FFCP PHASE1:Hg19::chr9:38437690..38437712,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:38437690..38437712,+ | |||
|coexpression_cluster_id=C318 | |||
|description=CAGE_peak_at_chr9:38437690..38437712,+ | |||
|id=chr9:38437690..38437712,+ | |||
|ontology_enrichment_celltype=CL:0002620!9.27e-10!23;CL:0000057!1.55e-09!75;CL:0000223!1.23e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002563;6.42e-18;4!CL:0000182;4.68e-16;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.49e-18,4;CL:0000182,5.23e-16,12;CL:0000223,9.20e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.13e-24;11!UBERON:0009497;8.13e-21;13!UBERON:0003104;7.80e-11;31!UBERON:0008425;1.88e-09;1!UBERON:0006242;6.98e-09;1!UBERON:0001041;8.01e-09;30!CL:0000223;3.69e-07;58 | |||
|ontology_enrichment_disease=DOID:17!4.53e-08!5;DOID:450!4.53e-08!5;DOID:66!4.53e-08!5;DOID:423!4.53e-08!5;DOID:0080000!4.53e-08!5;DOID:11722!4.53e-08!5;DOID:7!1.70e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:4235;3.05e-09;1!DOID:2513;6.98e-09;1!DOID:7;6.77e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,3.88e-09,1;DOID:2513,4.54e-09,1;DOID:7,8.17e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0003929!2.19e-14!54;UBERON:0002417!1.94e-11!61;UBERON:0000916!1.94e-11!61;UBERON:0009497!1.08e-10!25;UBERON:0000015!1.08e-10!25;UBERON:0002423!1.08e-10!25;UBERON:0006235!1.08e-10!25;UBERON:0004161!1.08e-10!25;UBERON:0004119!1.96e-10!169;UBERON:0000925!1.96e-10!169;UBERON:0006595!1.96e-10!169;UBERON:0001007!1.16e-09!155;UBERON:0001555!1.16e-09!155;UBERON:0007026!1.16e-09!155;UBERON:0005911!1.80e-09!82;UBERON:0000475!2.96e-09!365;UBERON:0009569!4.76e-09!113;UBERON:0005172!5.80e-09!55;UBERON:0005173!5.80e-09!55;UBERON:0002100!1.06e-08!216;UBERON:0007499!9.66e-08!25;UBERON:0008835!1.14e-07!22;UBERON:0003894!1.14e-07!22;UBERON:0009856!2.50e-07!26;UBERON:0009854!3.23e-07!23;UBERON:0000077!3.55e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;6.42e-18;4!UBERON:0001262;6.42e-18;4!UBERON:0004786;6.42e-18;4!UBERON:0004808;6.42e-18;4!UBERON:0001277;6.42e-18;4!UBERON:0002423;2.12e-14;25!UBERON:0002107;2.76e-14;19!UBERON:0006925;2.76e-14;19!UBERON:0002365;4.43e-11;31!UBERON:0002330;4.43e-11;31!UBERON:0000485;1.77e-10;7!UBERON:0003929;1.77e-10;7!UBERON:0003350;3.13e-09;8!UBERON:0002368;6.60e-08;33!UBERON:0000160;4.58e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,3.49e-18,4;UBERON:0001262,3.49e-18,4;UBERON:0004786,3.49e-18,4;UBERON:0004808,3.49e-18,4;UBERON:0001277,3.49e-18,4;UBERON:0003929,1.98e-15,54;UBERON:0009497,2.26e-14,25;UBERON:0000015,2.26e-14,25;UBERON:0002423,2.26e-14,25;UBERON:0006235,2.26e-14,25;UBERON:0004161,2.26e-14,25;UBERON:0002107,2.86e-14,19;UBERON:0006925,2.86e-14,19;UBERON:0008836,2.86e-14,19;UBERON:0008835,2.93e-12,22;UBERON:0003894,2.93e-12,22;UBERON:0009854,1.05e-11,23;UBERON:0002365,1.44e-11,31;UBERON:0002330,1.44e-11,31;UBERON:0005911,1.78e-11,82;UBERON:0007499,9.94e-11,25;UBERON:0009856,2.69e-10,26;UBERON:0003350,2.32e-09,8;UBERON:0002417,4.24e-09,60;UBERON:0000916,4.24e-09,60;UBERON:0000485,2.26e-08,9;UBERON:0005172,4.32e-08,54;UBERON:0005173,4.32e-08,54;UBERON:0002368,1.62e-07,35;UBERON:0002530,2.29e-07,59;UBERON:0004921,2.70e-07,118;UBERON:0000160,3.80e-07,17;UBERON:0004119,6.75e-07,160;UBERON:0000925,6.75e-07,160;UBERON:0006595,6.75e-07,160 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,2.09340350391728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0.438977620880838,0.919463387397059,0.150238058906597,0,1.25572744982203,0.213557388818567,0.423863802319124,0.300091096084402,0.103052529238439,0.257640540045629,0,0.506328996723799,0.68205903612839,1.26216887122057,0.552299391853796,0,2.13005755509969,1.5112814734146,0.339121184620975,0.193260853163297,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0.982827216677626,0,0,3.19769940212095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.496215615637554,0.767309866440312,0.561320188866147,2.17836553734692,0.511707249066704,0.160853921143607,0,0,0,0,0,0,1.81289174387433,0.40