016!4.15e-10!94;UBERON:0003056!7.83e-10!61;UBERON:0002346!9.37e-10!90;UBERON:0000025!2.43e-09!194;UBERON:0001873!5.22e-09!2;UBERON:0010122!5.22e-09!2;UBERON:0001875!2.42e-08!2;UBERON:0006514!2.42e-08!2;UBERON:0000955!3.69e-08!69;UBERON:0006238!3.69e-08!69;UBERON:0002360!1.01e-07!2;UBERON:0000094!1.01e-07!2;UBERON:0007645!1.01e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;1.77e-98;4!UBERON:0002435;1.77e-98;4!UBERON:0000204;1.77e-98;4!UBERON:0009663;1.05e-87;7!UBERON:0005383;1.66e-74;3!UBERON:0005382;1.66e-74;3!UBERON:0002420;2.29e-68;9!UBERON:0000125;2.29e-68;9!UBERON:0007245;2.29e-68;9!UBERON:0002308;2.29e-68;9!UBERON:0010009;2.29e-68;9!UBERON:0010011;2.29e-68;9!UBERON:0000454;2.29e-68;9!UBERON:0001873;4.00e-50;2!UBERON:0001874;2.78e-26;1!UBERON:0001882;7.62e-26;1!UBERON:0005403;7.62e-26;1!UBERON:0002791;2.03e-19;32!UBERON:0001869;3.88e-18;32!UBERON:0003528;5.61e-18;34!UBERON:0002020;5.61e-18;34!UBERON:0002780;5.41e-17;41!UBERON:0001890;5.41e-17;41!UBERON:0001893;5.46e-16;34!UBERON:0001875;1.21e-13;2!UBERON:0006514;1.21e-13;2!UBERON:0000955;4.88e-11;68!UBERON:0000073;5.14e-10;53!UBERON:0002616;5.14e-10;53!UBERON:0001017;2.65e-09;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,8.31e-99,4;UBERON:0002435,8.31e-99,4;UBERON:0000204,8.31e-99,4;UBERON:0010082,8.31e-99,4;UBERON:0009663,6.12e-88,7;UBERON:0005383,1.29e-74,3;UBERON:0005382,1.29e-74,3;UBERON:0002420,1.51e-68,9;UBERON:0000125,1.51e-68,9;UBERON:0007245,1.51e-68,9;UBERON:0002308,1.51e-68,9;UBERON:0010009,1.51e-68,9;UBERON:0010011,1.51e-68,9;UBERON:0000454,1.51e-68,9;UBERON:0001873,3.11e-50,2;UBERON:0010122,3.11e-50,2;UBERON:0001874,2.78e-26,1;UBERON:0001882,4.61e-26,1;UBERON:0005403,4.61e-26,1;UBERON:0002780,2.72e-21,41;UBERON:0001890,2.72e-21,41;UBERON:0003080,2.72e-21,41;UBERON:0006240,2.72e-21,41;UBERON:0002791,4.86e-19,32;UBERON:0001869,4.86e-19,32;UBERON:0003528,5.68e-18,34;UBERON:0002020,5.68e-18,34;UBERON:0001893,5.68e-18,34;UBERON:0000073,1.32e-16,53;UBERON:0002616,1.32e-16,53;UBERON:0001049,9.64e-16,56;UBERON:0005068,9.64e-16,56;UBERON:0006241,9.64e-16,56;UBERON:0007135,9.64e-16,56;UBERON:0003056,1.74e-14,61;UBERON:0001875,1.21e-13,2;UBERON:0006514,1.21e-13,2;UBERON:0000955,7.60e-13,68;UBERON:0006238,7.60e-13,68;UBERON:0001017,7.53e-11,81;UBERON:0003075,7.53e-11,82;UBERON:0007284,7.53e-11,82;UBERON:0002346,2.36e-10,86;UBERON:0001016,8.55e-10,89;UBERON:0010371,1.38e-08,104;UBERON:0007023,6.57e-08,114;UBERON:0010314,8.92e-07,132 | |||
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| ||
|short_description=p30@RUNX1T1 | |||
}} | }} |
Latest revision as of 11:41, 19 September 2015
Short description: | p30@RUNX1T1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_RUNX1T1_5end |
Coexpression cluster: | C210_Burkitt_lymphoma_appendix_acute_diffuse_CD19_tonsil |
Association with transcript: | 3bp_to_NM_175636, uc003yfb.1, uc003yff.1, uc003yfg.1_5end |
EntrezGene: | RUNX1T1 |
HGNC: | 1535 |
UniProt: | Q06455Q7Z4J5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 9.79e-26 | 1 |
mature B cell | 1.37e-13 | 2 |
pre-B-II cell | 1.37e-13 | 2 |
transitional stage B cell | 1.37e-13 | 2 |
small pre-B-II cell | 1.37e-13 | 2 |
immature B cell | 1.37e-13 | 2 |
precursor B cell | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 9.79e-26 | 1 |
lymphosarcoma | 9.79e-26 | 1 |
lymphoma | 6.28e-11 | 10 |