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FFCP PHASE1:Hg19::chr9:140064496..140064510,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:140064496..140064510,-
|DHSsupport=supported 
|short_description=p1@LRRC26
|DPIdataset=robust
|description=CAGE_peak_1_at_LRRC26_5end
|association_with_transcript=0bp_to_ENST00000371542_5end
|EntrezGene=389816
|EntrezGene=389816
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=31409
|HGNC=31409
|TSSclassifier=strong
|UniProt=Q2I0M4
|UniProt=Q2I0M4
|association_with_transcript=0bp_to_ENST00000371542_5end
|cluster_id=chr9:140064496..140064510,-
|coexpression_cluster_id=C37
|description=CAGE_peak_1_at_LRRC26_5end
|id=chr9:140064496..140064510,-
|ontology_enrichment_celltype=CL:0000784!5.40e-07!3
|ontology_enrichment_celltype_v019=CL:0000784;4.54e-13;3
|ontology_enrichment_celltype_v019_2=CL:0000784,4.45e-13,3
|ontology_enrichment_development_v019=UBERON:0006595;7.31e-07;86
|ontology_enrichment_disease=DOID:5093!2.34e-08!4;DOID:1612!2.34e-08!4
|ontology_enrichment_disease_v019=DOID:5093;5.79e-16;4!DOID:1612;5.79e-16;4
|ontology_enrichment_disease_v019_2=DOID:5093,5.91e-16,4;DOID:1612,5.91e-16,4
|ontology_enrichment_uberon=UBERON:0004921!1.10e-13!129;UBERON:0004185!1.10e-13!129;UBERON:0004119!2.23e-12!169;UBERON:0000925!2.23e-12!169;UBERON:0006595!2.23e-12!169;UBERON:0001007!1.52e-11!155;UBERON:0001555!1.52e-11!155;UBERON:0007026!1.52e-11!155;UBERON:0007023!1.78e-10!115;UBERON:0000077!1.60e-08!130;UBERON:0001041!2.00e-07!98
|ontology_enrichment_uberon_v019=UBERON:0004921;5.07e-17;33!UBERON:0005409;2.80e-12;22!UBERON:0000160;5.32e-10;17!UBERON:0001041;9.48e-10;14!UBERON:0001829;1.01e-09;2!UBERON:0000310;1.22e-09;10!UBERON:0003127;1.41e-09;2!UBERON:0000341;4.98e-09;2!UBERON:0001443;9.79e-09;11!UBERON:0001555;1.53e-08;54!UBERON:0002108;1.03e-07;4!UBERON:0001155;2.41e-07;9!UBERON:0001044;4.67e-07;6!UBERON:0003293;4.67e-07;6!UBERON:0003294;4.67e-07;6!UBERON:0010047;4.67e-07;6!UBERON:0003408;4.67e-07;6!UBERON:0000167;4.67e-07;6
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.39e-14,118;UBERON:0007023,7.59e-13,114;UBERON:0001007,7.02e-12,145;UBERON:0001555,7.02e-12,145;UBERON:0007026,7.02e-12,145;UBERON:0005409,1.15e-10,25;UBERON:0004119,3.29e-10,160;UBERON:0000925,3.29e-10,160;UBERON:0006595,3.29e-10,160;UBERON:0000160,5.29e-10,17;UBERON:0001829,1.01e-09,2;UBERON:0000310,1.25e-09,10;UBERON:0003127,1.41e-09,2;UBERON:0000341,4.79e-09,2;UBERON:0001443,1.00e-08,11;UBERON:0000915,3.83e-08,52;UBERON:0002108,1.01e-07,4;UBERON:0000161,1.32e-07,36;UBERON:0001155,2.43e-07,9;UBERON:0001044,4.67e-07,6;UBERON:0003293,4.67e-07,6;UBERON:0003294,4.67e-07,6;UBERON:0010047,4.67e-07,6;UBERON:0000167,4.67e-07,6;UBERON:0001041,7.83e-07,87
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|short_description=p1@LRRC26
}}
}}

Latest revision as of 16:11, 16 September 2015

Short description:p1@LRRC26
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_LRRC26_5end
Coexpression cluster:C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea
Association with transcript: 0bp_to_ENST00000371542_5end
EntrezGene:LRRC26
HGNC: 31409
UniProt: Q2I0M4
Genome view:ZENBU


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CAGE Expression




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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data