FFCP PHASE1:Hg19::chr9:130517522..130517570,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:130517522..130517570,- to FFCP PHASE1:Hg19::chr9:130517522..130517570,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10044 | |EntrezGene=10044 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16884 | |HGNC=16884 | ||
|TSSclassifier=strong | |||
|UniProt=E9PG48,A8K5S8 | |UniProt=E9PG48,A8K5S8 | ||
|association_with_transcript=0bp_to_ENST00000373274,NM_001142534,uc010mxo.2_5end | |||
|cluster_id=chr9:130517522..130517570,- | |||
|description=CAGE_peak_3_at_SH2D3C_5end | |||
|id=chr9:130517522..130517570,- | |||
|ontology_enrichment_celltype=CL:0000540!9.52e-09!6;CL:0000031!9.52e-09!6;CL:0000404!9.52e-09!6;CL:0000047!1.08e-08!8;CL:0002322!2.25e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.23e-11;5!CL:0000540;1.53e-10;6!CL:0000404;1.53e-10;6!CL:0002321;3.54e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.15e-11,5;CL:0000047,2.98e-11,8;CL:0000540,1.35e-10,6;CL:0000031,1.35e-10,6;CL:0000404,1.35e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.01e-14;82!CL:0000031;1.53e-10;6!UBERON:0006215;7.98e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.77e-55!86;UBERON:0000073!6.39e-54!94;UBERON:0001016!6.39e-54!94;UBERON:0001017!3.71e-53!82;UBERON:0001049!1.59e-48!57;UBERON:0005068!1.59e-48!57;UBERON:0006241!1.59e-48!57;UBERON:0007135!1.59e-48!57;UBERON:0003075!1.73e-42!86;UBERON:0007284!1.73e-42!86;UBERON:0002346!2.84e-41!90;UBERON:0000955!8.21e-41!69;UBERON:0006238!8.21e-41!69;UBERON:0002616!1.86e-40!59;UBERON:0007023!1.96e-39!115;UBERON:0002780!5.90e-38!41;UBERON:0001890!5.90e-38!41;UBERON:0006240!5.90e-38!41;UBERON:0003080!9.53e-37!42;UBERON:0001893!1.07e-35!34;UBERON:0002020!1.57e-35!34;UBERON:0003528!1.57e-35!34;UBERON:0002791!2.45e-34!33;UBERON:0001869!4.62e-34!32;UBERON:0004121!3.76e-30!169;UBERON:0003056!5.25e-30!61;UBERON:0000924!6.68e-30!173;UBERON:0006601!6.68e-30!173;UBERON:0002619!2.35e-28!22;UBERON:0000956!3.58e-26!25;UBERON:0000203!3.58e-26!25;UBERON:0001950!6.22e-26!20;UBERON:0000033!1.16e-24!123;UBERON:0000153!1.87e-23!129;UBERON:0007811!1.87e-23!129;UBERON:0000025!5.44e-16!194;UBERON:0003076!1.53e-12!15;UBERON:0003057!1.53e-12!15;UBERON:0004111!6.30e-12!241;UBERON:0002420!4.69e-11!9;UBERON:0007245!4.69e-11!9;UBERON:0010009!4.69e-11!9;UBERON:0010011!4.69e-11!9;UBERON:0000454!4.69e-11!9;UBERON:0002308!1.03e-10!9;UBERON:0000125!1.03e-10!9;UBERON:0000064!3.93e-10!219;UBERON:0004733!5.62e-10!12;UBERON:0002028!5.62e-10!12;UBERON:0007277!5.62e-10!12;UBERON:0000477!1.47e-09!286;UBERON:0000200!1.48e-09!6;UBERON:0001871!3.51e-09!7;UBERON:0004732!5.28e-09!13;UBERON:0000483!6.97e-09!309;UBERON:0000922!7.07e-09!612;UBERON:0009663!1.34e-08!7;UBERON:0000119!1.34e-08!312;UBERON:0000468!1.63e-08!659;UBERON:0001872!4.20e-08!5;UBERON:0002021!7.06e-08!5;UBERON:0000349!9.71e-08!5;UBERON:0000467!3.77e-07!625;UBERON:0002680!3.85e-07!9;UBERON:0001895!3.85e-07!9;UBERON:0010092!3.85e-07!9;UBERON:0002298!3.91e-07!8;UBERON:0000480!4.39e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.05e-48;22!UBERON:0001869;8.67e-47;32!UBERON:0003528;1.70e-45;34!UBERON:0002020;1.70e-45;34!UBERON:0001893;2.01e-45;34!UBERON:0001950;1.85e-44;20!UBERON:0002791;1.61e-43;32!UBERON:0000956;2.69e-42;25!UBERON:0000203;2.69e-42;25!UBERON:0002780;6.39e-39;41!UBERON:0001890;6.39e-39;41!UBERON:0000073;1.48e-36;