101294060657,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768760269460425,3.31793052485919,0.2023155617111,0.929691098594572,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,1.86623752597084,0.179736702294654,0.537063524026827,0,0,0,0,0,0.0927680981618513,0,0,4.54791999980218,0,0.227586896570999,0,0,0,0,0,0,0,0,0.331737779793674,0,0.438770794307945,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,1.97894300007517,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0.505492637027904,0,0,0,0,0.313932918407225,0,0,0,0,0,0.174118413160805,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0.391102765469606,0.160317640503067,1.28071796843612,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57566364614447,1.07140615895516,1.61768505250044,95.9667944768801,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0.566560457600628,0.293104467356165,2.65013777824443,0,0,2.73738940614927,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0,1.8374728641192,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,1.1441462864015,0,0,0,0.80682027481408,0.781514011233092,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.333694205676207,0.313972371402056,0.157115589916002,0,0,0.863710364874486,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0,2.0391253762538,0,0.128915775947154,0,1.2498775702396,0,0,0,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,2.09340350391728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0.438977620880838,0.919463387397059,0.150238058906597,0,1.25572744982203,0.213557388818567,0.423863802319124,0.300091096084402,0.103052529238439,0.257640540045629,0,0.506328996723799,0.68205903612839,1.26216887122057,0.552299391853796,0,2.13005755509969,1.5112814734146,0.339121184620975,0.193260853163297,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0.982827216677626,0,0,3.19769940212095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.496215615637554,0.767309866440312,0.561320188866147,2.17836553734692,0.511707249066704,0.160853921143607,0,0,0,0,0,0,1.81289174387433,0.40101294060657,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768760269460425,3.31793052485919,0.2023155617111,0.929691098594572,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,1.86623752597084,0.179736702294654,0.537063524026827,0,0,0,0,0,0.0927680981618513,0,0,4.54791999980218,0,0.227586896570999,0,0,0,0,0,0,0,0,0.331737779793674,0,0.438770794307945,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,1.97894300007517,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0.505492637027904,0,0,0,0,0.313932918407225,0,0,0,0,0,0.174118413160805,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0.391102765469606,0.160317640503067,1.28071796843612,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57566364614447,1.07140615895516,1.61768505250044,95.9667944768801,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0.566560457600628,0.293104467356165,2.65013777824443,0,0,2.73738940614927,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0,1.8374728641192,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,1.1441462864015,0,0,0,0.80682027481408,0.781514011233092,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.333694205676207,0.313972371402056,0.157115589916002,0,0,0.863710364874486,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0,2.0391253762538,0,0.128915775947154,0,1.2498775702396,0,0,0,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:38437690..38437712,+ | |||
}} | }} |
Latest revision as of 02:04, 1 August 2015
Short description: | p@chr9:38437690..38437712, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:38437690..38437712, + |
Coexpression cluster: | C318_hepatoma_Intestinal_bile_small_colon_Prostate_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.49e-18 | 4 |
hepatocyte | 5.23e-16 | 12 |
endodermal cell | 9.20e-12 | 58 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 3.88e-09 | 1 |
basal cell carcinoma | 4.54e-09 | 1 |
disease of anatomical entity | 8.17e-09 | 39 |