53!UBERON:0002616;1.48e-36;53!UBERON:0000955;2.25e-27;68!UBERON:0001017;4.84e-25;75!UBERON:0001016;3.51e-23;83!UBERON:0000200;1.90e-15;6!UBERON:0001871;4.75e-13;6!UBERON:0001872;5.62e-13;5!UBERON:0002021;1.68e-12;5!UBERON:0000349;2.68e-12;5!UBERON:0002420;6.90e-12;9!UBERON:0007245;6.90e-12;9!UBERON:0010009;6.90e-12;9!UBERON:0010011;6.90e-12;9!UBERON:0000454;6.90e-12;9!UBERON:0004733;2.04e-11;12!UBERON:0002028;2.04e-11;12!UBERON:0000125;2.16e-11;9!UBERON:0002308;2.16e-11;9!UBERON:0007023;1.35e-10;114!UBERON:0004732;2.00e-10;13!UBERON:0011216;1.04e-09;132!UBERON:0000369;1.32e-09;4!UBERON:0002435;1.32e-09;4!UBERON:0000204;1.32e-09;4!UBERON:0002680;2.69e-09;9!UBERON:0001895;2.69e-09;9!UBERON:0002298;5.89e-09;6!UBERON:0001870;1.36e-08;3!UBERON:0009663;5.61e-08;7!UBERON:0005383;1.90e-07;3!UBERON:0005382;1.90e-07;3!UBERON:0000988;3.03e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.12e-70,89;UBERON:0001017,5.70e-70,81;UBERON:0000073,3.79e-65,53;UBERON:0002616,3.79e-65,53;UBERON:0001049,3.00e-64,56;UBERON:0005068,3.00e-64,56;UBERON:0006241,3.00e-64,56;UBERON:0007135,3.00e-64,56;UBERON:0000955,6.11e-59,68;UBERON:0006238,6.11e-59,68;UBERON:0002780,9.57e-55,41;UBERON:0001890,9.57e-55,41;UBERON:0003080,9.57e-55,41;UBERON:0006240,9.57e-55,41;UBERON:0001869,1.27e-52,32;UBERON:0001893,1.51e-52,34;UBERON:0003528,2.80e-52,34;UBERON:0002020,2.80e-52,34;UBERON:0002619,1.15e-48,22;UBERON:0002791,1.62e-48,32;UBERON:0003075,1.61e-44,82;UBERON:0007284,1.61e-44,82;UBERON:0001950,2.00e-44,20;UBERON:0000956,2.93e-42,25;UBERON:0000203,2.93e-42,25;UBERON:0002346,6.87e-42,86;UBERON:0003056,4.11e-36,61;UBERON:0010371,1.78e-34,104;UBERON:0004121,8.64e-33,171;UBERON:0000924,8.64e-33,171;UBERON:0006601,8.64e-33,171;UBERON:0011216,1.26e-30,223;UBERON:0007023,1.74e-30,114;UBERON:0010314,1.47e-24,132;UBERON:0000025,1.06e-15,192;UBERON:0000200,1.90e-15,6;UBERON:0001871,4.76e-13,6;UBERON:0001872,6.28e-13,5;UBERON:0002021,1.54e-12,5;UBERON:0000349,2.68e-12,5;UBERON:0002420,5.85e-12,9;UBERON:0007245,5.85e-12,9;UBERON:0010009,5.85e-12,9;UBERON:0010011,5.85e-12,9;UBERON:0000454,5.85e-12,9;UBERON:0004733,1.69e-11,12;UBERON:0002028,1.69e-11,12;UBERON:0007277,1.69e-11,12;UBERON:0000125,1.74e-11,9;UBERON:0002308,1.74e-11,9;UBERON:0003076,3.66e-11,15;UBERON:0003057,3.66e-11,15;UBERON:0004732,1.68e-10,13;UBERON:0004111,3.45e-10,240;UBERON:0000369,1.12e-09,4;UBERON:0002435,1.12e-09,4;UBERON:0000204,1.12e-09,4;UBERON:0010082,1.12e-09,4;UBERON:0002680,2.63e-09,9;UBERON:0001895,2.63e-09,9;UBERON:0010092,2.63e-09,9;UBERON:0002298,4.73e-09,6;UBERON:0001870,1.39e-08,3;UBERON:0009663,4.83e-08,7;UBERON:0000922,1.02e-07,592;UBERON:0005383,1.66e-07,3;UBERON:0005382,1.66e-07,3;UBERON:0000988,3.00e-07,3;UBERON:0000483,3.84e-07,306;UBERON:0000119,5.79e-07,309 | |||
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| ||
|short_description=p3@SH2D3C | |||
}} | }} |
Latest revision as of 05:04, 25 September 2015
Short description: | p3@SH2D3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SH2D3C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000373274, NM_001142534, uc010mxo.2_5end |
EntrezGene: | SH2D3C |
HGNC: | 16884 |
UniProt: | E9PG48A8K5S8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.15e-11 | 5 |
neuronal stem cell | 2.98e-11 | 8 |
neuron | 1.35e-10 | 6 |
neuroblast | 1.35e-10 | 6 |
electrically signaling cell | 1.35e-10 | 6 |